<body><h2 alignment: center> BPMs </h2><br/><h3>Prune Cut-Off: 0.5</h3><br/><br/> <p><FONT face="Verdana" size="1">Current BPM 0<br/>-----Knockout Gene:YER016W (BIM1)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6260<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YML124C(TUB3) -0.111 1534 4726 YGL252C(RTG2) 0.034 1908 4352<br/><u>YER016W</u>(<u>BIM1</u>) -0.823 10 6250 <span style='background:yellow;'>YML041C(VPS71) 0.070 3500 2760</span><br/> <span style='background:yellow;'>YAL011W(SWC3) -0.112 4770 1490</span><br/> YLR085C(ARP6) -0.023 1315 4945<br/> YOL012C(HTZ1) 0.004 266 5994<br/><br/><br/>ES Random Genesets = [0.75814696485623001] ES Random KOs = [0.75814696485623001] ES Random Genesets = [0.26239652749155223] ES Random KOs = [0.26239652749155223]<br/><br/>p Random Genesets = 0.0 p Random KOs = 0.0 p Random Genesets = 0.8 p Random KOs = 0.64 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 1<br/>-----Knockout Gene:YBR245C (ISW1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6226<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YKL079W(SMY1) -0.098 626 5600 YDL040C(NAT1) 0.011 1127 5099<br/>YPL106C(SSE1) 0.003 5987 239 <span style='background:yellow;'>YHR013C(ARD1) 0.044 3824 2402</span><br/>YHR178W(STB5) 0.020 4338 1888 YHR023W(MYO1) 0.003 351 5875<br/>YBR200W(BEM1) -0.076 1077 5149<br/>YNL084C(END3) 0.038 2864 3362<br/><u>YBR245C</u>(<u>ISW1</u>) -0.700 8 6218<br/>YOR181W(LAS17) -0.027 3745 2481<br/>YMR287C(DSS1) -0.099 614 5612<br/>YGR188C(BUB1) 0.042 2606 3620<br/>YOR035C(SHE4) -0.068 1313 4913<br/>YCR009C(RVS161) 0.008 5508 718<br/>YDR388W(RVS167) 0.069 1285 4941<br/>YFR010W(UBP6) -0.004 5873 353<br/>YLL021W(SPA2) -0.057 1777 4449<br/>YBR278W(DPB3) -0.030 3495 2731<br/>YJR139C(HOM6) 0.018 4523 1703<br/>YLR337C(VRP1) 0.027 3745 2481<br/>YBR260C(RGD1) -0.057 1777 4449<br/>YMR032W(HOF1) 0.049 2184 4042<br/>YLR357W(RSC2) -0.016 4706 1520<br/>YOR326W(MYO2) -0.007 5606 620<br/>YDL002C(NHP10) -0.099 614 5612<br/><br/><br/>ES Random Genesets = [0.32629096372969368] ES Random KOs = [0.32629096372969368] ES Random Genesets = [-0.3858014776742692] ES Random KOs = [-0.3858014776742692]<br/><br/>p Random Genesets = 0.64 p Random KOs = 0.48 p Random Genesets = 0.8 p Random KOs = 0.74 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YOR035C (SHE4)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YKL079W(SMY1) 0.136 1581 4647 <span style='background:yellow;'>YDL040C(NAT1) -0.095 3822 2406</span><br/>YPL106C(SSE1) -0.205 775 5453 <span style='background:yellow;'>YHR013C(ARD1) -0.177 5196 1032</span><br/>YHR178W(STB5) -0.067 3250 2978 YHR023W(MYO1) -0.005 286 5942<br/>YBR200W(BEM1) -0.156 1291 4937<br/>YNL084C(END3) 0.191 895 5333<br/>YBR245C(ISW1) -0.092 2523 3705<br/>YOR181W(LAS17) -0.012 5612 616<br/>YMR287C(DSS1) -0.069 3173 3055<br/>YGR188C(BUB1) -0.059 3511 2717<br/><u>YOR035C</u>(<u>SHE4</u>) -0.921 9 6219<br/>YCR009C(RVS161) 0.124 1776 4452<br/>YDR388W(RVS167) 0.060 3472 2756<br/>YFR010W(UBP6) 0.116 1939 4289<br/>YLL021W(SPA2) -0.092 2523 3705<br/>YBR278W(DPB3) -0.011 5671 557<br/>YJR139C(HOM6) 0.043 4149 2079<br/>YLR337C(VRP1) 0.176 1058 5170<br/>YBR260C(RGD1) -0.137 1564 4664<br/>YMR032W(HOF1) -0.100 2306 3922<br/>YLR357W(RSC2) -0.144 1453 4775<br/>YOR326W(MYO2) 0.061 3439 2789<br/>YDL002C(NHP10) -0.021 5131 1097<br/><br/><br/>ES Random Genesets = [0.38110172579282298] ES Random KOs = [0.38110172579282298] ES Random Genesets = [0.58294068724662318] ES Random KOs = [0.58294068724662318]<br/><br/>p Random Genesets = 0.3 p Random KOs = 0.14 p Random Genesets = 0.28 p Random KOs = 0.16 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YCR009C (RVS161)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YKL079W(SMY1) 0.025 4099 2131 <span style='background:yellow;'>YDL040C(NAT1) 0.055 4102 2128</span><br/>YPL106C(SSE1) 0.090 947 5283 <span style='background:yellow;'>YHR013C(ARD1) 0.039 3197 3033</span><br/>YHR178W(STB5) 0.017 4780 1450 YHR023W(MYO1) 0.021 1877 4353<br/>YBR200W(BEM1) 0.030 3740 2490<br/>YNL084C(END3) 0.076 1345 4885<br/>YBR245C(ISW1) -0.019 4605 1625<br/>YOR181W(LAS17) 0.096 823 5407<br/>YMR287C(DSS1) -0.011 5286 944<br/>YGR188C(BUB1) -0.023 4268 1962<br/>YOR035C(SHE4) 0.104 668 5562<br/><u>YCR009C</u>(<u>RVS161</u>) -0.216 123 6107<br/>YDR388W(RVS167) 0.001 6183 47<br/>YFR010W(UBP6) 0.090 947 5283<br/>YLL021W(SPA2) -0.057 2088 4142<br/>YBR278W(DPB3) -0.039 3101 3129<br/>YJR139C(HOM6) 0.086 1045 5185<br/>YLR337C(VRP1) 0.114 544 5686<br/>YBR260C(RGD1) 0.019 