Datasetgse25507_collapsed_to_symbols.gse25507.gpl570.cls
#N_versus_Y.gse25507.gpl570.cls
#N_versus_Y_repos
Phenotypegse25507.gpl570.cls#N_versus_Y_repos
Upregulated in classY
GeneSetORGAN INDUCTION
Enrichment Score (ES)-0.6263131
Normalized Enrichment Score (NES)-1.8367096
Nominal p-value0.004
FDR q-value0.60531837
FWER p-Value0.849
Table: GSEA Results Summary



Fig 1: Enrichment plot: ORGAN INDUCTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FGF8FGF8
Entrez,  Source
fibroblast growth factor 8 (androgen-induced)36730.074-0.1362No
2BMP2BMP2
Entrez,  Source
bone morphogenetic protein 267440.027-0.2701No
3FGF3FGF3
Entrez,  Source
fibroblast growth factor 3 (murine mammary tumor virus integration site (v-int-2) oncogene homolog)74280.018-0.2932No
4FGFR4FGFR4
Entrez,  Source
fibroblast growth factor receptor 49817-0.010-0.4034No
5SPRY1SPRY1
Entrez,  Source
sprouty homolog 1, antagonist of FGF signaling (Drosophila)10279-0.015-0.4171No
6CTNNB1CTNNB1
Entrez,  Source
catenin (cadherin-associated protein), beta 1, 88kDa10517-0.018-0.4183No
7WNT2BWNT2B
Entrez,  Source
wingless-type MMTV integration site family, member 2B10981-0.023-0.4275No
8HOXD11HOXD11
Entrez,  Source
homeobox D1113414-0.050-0.5172No
9GDNFGDNF
Entrez,  Source
glial cell derived neurotrophic factor14463-0.062-0.5327No
10FRS2FRS2
Entrez,  Source
fibroblast growth factor receptor substrate 216392-0.088-0.5765Yes
11FGF10FGF10
Entrez,  Source
fibroblast growth factor 1016792-0.094-0.5425Yes
12SIX1SIX1
Entrez,  Source
sine oculis homeobox homolog 1 (Drosophila)17502-0.105-0.5174Yes
13HOXC11HOXC11
Entrez,  Source
homeobox C1117796-0.110-0.4689Yes
14WNT2WNT2
Entrez,  Source
wingless-type MMTV integration site family member 218355-0.122-0.4270Yes
15FGFR1FGFR1
Entrez,  Source
fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome)18998-0.136-0.3808Yes
16BMP4BMP4
Entrez,  Source
bone morphogenetic protein 419084-0.139-0.3061Yes
17FGF2FGF2
Entrez,  Source
fibroblast growth factor 2 (basic)19842-0.168-0.2477Yes
18HOXA11HOXA11
Entrez,  Source
homeobox A1120400-0.219-0.1505Yes
19FGF1FGF1
Entrez,  Source
fibroblast growth factor 1 (acidic)20585-0.2830.0010Yes
Table: GSEA details [plain text format]



Fig 2: ORGAN INDUCTION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ORGAN INDUCTION: Random ES distribution   
Gene set null distribution of ES for ORGAN INDUCTION