Dataset | gse25507_collapsed_to_symbols.gse25507.gpl570.cls #N_versus_Y.gse25507.gpl570.cls #N_versus_Y_repos |
Phenotype | gse25507.gpl570.cls#N_versus_Y_repos |
Upregulated in class | Y |
GeneSet | PHOTOTRANSDUCTION |
Enrichment Score (ES) | -0.4675881 |
Normalized Enrichment Score (NES) | -1.7922312 |
Nominal p-value | 0.003960396 |
FDR q-value | 0.4666552 |
FWER p-Value | 0.943 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | PLB1 | PLB1 Entrez,  Source | phospholipase B1 | 2592 | 0.097 | -0.1114 | No |
2 | METAP2 | METAP2 Entrez,  Source | methionyl aminopeptidase 2 | 2803 | 0.092 | -0.1074 | No |
3 | APOM | APOM Entrez,  Source | apolipoprotein M | 3123 | 0.085 | -0.1098 | No |
4 | RBP3 | RBP3 Entrez,  Source | retinol binding protein 3, interstitial | 3504 | 0.078 | -0.1163 | No |
5 | SDC2 | SDC2 Entrez,  Source | syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan) | 4106 | 0.066 | -0.1354 | No |
6 | AKR1C4 | AKR1C4 Entrez,  Source | aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4) | 4141 | 0.065 | -0.1269 | No |
7 | RDH10 | RDH10 Entrez,  Source | retinol dehydrogenase 10 (all-trans) | 4200 | 0.064 | -0.1198 | No |
8 | LRP8 | LRP8 Entrez,  Source | low density lipoprotein receptor-related protein 8, apolipoprotein e receptor | 4230 | 0.063 | -0.1114 | No |
9 | LRP1 | LRP1 Entrez,  Source | low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) | 4681 | 0.056 | -0.1247 | No |
10 | CYP4V2 | CYP4V2 Entrez,  Source | cytochrome P450, family 4, subfamily V, polypeptide 2 | 5317 | 0.046 | -0.1484 | No |
11 | PRKCA | PRKCA Entrez,  Source | protein kinase C, alpha | 5395 | 0.045 | -0.1452 | No |
12 | FNTB | FNTB Entrez,  Source | farnesyltransferase, CAAX box, beta | 5552 | 0.043 | -0.1462 | No |
13 | GUCA1B | GUCA1B Entrez,  Source | guanylate cyclase activator 1B (retina) | 5682 | 0.041 | -0.1462 | No |
14 | GUCY2D | GUCY2D Entrez,  Source | guanylate cyclase 2D, membrane (retina-specific) | 6381 | 0.032 | -0.1754 | No |
15 | TRPC3 | TRPC3 Entrez,  Source | transient receptor potential cation channel, subfamily C, member 3 | 6425 | 0.031 | -0.1727 | No |
16 | UNC119 | UNC119 Entrez,  Source | unc-119 homolog (C. elegans) | 6787 | 0.026 | -0.1862 | No |
17 | GRK4 | GRK4 Entrez,  Source | G protein-coupled receptor kinase 4 | 7387 | 0.019 | -0.2125 | No |
18 | SLC24A1 | SLC24A1 Entrez,  Source | solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 | 7775 | 0.014 | -0.2293 | No |
19 | NMT2 | NMT2 Entrez,  Source | N-myristoyltransferase 2 | 7886 | 0.012 | -0.2328 | No |
20 | RDH8 | RDH8 Entrez,  Source | retinol dehydrogenase 8 (all-trans) | 8037 | 0.010 | -0.2385 | No |
21 | SDC4 | SDC4 Entrez,  Source | syndecan 4 (amphiglycan, ryudocan) | 8219 | 0.008 | -0.2461 | No |
22 | GNB1 | GNB1 Entrez,  Source | guanine nucleotide binding protein (G protein), beta polypeptide 1 | 8562 | 0.004 | -0.2622 | No |
23 | LRAT | LRAT Entrez,  Source | lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) | 8590 | 0.003 | -0.2630 | No |
24 | FNTA | FNTA Entrez,  Source | farnesyltransferase, CAAX box, alpha | 8619 | 0.003 | -0.2639 | No |
25 | GNA11 | GNA11 Entrez,  Source | guanine nucleotide binding protein (G protein), alpha 11 (Gq class) | 8673 | 0.002 | -0.2661 | No |
26 | SDC3 | SDC3 Entrez,  Source | syndecan 3 (N-syndecan) | 8922 | -0.000 | -0.2781 | No |
27 | STRA6 | STRA6 Entrez,  Source | stimulated by retinoic acid gene 6 homolog (mouse) | 8962 | -0.001 | -0.2799 | No |