4605 1625<br/>YMR032W(HOF1) -0.026 4028 2202<br/>YLR357W(RSC2) -0.056 2126 4104<br/>YOR326W(MYO2) -0.020 4522 1708<br/>YDL002C(NHP10) -0.048 2566 3664<br/><br/><br/>ES Random Genesets = [0.32631853364381125] ES Random KOs = [0.32631853364381125] ES Random Genesets = [-0.34157303370786518] ES Random KOs = [-0.34157303370786518]<br/><br/>p Random Genesets = 0.5 p Random KOs = 0.37 p Random Genesets = 0.69 p Random KOs = 0.7 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YHR013C (ARD1)-----<br/><br/>The length of the pathway opposite the knockout: 22<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL040C(NAT1) -0.121 315 5913 YKL079W(SMY1) 0.017 1830 4398<br/><u>YHR013C</u>(<u>ARD1</u>) -0.864 3 6225 <span style='background:yellow;'>YPL106C(SSE1) -0.054 4533 1695</span><br/>YHR023W(MYO1) 0.010 5167 1061 YHR178W(STB5) 0.012 1359 4869<br/> YBR200W(BEM1) -0.009 1059 5169<br/> YNL084C(END3) 0.002 312 5916<br/> YBR245C(ISW1) -0.002 312 5916<br/> <span style='background:yellow;'>YOR181W(LAS17) 0.053 4476 1752</span><br/> <span style='background:yellow;'>YMR287C(DSS1) -0.053 4476 1752</span><br/> YGR188C(BUB1) -0.004 514 5714<br/> YOR035C(SHE4) 0.005 616 5612<br/> <span style='background:yellow;'>YCR009C(RVS161) 0.058 4692 1536</span><br/> <span style='background:yellow;'>YDR388W(RVS167) 0.040 3727 2501</span><br/> <span style='background:yellow;'>YFR010W(UBP6) 0.073 5227 1001</span><br/> YLL021W(SPA2) 0.013 1456 4772<br/> YBR278W(DPB3) 0.015 1649 4579<br/> <span style='background:yellow;'>YJR139C(HOM6) 0.036 3444 2784</span><br/> YLR337C(VRP1) 0.020 2128 4100<br/> YBR260C(RGD1) 0.002 312 5916<br/> <span style='background:yellow;'>YMR032W(HOF1) -0.100 5712 516</span><br/> YLR357W(RSC2) 0.022 2321 3907<br/> <span style='background:yellow;'>YOR326W(MYO2) 0.035 3378 2850</span><br/> YDL002C(NHP10) 0.029 2914 3314<br/><br/><br/>ES Random Genesets = [0.78852249446178646] ES Random KOs = [0.78852249446178646] ES Random Genesets = [0.24508377306070489] ES Random KOs = [0.24508377306070489]<br/><br/>p Random Genesets = 0.0 p Random KOs = 0.0 p Random Genesets = 0.88 p Random KOs = 0.89 ES Pruned Random Genesets =[0.54238921001926776]p Pruned Random Genesets = 0.08 ES Pruned Random KOs =[0.54238921001926776] p Pruned Random KOs = 0.07<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 2<br/>-----Knockout Gene:YOR038C (HIR2)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YJL115W(ASF1) 0.059 1589 4639 YNL107W(YAF9) -0.009 1029 5199<br/>YOR213C(SAS5) 0.002 6052 176 <span style='background:yellow;'>YLR399C(BDF1) -0.066 4915 1313</span><br/><u>YOR038C</u>(<u>HIR2</u>) -0.670 4 6224 YDR359C(EAF1) 0.010 1144 5084<br/>YDL070W(BDF2) -0.009 5307 921<br/>YBL008W(HIR1) 0.033 3152 3076<br/><br/><br/>ES Random Genesets = [0.361991058921103] ES Random KOs = [0.361991058921103] ES Random Genesets = [0.48260341413060659] ES Random KOs = [0.48260341413060659]<br/><br/>p Random Genesets = 0.61 p Random KOs = 0.57 p Random Genesets = 0.49 p Random KOs = 0.34 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 3<br/>-----Knockout Gene:YEL053C (MAK10)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YPR051W(MAK3) 0.025 2959 3269 YLR200W(YKE2) -0.006 935 5293<br/><u>YEL053C</u>(<u>MAK10</u>) -0.484 5 6223 YML094W(GIM5) 0.021 2936 3292<br/> <span style='background:yellow;'>YGR078C(PAC10) 0.038 4513 1715</span><br/><br/><br/>ES Random Genesets = [0.54190751445086704] ES Random KOs = [0.54190751445086704] ES Random Genesets = [0.35989744971000215] ES Random KOs = [0.35989744971000215]<br/><br/>p Random Genesets = 0.46 p Random KOs = 0.18 p Random Genesets = 0.67 p Random KOs = 0.74 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 4<br/>-----Knockout Gene:YHR013C (ARD1)-----<br/><br/>The length of the pathway opposite the knockout: 50<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL040C(NAT1) -0.121 315 5913 YNL097C(PHO23) -0.001 181 6047<br/><u>YHR013C</u>(<u>ARD1</u>) -0.864 3 6225 YDR378C(LSM6) -0.022 2321 3907<br/> <span style='background:yellow;'>YCL008C(STP22) 0.065 4973 1255</span><br/> YBR245C(ISW1) -0.002 312 5916<br/> YNL070W(TOM7) -0.001 181 6047<br/> YPL084W(BRO1) 0.004 514 5714<br/> YOR308C(SNU66) 0.001 181 6047<br/> <span style='background:yellow;'>YOL004W(SIN3) 0.083 5441 787</span><br/> <span style='background:yellow;'>YER122C(GLO3) -0.035 3378 2850</span><br/> YJL124C(LSM1) 0.023 2420 3808<br/> <span style='background:yellow;'>YNL153C(GIM3) 0.041 3796 2432</span><br/> YDL013W(SLX5) 0.030 2994 3234<br/> YHR178W(STB5) 