Enrichment in phenotype: normal (12 samples)
- 325 / 6079 gene sets are upregulated in phenotype normal
- 0 gene sets are significant at FDR < 25%
- 0 gene sets are significantly enriched at nominal pvalue < 1%
- 0 gene sets are significantly enriched at nominal pvalue < 5%
- Snapshot of enrichment results
- Detailed enrichment results in html format
- Detailed enrichment results in excel format (tab delimited text)
- Guide to interpret results
Enrichment in phenotype: copd (15 samples)
- 5754 / 6079 gene sets are upregulated in phenotype copd
- 0 gene sets are significantly enriched at FDR < 25%
- 39 gene sets are significantly enriched at nominal pvalue < 1%
- 191 gene sets are significantly enriched at nominal pvalue < 5%
- Snapshot of enrichment results
- Detailed enrichment results in html format
- Detailed enrichment results in excel format (tab delimited text)
- Guide to interpret results
Dataset details
- The dataset has 54675 features (genes)
- No probe set => gene symbol collapsing was requested, so all 54675 features were used
Gene set details
- Gene set size filters (min=2, max=50000) resulted in filtering out 0 / 6079 gene sets
- The remaining 6079 gene sets were used in the analysis
- List of gene sets used and their sizes (restricted to features in the specified dataset)
Gene markers for the normal versus copd comparison
- The dataset has 54675 features (genes)
- # of markers for phenotype normal: 3352 (6.1% ) with correlation area 3.0%
- # of markers for phenotype copd: 51323 (93.9% ) with correlation area 97.0%
- Detailed rank ordered gene list for all features in the dataset
- Heat map and gene list correlation profile for all features in the dataset
- Buttefly plot of significant genes
Global statistics and plots
Comments
- Timestamp used as random seed: 1522627045270