Enrichment in phenotype: CTL (67 samples)
- 2761 / 6071 gene sets are upregulated in phenotype CTL
- 654 gene sets are significant at FDR < 25%
- 407 gene sets are significantly enriched at nominal pvalue < 1%
- 703 gene sets are significantly enriched at nominal pvalue < 5%
- Snapshot of enrichment results
- Detailed enrichment results in html format
- Detailed enrichment results in excel format (tab delimited text)
- Guide to interpret results
Enrichment in phenotype: AD (49 samples)
- 3310 / 6071 gene sets are upregulated in phenotype AD
- 712 gene sets are significantly enriched at FDR < 25%
- 266 gene sets are significantly enriched at nominal pvalue < 1%
- 683 gene sets are significantly enriched at nominal pvalue < 5%
- Snapshot of enrichment results
- Detailed enrichment results in html format
- Detailed enrichment results in excel format (tab delimited text)
- Guide to interpret results
Dataset details
- The dataset has 38323 features (genes)
- No probe set => gene symbol collapsing was requested, so all 38323 features were used
Gene set details
- Gene set size filters (min=2, max=50000) resulted in filtering out 8 / 6079 gene sets
- The remaining 6071 gene sets were used in the analysis
- List of gene sets used and their sizes (restricted to features in the specified dataset)
Gene markers for the CTL versus AD comparison
- The dataset has 38323 features (genes)
- # of markers for phenotype CTL: 17670 (46.1% ) with correlation area 50.1%
- # of markers for phenotype AD: 20653 (53.9% ) with correlation area 49.9%
- Detailed rank ordered gene list for all features in the dataset
- Heat map and gene list correlation profile for all features in the dataset
- Buttefly plot of significant genes
Global statistics and plots
Comments
- Timestamp used as random seed: 1522624768828