0.012 1359 4869<br/> <span style='background:yellow;'>YPL178W(CBC2) 0.037 3528 2700</span><br/> YNL297C(MON2) 0.005 616 5612<br/> YPR101W(SNT309) -0.004 514 5714<br/> <span style='background:yellow;'>YOR026W(BUB3) -0.034 3316 2912</span><br/> <span style='background:yellow;'>YNR006W(VPS27) 0.075 5280 948</span><br/> <span style='background:yellow;'>YOR147W(MDM32) 0.052 4421 1807</span><br/> YMR263W(SAP30) 0.019 2027 4201<br/> <span style='background:yellow;'>YNL209W(SSB2) 0.036 3444 2784</span><br/> <span style='background:yellow;'>YHR194W(MDM31) -0.037 3528 2700</span><br/> <span style='background:yellow;'>YLR110C(CCW12) -0.077 5322 906</span><br/> <span style='background:yellow;'>YNL302C(RPS19B) -0.053 4476 1752</span><br/> YAL024C(LTE1) -0.008 945 5283<br/> YGL173C(KEM1) -0.009 1059 5169<br/> <span style='background:yellow;'>YHR167W(THP2) 0.033 3237 2991</span><br/> YDR359C(EAF1) 0.002 312 5916<br/> <span style='background:yellow;'>YCR009C(RVS161) 0.058 4692 1536</span><br/> <span style='background:yellow;'>YGR208W(SER2) 0.054 4533 1695</span><br/> YNL107W(YAF9) 0.026 2690 3538<br/> <span style='background:yellow;'>YPL213W(LEA1) 0.065 4973 1255</span><br/> YNL330C(RPD3) 0.009 1059 5169<br/> YER111C(SWI4) -0.030 2994 3234<br/> <span style='background:yellow;'>YGR180C(RNR4) 0.076 5296 932</span><br/> YLR357W(RSC2) 0.022 2321 3907<br/> YDL002C(NHP10) 0.029 2914 3314<br/> YFL023W(BUD27) 0.006 723 5505<br/> <span style='background:yellow;'>YPL106C(SSE1) -0.054 4533 1695</span><br/> YNL147W(LSM7) -0.003 418 5810<br/> YLR067C(PET309) 0.016 1735 4493<br/> <span style='background:yellow;'>YJL095W(BCK1) -0.080 5381 847</span><br/> YLR182W(SWI6) -0.015 1649 4579<br/> YGR188C(BUB1) -0.004 514 5714<br/> YDR432W(NPL3) -0.019 2027 4201<br/> YMR165C(PAH1) 0.002 312 5916<br/> <span style='background:yellow;'>YIR009W(MSL1) 0.057 4651 1577</span><br/> YEL050C(RML2) 0.012 1359 4869<br/> YLR200W(YKE2) -0.030 2994 3234<br/> <span style='background:yellow;'>YER116C(SLX8) -0.059 4741 1487</span><br/><br/><br/>ES Random Genesets = [0.95006422607578678] ES Random KOs = [0.95006422607578678] ES Random Genesets = [0.25859480990236894] ES Random KOs = [0.25859480990236894]<br/><br/>p Random Genesets = 0.0 p Random KOs = 0.0 p Random Genesets = 0.74 p Random KOs = 0.53 ES Pruned Random Genesets =[0.51974951830443161]p Pruned Random Genesets = 0.0 ES Pruned Random KOs =[0.51974951830443161] p Pruned Random KOs = 0.0<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 5<br/>-----Knockout Gene:YMR263W (SAP30)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6260<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> <u>YMR263W</u>(<u>SAP30</u>) -0.992 2 6258 YJL115W(ASF1) 0.033 1999 4261<br/>YAL013W(DEP1) -0.133 1000 5260 YOR213C(SAS5) 0.016 1007 5253<br/> YJR140C(HIR3) 0.050 2866 3394<br/><br/><br/>ES Random Genesets = [0.84233226837060704] ES Random KOs = [0.84233226837060704] ES Random Genesets = [-0.54217252396166138] ES Random KOs = [-0.54217252396166138]<br/><br/>p Random Genesets = 0.01 p Random KOs = 0.0 p Random Genesets = 0.92 p Random KOs = 0.81 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 6<br/>-----Knockout Gene:YOR026W (BUB3)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6113<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YJL013C(MAD3) 0.119 1015 5098 YHR191C(CTF8) -0.016 1072 5041<br/>YGL086W(MAD1) -0.018 4983 1130 <span style='background:yellow;'>YCL016C(DCC1) 0.097 4656 1457</span><br/><u>YOR026W</u>(<u>BUB3</u>) -0.602 11 6102 YMR078C(CTF18) -0.033 2053 4060<br/>YGR188C(BUB1) -0.026 4507 1606<br/>YJL030W(MAD2) 0.042 3615 2498<br/><br/><br/>ES Random Genesets = [0.32352162734451662] ES Random KOs = [0.32352162734451662] ES Random Genesets = [0.36003615916854265] ES Random KOs = [0.36003615916854265]<br/><br/>p Random Genesets = 0.8 p Random KOs = 0.55 p Random Genesets = 0.78 p Random KOs = 0.48 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YJL030W (MAD2)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6263<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YJL013C(MAD3) -0.073 829 5434 YHR191C(CTF8) 0.009 1066 5197<br/>YGL086W(MAD1) 0.052 1637 4626 YCL016C(DCC1) 0.012 1385 4878<br/>YOR026W(BUB3) -0.009 5326 937 YMR078C(CTF18) -0.027 2888 3375<br/>YGR188C(BUB1) -0.014 4772 1491<br/><u>YJL030W</u>(<u>MAD2</u>) -0.247 22 6241<br/><br/><br/>ES Random Genesets = [0.53966401962692223] ES Random KOs = [0.53966401962692223] ES Random Genesets = [-0.53887913140667409] ES Random KOs = [-0.53887913140667409]<br/><br/>p Random Genesets = 0.29 p Random KOs = 0.07 p Random Genesets = 0.92 p Random KOs = 0.66 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 7<br/>-----Knockout Gene:YMR263W (SAP30)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6260<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YGL043W(DST1) -0.174 537 5723 YLR418C(CDC73) -0.003 203 6057<br/>YPL181W(CTI6) 0.063 2896 3364 YOR123C(LEO1) -0.016 1007 5253<br/>YDR392W(SPT3) 0.041 3873 2387 <span style='background:yellow;'>YBR279W(PAF1) -0.107 4797 1463</span><br/><u>YMR263W</u>(<u>SAP30</u>) -0.992 2 6258 YGL244W(RTF1) -0.039 2344 3916<br/>YAL013W(DEP1) -0.133 1000 5260<br/>YLR055C(SPT8) 0.148 798 5462<br/><br/><br/>ES Random Genesets = [0.58048297171260144] ES Random KOs = [0.58048297171260144] ES Random Genesets = [0.34071615459570764] ES Random KOs = [0.34071615459570764]<br/><br/>p Random Genesets = 0.1 p Random KOs = 0.06 p Random Genesets = 0.77 p Random KOs = 0.38 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 8<br/>-----Knockout Gene:YOR038C (HIR2)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YOR151C(RPB2) 0.005 5706 522 <span style='background:yellow;'>YDR138W(HPR1) -0.057 4595 1633</span><br/><u>YOR038C</u>(<u>HIR2</u>) -0.670 4 6224 <span style='background:yellow;'>YGL043W(DST1) 0.045 3959 2269</span><br/>YLR418C(CDC73) 0.036 2927 3301 <span style='background:yellow;'>YPL042C(SSN3) -0.088 5500 728</span><br/>YGR063C(SPT4) -0.084 830 5398 YKL139W(CTK1) -0.032 3074 3154<br/>YML010W(SPT5) -0.006 5608 620 YAL021C(CCR4) 0.002 277 5951<br/>YBL008W(HIR1) 0.033 3152 3076<br/>YBR279W(PAF1) -0.018 4417 1811<br/>YGR104C(SRB5) 0.048 2141 4087<br/><br/><br/>ES Random Genesets = [0.33710608735697406] ES Random KOs = [0.33710608735697406] ES Random Genesets = [0.47766242545780679] ES Random KOs = [0.47766242545780679]<br/><br/>p Random Genesets = 0.75 p Random KOs = 0.28 p Random Genesets = 0.26 p Random KOs = 0.22 ES Pruned Random Genesets =[0.63567758509955041]p Pruned Random Genesets = 0.21 ES Pruned Random KOs =[0.63567758509955041] p Pruned Random KOs = 0.06<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 9<br/>-----Knockout Gene:YOR035C (SHE4)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YKL079W(SMY1) 0.136 1581 4647 YDL225W(SHS1) 0.022 1200 5028<br/><u>YOR035C</u>(<u>SHE4</u>) -0.921 9 6219 <span style='background:yellow;'>YBR023C(CHS3) 0.198 5409 819</span><br/>YOR326W(MYO2) 0.061 3439 2789 YNL233W(BNI4) 0.007 394 5834<br/> YBL061C(SKT5) 0.057 2679 3549<br/><br/><br/>ES Random Genesets = [0.45375722543352603] ES Random KOs = [0.45375722543352603] ES Random Genesets = [0.42716267479250569] ES Random KOs = [0.42716267479250569]<br/><br/>p Random Genesets = 0.47 p Random KOs = 0.34 p Random Genesets = 0.51 p Random KOs = 0.38 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 10<br/>-----Knockout Gene:YMR294W (JNM1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YHR129C(ARP1) 0.018 3861 2369 YCR065W(HCM1) -0.022 2921 3309<br/>YCL029C(BIK1) 0.070 576 5654 YMR198W(CIK1) -0.017 2367 3863<br/><u>YMR294W</u>(<u>JNM1</u>) -0.302 25 6205 <span style='background:yellow;'>YPR141C(KAR3) -0.028 3545 2685</span><br/>YLR045C(STU2) -0.003 5867 363<br/>YIL090W(ICE2) -0.042 1645 4585<br/>YFL037W(TUB2) -0.077 457 5773<br/><br/><br/>ES Random Genesets = [0.58769226053845758] ES Random KOs = [0.58769226053845758] ES Random Genesets = [-0.43097913322632425] ES Random KOs = [-0.43097913322632425]<br/><br/>p Random Genesets = 0.28 p Random KOs = 0.4 p Random Genesets = 0.81 p Random KOs = 0.91 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 11<br/>-----Knockout Gene:YHR013C (ARD1)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL040C(NAT1) -0.121 315 5913 YLR417W(VPS36) -0.012 1359 4869<br/><u>YHR013C</u>(<u>ARD1</u>) -0.864 3 6225 <span style='background:yellow;'>YJR102C(VPS25) 0.041 3796 2432</span><br/> YPL002C(SNF8) -0.008 945 5283<br/> <span style='background:yellow;'>YMR077C(VPS20) 0.033 3237 2991</span><br/><br/><br/>ES Random Genesets = [0.95006422607578678] ES Random KOs = [0.95006422607578678] ES Random Genesets = [-0.39049454078355811] ES Random KOs = [-0.39049454078355811]<br/><br/>p Random Genesets = 0.0 p Random KOs = 0.0 p Random Genesets = 0.83 p Random KOs = 0.73 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 12<br/>-----Knockout Gene:YLR234W (TOP3)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YPL024W(RMI1) -0.050 994 5234 YBR098W(MMS4) -0.010 1696 