28 | SAG | SAG Entrez,  Source | S-antigen; retina and pineal gland (arrestin) | 9054 | -0.002 | -0.2840 | No |
29 | PNLIP | PNLIP Entrez,  Source | pancreatic lipase | 9365 | -0.005 | -0.2982 | No |
30 | GPC5 | GPC5 Entrez,  Source | glypican 5 | 9471 | -0.007 | -0.3023 | No |
31 | LDLR | LDLR Entrez,  Source | low density lipoprotein receptor (familial hypercholesterolemia) | 9530 | -0.007 | -0.3041 | No |
32 | RGS9BP | RGS9BP Entrez,  Source | regulator of G protein signalling 9 binding protein | 9550 | -0.007 | -0.3038 | No |
33 | RLBP1 | RLBP1 Entrez,  Source | retinaldehyde binding protein 1 | 9868 | -0.011 | -0.3176 | No |
34 | GNAQ | GNAQ Entrez,  Source | guanine nucleotide binding protein (G protein), q polypeptide | 9931 | -0.011 | -0.3189 | No |
35 | RBP4 | RBP4 Entrez,  Source | retinol binding protein 4, plasma | 9987 | -0.012 | -0.3197 | No |
36 | RP1 | RP1 Entrez,  Source | retinitis pigmentosa 1 (autosomal dominant) | 10285 | -0.015 | -0.3318 | No |
37 | CNGA1 | CNGA1 Entrez,  Source | cyclic nucleotide gated channel alpha 1 | 10447 | -0.017 | -0.3369 | No |
38 | NMT1 | NMT1 Entrez,  Source | N-myristoyltransferase 1 | 10563 | -0.019 | -0.3397 | No |
39 | CALM1 | CALM1 Entrez,  Source | calmodulin 1 (phosphorylase kinase, delta) | 10628 | -0.019 | -0.3398 | No |
40 | RDH11 | RDH11 Entrez,  Source | retinol dehydrogenase 11 (all-trans/9-cis/11-cis) | 10643 | -0.020 | -0.3374 | No |
41 | SDC1 | SDC1 Entrez,  Source | syndecan 1 | 11322 | -0.027 | -0.3662 | No |
42 | OPN4 | OPN4 Entrez,  Source | opsin 4 (melanopsin) | 11597 | -0.031 | -0.3749 | No |
43 | APOE | APOE Entrez,  Source | apolipoprotein E | 11705 | -0.032 | -0.3752 | No |
44 | GNB5 | GNB5 Entrez,  Source | guanine nucleotide binding protein (G protein), beta 5 | 12657 | -0.042 | -0.4151 | No |
45 | PDE6G | PDE6G Entrez,  Source | phosphodiesterase 6G, cGMP-specific, rod, gamma | 12768 | -0.043 | -0.4137 | No |
46 | HSPG2 | HSPG2 Entrez,  Source | heparan sulfate proteoglycan 2 (perlecan) | 13070 | -0.046 | -0.4212 | No |
47 | OPN1SW | OPN1SW Entrez,  Source | opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) | 13163 | -0.048 | -0.4183 | No |
48 | GPC3 | GPC3 Entrez,  Source | glypican 3 | 13576 | -0.052 | -0.4304 | No |
49 | LRP2 | LRP2 Entrez,  Source | low density lipoprotein-related protein 2 | 13809 | -0.054 | -0.4333 | No |
50 | PPEF1 | PPEF1 Entrez,  Source | protein phosphatase, EF-hand calcium binding domain 1 | 14300 | -0.060 | -0.4478 | No |
51 | TTR | TTR Entrez,  Source | transthyretin (prealbumin, amyloidosis type I) | 14523 | -0.063 | -0.4489 | No |
52 | PDE6A | PDE6A Entrez,  Source | phosphodiesterase 6A, cGMP-specific, rod, alpha | 14877 | -0.067 | -0.4557 | No |
53 | CHRM1 | CHRM1 Entrez,  Source | cholinergic receptor, muscarinic 1 | 15122 | -0.070 | -0.4567 | Yes |
54 | APOA2 | APOA2 Entrez,  Source | apolipoprotein A-II | 15193 | -0.071 | -0.4491 | Yes |
55 | GPC4 | GPC4 Entrez,  Source | glypican 4 | 15233 | -0.072 | -0.4399 | Yes |
56 | PDC | PDC Entrez,  Source | phosducin | 15498 | -0.075 | -0.4411 | Yes |
57 | RBP1 | RBP1 Entrez,  Source | retinol binding protein 1, cellular | 15710 | -0.078 | -0.4392 | Yes |
58 | GUCY2F | GUCY2F Entrez,  Source | guanylate cyclase 2F, retinal | 15774 | -0.079 | -0.4301 | Yes |
59 | RHO | RHO Entrez,  Source | rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant) | 15830 | -0.080 | -0.4204 | Yes |
60 | METAP1 | METAP1 Entrez,  Source | methionyl aminopeptidase 1 | 16000 | -0.082 | -0.4158 | Yes |