4532<br/>YMR167W(MLH1) -0.017 3651 2577 <span style='background:yellow;'>YDR052C(DBF4) -0.039 4778 1450</span><br/><u>YLR234W</u>(<u>TOP3</u>) -0.004 5639 589 YDL017W(CDC7) -0.004 746 5482<br/>YMR190C(SGS1) 0.003 5820 408 YPL153C(RAD53) 0.005 936 5292<br/> YDR386W(MUS81) -0.007 1231 4997<br/><br/><br/>ES Random Genesets = [0.46201792873641323] ES Random KOs = [0.46201792873641323] ES Random Genesets = [0.27618228628819463] ES Random KOs = [0.27618228628819463]<br/><br/>p Random Genesets = 0.55 p Random KOs = 0.27 p Random Genesets = 0.82 p Random KOs = 0.65 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YMR190C (SGS1)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6227<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YPL024W(RMI1) 0.064 2000 4227 YBR098W(MMS4) -0.032 2541 3686<br/>YMR167W(MLH1) 0.003 6022 205 <span style='background:yellow;'>YDR052C(DBF4) -0.066 4347 1880</span><br/>YLR234W(TOP3) 0.026 4167 2060 YDL017W(CDC7) 0.042 3157 3070<br/><u>YMR190C</u>(<u>SGS1</u>) -0.357 28 6199 YPL153C(RAD53) -0.021 1724 4503<br/> YDR386W(MUS81) 0.005 444 5783<br/><br/><br/>ES Random Genesets = [0.32356017512868412] ES Random KOs = [0.32356017512868412] ES Random Genesets = [-0.30191103259996788] ES Random KOs = [-0.30191103259996788]<br/><br/>p Random Genesets = 0.77 p Random KOs = 0.64 p Random Genesets = 0.79 p Random KOs = 0.68 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 13<br/>-----Knockout Gene:YMR055C (BUB2)-----<br/><br/>The length of the pathway opposite the knockout: 8<br/><br/>The length of the list of log10 values: 6261<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YJR053W(BFA1) -0.018 4606 1655 YLR212C(TUB4) -0.004 448 5813<br/><u>YMR055C</u>(<u>BUB2</u>) -0.622 21 6240 <span style='background:yellow;'>YEL061C(CIN8) -0.077 5355 906</span><br/> <span style='background:yellow;'>YLR200W(YKE2) 0.038 3360 2901</span><br/> YAL047C(SPC72) 0.018 1743 4518<br/> YML094W(GIM5) 0.031 2826 3435<br/> <span style='background:yellow;'>YNL153C(GIM3) -0.080 5446 815</span><br/> YGR078C(PAC10) -0.031 2826 3435<br/> YEL003W(GIM4) -0.018 1743 4518<br/><br/><br/>ES Random Genesets = [-0.72160996645903208] ES Random KOs = [-0.72160996645903208] ES Random Genesets = [0.31013108174822235] ES Random KOs = [0.31013108174822235]<br/><br/>p Random Genesets = 0.77 p Random KOs = 0.92 p Random Genesets = 0.77 p Random KOs = 0.64 ES Pruned Random Genesets =[0.61802330222091373]p Pruned Random Genesets = 0.14 ES Pruned Random KOs =[0.61802330222091373] p Pruned Random KOs = 0.16<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 14<br/>-----Knockout Gene:YLR342W (FKS1)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDR309C(GIC2) 0.175 491 5737 YNL271C(BNI1) -0.029 1746 4482<br/>YGR229C(SMI1) -0.004 6000 228 YER155C(BEM2) -0.046 2735 3493<br/>YKL079W(SMY1) 0.080 2074 4154 YLL021W(SPA2) -0.030 1807 4421<br/>YBR200W(BEM1) -0.044 3654 2574 YOR326W(MYO2) 0.037 2210 4018<br/>YDL225W(SHS1) -0.019 5114 1114<br/>YNL233W(BNI4) -0.072 2361 3867<br/>YJL095W(BCK1) -0.017 5220 1008<br/>YHR030C(SLT2) 0.484 26 6202<br/><u>YLR342W</u>(<u>FKS1</u>) -1.098 2 6226<br/>YER111C(SWI4) -0.108 1366 4862<br/>YJL187C(SWE1) 0.009 5692 536<br/>YNL289W(PCL1) 0.001 6196 32<br/>YPR165W(RHO1) 0.130 952 5276<br/>YNL298W(CLA4) 0.086 1904 4324<br/>YLR229C(CDC42) -0.113 1258 4970<br/><br/><br/>ES Random Genesets = [0.49664860249886239] ES Random KOs = [0.49664860249886239] ES Random Genesets = [-0.56085420680796405] ES Random KOs = [-0.56085420680796405]<br/><br/>p Random Genesets = 0.03 p Random KOs = 0.07 p Random Genesets = 0.95 p Random KOs = 0.94 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YER111C (SWI4)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6226<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDR309C(GIC2) 0.008 5867 359 YNL271C(BNI1) 0.058 2509 3717<br/>YGR229C(SMI1) 0.039 4490 1736 YER155C(BEM2) -0.031 1479 4747<br/>YKL079W(SMY1) -0.047 4169 2057 YLL021W(SPA2) -0.040 1817 4409<br/>YBR200W(BEM1) 0.043 4321 1905 YOR326W(MYO2) -0.071 2956 3270<br/>YDL225W(SHS1) -0.092 2644 3582<br/>YNL233W(BNI4) 0.027 4959 1267<br/>YJL095W(BCK1) -0.038 4523 1703<br/>YHR030C(SLT2) 0.117 2057 4169<br/>YLR342W(FKS1) 0.061 3648 2578<br/><u>YER111C</u>(<u>SWI4</u>) -0.819 21 6205<br/>YJL187C(SWE1) -0.069 3384 2842<br/>YNL289W(PCL1) 0.011 5711 515<br/>YPR165W(RHO1) -0.007 5915 311<br/>YNL298W(CLA4) 0.053 3964 2262<br/>YLR229C(CDC42) -0.108 2257 3969<br/><br/><br/>ES Random Genesets = [-0.32685512367491165] ES Random KOs = [-0.32685512367491165] ES Random Genesets = [-0.52521683263732732] ES Random KOs = [-0.52521683263732732]<br/><br/>p Random Genesets = 0.98 p Random KOs = 0.99 p Random Genesets = 0.93 p Random KOs = 0.93 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YPR165W (RHO1)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDR309C(GIC2) -0.002 6059 169 <span style='background:yellow;'>YNL271C(BNI1) 0.060 5035 1193</span><br/>YGR229C(SMI1) -0.002 6059 169 <span style='background:yellow;'>YER155C(BEM2) -0.055 4836 1392</span><br/>YKL079W(SMY1) -0.089 576 5652 YLL021W(SPA2) 0.010 1287 4941<br/>YBR200W(BEM1) -0.010 5056 1172 YOR326W(MYO2) 0.003 417 5811<br/>YDL225W(SHS1) -0.028 3159 3069<br/>YNL233W(BNI4) -0.042 2075 4153<br/>YJL095W(BCK1) -0.017 4282 1946<br/>YHR030C(SLT2) 0.009 5173 1055<br/>YLR342W(FKS1) 0.023 3629 2599<br/>YER111C(SWI4) -0.051 1580 4648<br/>YJL187C(SWE1) -0.053 1494 4734<br/>YNL289W(PCL1) 0.051 1580 4648<br/><u>YPR165W</u>(<u>RHO1</u>) -0.446 9 6219<br/>YNL298W(CLA4) 0.064 1073 5155<br/>YLR229C(CDC42) -0.045 1890 4338<br/><br/><br/>ES Random Genesets = [0.43056485530284883] ES Random KOs = [0.43056485530284883] ES Random Genesets = [0.62927943336787384] ES Random KOs = [0.62927943336787384]<br/><br/>p Random Genesets = 0.23 p Random KOs = 0.2 p Random Genesets = 0.16 p Random KOs = 0.05 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YNL298W (CLA4)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDR309C(GIC2) 0.185 89 6139 <span style='background:yellow;'>YNL271C(BNI1) 0.078 4792 1436</span><br/>YGR229C(SMI1) -0.114 588 5640 <span style='background:yellow;'>YER155C(BEM2) -0.064 4234 1994</span><br/>YKL079W(SMY1) -0.089 1145 5083 YLL021W(SPA2) -0.013 1027 5201<br/>YBR200W(BEM1) -0.050 2768 3460 <span style='background:yellow;'>YOR326W(MYO2) -0.102 5440 788</span><br/>YDL225W(SHS1) -0.045 3056 3172<br/>YNL233W(BNI4) -0.049 2836 3392<br/>YJL095W(BCK1) 0.081 1379 4849<br/>YHR030C(SLT2) 0.154 181 6047<br/>YLR342W(FKS1) 0.088 1178 5050<br/>YER111C(SWI4) -0.097 936 5292<br/>YJL187C(SWE1) 0.044 3119 3109<br/>YNL289W(PCL1) 0.167 140 6088<br/>YPR165W(RHO1) -0.057 2376 3852<br/><u>YNL298W</u>(<u>CLA4</u>) -0.883 4 6224<br/>YLR229C(CDC42) -0.004 5981 247<br/><br/><br/>ES Random Genesets = [0.50384158845422511] ES Random KOs = [0.50384158845422511] ES Random Genesets = [0.61354501117022986] ES Random KOs = [0.61354501117022986]<br/><br/>p Random Genesets = 0.05 p Random KOs = 0.07 p Random Genesets = 0.12 p Random KOs = 0.09 ES Pruned Random Genesets =[0.67983301220295433]p Pruned Random Genesets = 0.12 ES Pruned Random KOs =[0.67983301220295433] p Pruned Random KOs = 0.04<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YLR229C (CDC42)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDR309C(GIC2) 0.323 146 6082 YNL271C(BNI1) 0.031 1418 4810<br/>YGR229C(SMI1) -0.172 1062 5166 <span style='background:yellow;'>YER155C(BEM2) -0.156 4960 1268</span><br/>YKL079W(SMY1) 0.057 3831 2397 YLL021W(SPA2) -0.034 1554 4674<br/>YBR200W(BEM1) -0.076 3188 3040 YOR326W(MYO2) 0.011 535 5693<br/>YDL225W(SHS1) -0.054 3929 2299<br/>YNL233W(BNI4) -0.139 1607 4621<br/>YJL095W(BCK1) 0.051 4055 2173<br/>YHR030C(SLT2) 0.554 24 6204<br/>YLR342W(FKS1) 0.435 56 6172<br/>YER111C(SWI4) -0.263 334 5894<br/>YJL187C(SWE1) 0.127 1859 4369<br/>YNL289W(PCL1) 0.058 3783 2445<br/>YPR165W(RHO1) 0.073 3277 2951<br/>YNL298W(CLA4) 0.070 3377 2851<br/><u>YLR229C</u>(<u>CDC42</u>) -0.530 27 6201<br/><br/><br/>ES Random Genesets = [0.38338620670194234] ES Random KOs = [0.38338620670194234] ES Random Genesets = [0.38220704827135366] ES Random KOs = [0.38220704827135366]<br/><br/>p Random Genesets = 0.43 p Random KOs = 0.35 p Random Genesets = 0.64 p Random KOs = 0.49 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YNL271C (BNI1)-----<br/><br/>The length of the pathway opposite the knockout: 15<br/><br/>The length of the list of log10 values: 6279<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> <u>YNL271C</u>(<u>BNI1</u>) -0.256 55 6224 YDR309C(GIC2) 0.020 2272 4007<br/>YER155C(BEM2) -0.085 684 5595 <span style='background:yellow;'>YGR229C(SMI1) -0.071 5310 969</span><br/>YLL021W(SPA2) -0.005 5741 538 <span style='background:yellow;'>YKL079W(SMY1) 0.118 5951 328</span><br/>YOR326W(MYO2) -0.024 3699 2580 YBR200W(BEM1) 0.002 298 5981<br/> YDL225W(SHS1) -0.010 1224 5055<br/> YNL233W(BNI4) -0.011 1327 4952<br/> YJL095W(BCK1) -0.022 2485 3794<br/> <span style='background:yellow;'>YHR030C(SLT2) 0.293 6238 41</span><br/> YLR342W(FKS1) 0.014 1655 