61 | RPE65 | RPE65 Entrez,  Source | retinal pigment epithelium-specific protein 65kDa | 16030 | -0.083 | -0.4044 | Yes |
62 | GUCA1A | GUCA1A Entrez,  Source | guanylate cyclase activator 1A (retina) | 16032 | -0.083 | -0.3917 | Yes |
63 | CNGB1 | CNGB1 Entrez,  Source | cyclic nucleotide gated channel beta 1 | 16291 | -0.086 | -0.3909 | Yes |
64 | RCVRN | RCVRN Entrez,  Source | recoverin | 16460 | -0.089 | -0.3853 | Yes |
65 | GUCA1C | GUCA1C Entrez,  Source | guanylate cyclase activator 1C | 16462 | -0.089 | -0.3716 | Yes |
66 | GNGT1 | GNGT1 Entrez,  Source | guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 | 16470 | -0.089 | -0.3582 | Yes |
67 | RDH12 | RDH12 Entrez,  Source | retinol dehydrogenase 12 (all-trans/9-cis/11-cis) | 16695 | -0.093 | -0.3548 | Yes |
68 | NR2E3 | NR2E3 Entrez,  Source | nuclear receptor subfamily 2, group E, member 3 | 16754 | -0.093 | -0.3432 | Yes |
69 | APOC2 | APOC2 Entrez,  Source | apolipoprotein C-II | 17026 | -0.098 | -0.3413 | Yes |
70 | GPC1 | GPC1 Entrez,  Source | glypican 1 | 17530 | -0.106 | -0.3495 | Yes |
71 | RBP2 | RBP2 Entrez,  Source | retinol binding protein 2, cellular | 17713 | -0.109 | -0.3415 | Yes |
72 | GPC2 | GPC2 Entrez,  Source | glypican 2 (cerebroglycan) | 17887 | -0.112 | -0.3326 | Yes |
73 | AKR1C1 | AKR1C1 Entrez,  Source | aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase) | 17952 | -0.113 | -0.3182 | Yes |
74 | AKR1B10 | AKR1B10 Entrez,  Source | aldo-keto reductase family 1, member B10 (aldose reductase) | 18125 | -0.117 | -0.3086 | Yes |
75 | APOB | APOB Entrez,  Source | apolipoprotein B (including Ag(x) antigen) | 18249 | -0.119 | -0.2961 | Yes |
76 | APOC3 | APOC3 Entrez,  Source | apolipoprotein C-III | 18608 | -0.127 | -0.2940 | Yes |
77 | GRK1 | GRK1 Entrez,  Source | G protein-coupled receptor kinase 1 | 18652 | -0.128 | -0.2763 | Yes |
78 | LPL | LPL Entrez,  Source | lipoprotein lipase | 18752 | -0.130 | -0.2610 | Yes |
79 | APOA4 | APOA4 Entrez,  Source | apolipoprotein A-IV | 18900 | -0.134 | -0.2475 | Yes |
80 | CLPS | CLPS Entrez,  Source | colipase, pancreatic | 18985 | -0.136 | -0.2305 | Yes |
81 | PITPNM1 | PITPNM1 Entrez,  Source | phosphatidylinositol transfer protein, membrane-associated 1 | 19008 | -0.137 | -0.2105 | Yes |
82 | GPC6 | GPC6 Entrez,  Source | glypican 6 | 19307 | -0.146 | -0.2024 | Yes |
83 | PDE6B | PDE6B Entrez,  Source | phosphodiesterase 6B, cGMP-specific, rod, beta (congenital stationary night blindness 3, autosomal dominant) | 19391 | -0.149 | -0.1834 | Yes |
84 | GNAT1 | GNAT1 Entrez,  Source | guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 | 19570 | -0.156 | -0.1680 | Yes |
85 | RGS9 | RGS9 Entrez,  Source | regulator of G-protein signalling 9 | 19644 | -0.159 | -0.1470 | Yes |
86 | ABCA4 | ABCA4 Entrez,  Source | ATP-binding cassette, sub-family A (ABC1), member 4 | 19805 | -0.166 | -0.1291 | Yes |
87 | RDH5 | RDH5 Entrez,  Source | retinol dehydrogenase 5 (11-cis/9-cis) | 19875 | -0.170 | -0.1062 | Yes |
88 | APOA1 | APOA1 Entrez,  Source | apolipoprotein A-I | 20163 | -0.190 | -0.0909 | Yes |
89 | PRKCQ | PRKCQ Entrez,  Source | protein kinase C, theta | 20368 | -0.215 | -0.0676 | Yes |
90 | AKR1C3 | AKR1C3 Entrez,  Source | aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) | 20499 | -0.239 | -0.0369 | Yes |
91 | DHRS3 | DHRS3 Entrez,  Source | dehydrogenase/reductase (SDR family) member 3 | 20576 | -0.272 | 0.0014 | Yes |