4624<br/> <span style='background:yellow;'>YER111C(SWI4) 0.036 3701 2578</span><br/> YJL187C(SWE1) -0.023 2578 3701<br/> <span style='background:yellow;'>YNL289W(PCL1) 0.064 5109 1170</span><br/> YPR165W(RHO1) 0.027 2984 3295<br/> YNL298W(CLA4) 0.000 57 6222<br/> YLR229C(CDC42) 0.017 1983 4296<br/><br/><br/>ES Random Genesets = [0.51790100904648562] ES Random KOs = [0.51790100904648562] ES Random Genesets = [0.33733734713032892] ES Random KOs = [0.33733734713032892]<br/><br/>p Random Genesets = 0.04 p Random KOs = 0.02 p Random Genesets = 0.55 p Random KOs = 0.5 ES Pruned Random Genesets =[0.67299030230544821]p Pruned Random Genesets = 0.04 ES Pruned Random KOs =[0.67299030230544821] p Pruned Random KOs = 0.06<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 15<br/>-----Knockout Gene:YOR035C (SHE4)-----<br/><br/>The length of the pathway opposite the knockout: 6<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YFL039C(ACT1) 0.257 463 5765 <span style='background:yellow;'>YDL029W(ARP2) 0.221 5558 670</span><br/>YOR329C(SCD5) 0.198 823 5405 <span style='background:yellow;'>YBR234C(ARC40) 0.273 5835 393</span><br/>YJL099W(CHS6) 0.230 604 5624 <span style='background:yellow;'>YCR088W(ABP1) 0.117 4339 1889</span><br/>YLR268W(SEC22) 0.010 5734 494 YDR388W(RVS167) 0.060 2787 3441<br/>YNL084C(END3) 0.191 895 5333 <span style='background:yellow;'>YCR009C(RVS161) 0.124 4467 1761</span><br/>YDR129C(SAC6) 0.129 1691 4537 YIR006C(PAN1) -0.039 1951 4277<br/>YJL095W(BCK1) -0.040 4275 1953<br/>YOR181W(LAS17) -0.012 5612 616<br/>YLR330W(CHS5) 0.152 1334 4894<br/>YMR109W(MYO5) 0.038 4368 1860<br/>YHR030C(SLT2) 0.647 25 6203<br/><u>YOR035C</u>(<u>SHE4</u>) -0.921 9 6219<br/>YNL298W(CLA4) -0.002 6143 85<br/>YNL243W(SLA2) 0.133 1626 4602<br/>YBL007C(SLA1) -0.004 6037 191<br/><br/><br/>ES Random Genesets = [0.61624243367824549] ES Random KOs = [0.61624243367824549] ES Random Genesets = [0.5066935601286211] ES Random KOs = [0.5066935601286211]<br/><br/>p Random Genesets = 0.0 p Random KOs = 0.0 p Random Genesets = 0.2 p Random KOs = 0.38 ES Pruned Random Genesets =[0.69669235709698141]p Pruned Random Genesets = 0.03 ES Pruned Random KOs =[0.69669235709698141] p Pruned Random KOs = 0.04<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YNL298W (CLA4)-----<br/><br/>The length of the pathway opposite the knockout: 6<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YFL039C(ACT1) 0.101 839 5389 <span style='background:yellow;'>YDL029W(ARP2) 0.107 5533 695</span><br/>YOR329C(SCD5) 0.077 1489 4739 <span style='background:yellow;'>YBR234C(ARC40) 0.049 3458 2770</span><br/>YJL099W(CHS6) -0.099 891 5337 <span style='background:yellow;'>YCR088W(ABP1) 0.148 6013 215</span><br/>YLR268W(SEC22) 0.004 5981 247 <span style='background:yellow;'>YDR388W(RVS167) 0.138 5941 287</span><br/>YNL084C(END3) -0.034 3793 2435 <span style='background:yellow;'>YCR009C(RVS161) -0.067 4386 1842</span><br/>YDR129C(SAC6) 0.025 4384 1844 <span style='background:yellow;'>YIR006C(PAN1) 0.109 5567 661</span><br/>YJL095W(BCK1) 0.081 1379 4849<br/>YOR181W(LAS17) 0.144 245 5983<br/>YLR330W(CHS5) -0.062 2133 4095<br/>YMR109W(MYO5) 0.055 2491 3737<br/>YHR030C(SLT2) 0.154 181 6047<br/>YOR035C(SHE4) -0.025 4384 1844<br/><u>YNL298W</u>(<u>CLA4</u>) -0.883 4 6224<br/>YNL243W(SLA2) 0.095 988 5240<br/>YBL007C(SLA1) 0.138 295 5933<br/><br/><br/>ES Random Genesets = [0.51480744831996739] ES Random KOs = [0.51480744831996739] ES Random Genesets = [0.6345396290768478] ES Random KOs = [0.6345396290768478]<br/><br/>p Random Genesets = 0.09 p Random KOs = 0.06 p Random Genesets = 0.05 p Random KOs = 0.08 ES Pruned Random Genesets =[0.6345396290768478]p Pruned Random Genesets = 0.06 ES Pruned Random KOs =[0.6345396290768478] p Pruned Random KOs = 0.04<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YCR009C (RVS161)-----<br/><br/>The length of the pathway opposite the knockout: 15<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL029W(ARP2) 0.064 1785 4445 <span style='background:yellow;'>YFL039C(ACT1) 0.320 6137 93</span><br/>YBR234C(ARC40) 0.053 2288 3942 YOR329C(SCD5) 0.008 764 5466<br/>YCR088W(ABP1) 0.010 5369 861 <span style='background:yellow;'>YJL099W(CHS6) 0.049 3762 2468</span><br/>YDR388W(RVS167) 0.001 6183 47 YLR268W(SEC22) -0.031 2668 3562<br/><u>YCR009C</u>(<u>RVS161</u>) -0.216 123 6107 <span style='background:yellow;'>YNL084C(END3) 0.076 4915 1315</span><br/>YIR006C(PAN1) -0.006 5736 494 <span style='background:yellow;'>YDR129C(SAC6) 0.084 5159 1071</span><br/> YJL095W(BCK1) -0.018 1623 4607<br/> <span style='background:yellow;'>YOR181W(LAS17) 0.096 5424 806</span><br/> YLR330W(CHS5) -0.005 492 5738<br/> <span style='background:yellow;'>YMR109W(MYO5) 0.053 3993 2237</span><br/> <span style='background:yellow;'>YHR030C(SLT2) 0.077 4955 1275</span><br/> <span style='background:yellow;'>YOR035C(SHE4) 0.104 5578 652</span><br/> YNL298W(CLA4) 0.003 322 5908<br/> YNL243W(SLA2) 0.003 322 5908<br/> YBL007C(SLA1) -0.020 1787 4443<br/><br/><br/>ES Random Genesets = [0.47582317170977456] ES Random KOs = [0.47582317170977456] ES Random Genesets = [0.46047630072229961] ES Random KOs = [0.46047630072229961]<br/><br/>p Random Genesets = 0.1 p Random KOs = 0.02 p Random Genesets = 0.1 p Random KOs = 0.04 ES Pruned Random Genesets =[0.60385232744783313]p Pruned Random Genesets = 0.05 ES Pruned Random KOs =[0.60385232744783313] p Pruned Random KOs = 0.05<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 16<br/>-----Knockout Gene:YLR234W (TOP3)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YPL024W(RMI1) -0.050 994 5234 YOL090W(MSH2) -0.014 2296 3932<br/><u>YLR234W</u>(<u>TOP3</u>) -0.004 5639 589 <span style='background:yellow;'>YBR228W(SLX1) -0.029 4065 2163</span><br/>YMR190C(SGS1) 0.003 5820 408 YLR135W(SLX4) 0.017 2709 3519<br/> YPL022W(RAD1) 0.007 1231 4997<br/><br/><br/>ES Random Genesets = [0.74648959559492423] ES Random KOs = [0.74648959559492423] ES Random Genesets = [-0.34730250481695568] ES Random KOs = [-0.34730250481695568]<br/><br/>p Random Genesets = 0.09 p Random KOs = 0.04 p Random Genesets = 0.87 p Random KOs = 0.66 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YMR190C (SGS1)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6227<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YPL024W(RMI1) 0.064 2000 4227 YOL090W(MSH2) -0.022 1818 4409<br/>YLR234W(TOP3) 0.026 4167 2060 <span style='background:yellow;'>YBR228W(SLX1) 0.085 4970 1257</span><br/><u>YMR190C</u>(<u>SGS1</u>) -0.357 28 6199 <span style='background:yellow;'>YLR135W(SLX4) 0.080 4834 1393</span><br/> <span style='background:yellow;'>YPL022W(RAD1) -0.116 5613 614</span><br/><br/><br/>ES Random Genesets = [0.35248574397421145] ES Random KOs = [0.35248574397421145] ES Random Genesets = [0.67081374340078015] ES Random KOs = [0.67081374340078015]<br/><br/>p Random Genesets = 0.67 p Random KOs = 0.54 p Random Genesets = 0.07 p Random KOs = 0.0 ES Pruned Random Genesets =[0.7762967721214068]p Pruned Random Genesets = 0.05 ES Pruned Random KOs =[0.7762967721214068] p Pruned Random KOs = 0.0<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 17<br/>-----Knockout Gene:YMR223W (UBP8)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDR392W(SPT3) 0.001 6156 72 <span style='background:yellow;'>YDR363W-A(SEM1) -0.042 4045 2183</span><br/>YPL047W(SGF11) 0.004 5782 446 YGR135W(PRE9) -0.015 1823 4405<br/><u>YMR223W</u>(<u>UBP8</u>) -1.286 4 6224 YHR200W(RPN10) 0.025 2775 3453<br/>YLR055C(SPT8) 0.111 311 5917<br/><br/><br/>ES Random Genesets = [0.84045438984842491] ES Random KOs = [0.84045438984842491] ES Random Genesets = [-0.35051380860629416] ES Random KOs = [-0.35051380860629416]<br/><br/>p Random Genesets = 0.0 p Random KOs = 0.0 p Random Genesets = 0.74 p Random KOs = 0.66 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 18<br/>-----Knockout Gene:YOR038C (HIR2)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YJL115W(ASF1) 0.059 1589 4639 <span style='background:yellow;'>YJL006C(CTK2) -0.038 3517 2711</span><br/><u>YOR038C</u>(<u>HIR2</u>) -0.670 4 6224 YKL139W(CTK1) -0.032 3074 3154<br/>YBL008W(HIR1) 0.033 3152 3076 YML112W(CTK3) -0.018 1910 4318<br/> YDR432W(NPL3) 0.025 2511 3717<br/><br/><br/>ES Random Genesets = [0.50481695568400764] ES Random KOs = [0.50481695568400764] ES Random Genesets = [-0.4352922286448298] ES Random KOs = [-0.4352922286448298]<br/><br/>p Random Genesets = 0.54 p Random KOs = 0.42 p Random Genesets = 0.87 p Random KOs = 0.83 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 19<br/>-----Knockout Gene:YCR009C (RVS161)-----<br/><br/>The length of the pathway opposite the knockout: 6<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDR388W(RVS167) 0.001 6183 47 <span style='background:yellow;'>YNL097C(PHO23) -0.114 5697 533</span><br/><u>YCR009C</u>(<u>RVS161</u>) -0.216 123 6107 <span style='background:yellow;'>YMR263W(SAP30) -0.087 5240 990</span><br/> YOL004W(SIN3) -0.020 1787 4443<br/> <span style='background:yellow;'>YIL084C(SDS3) -0.082 5099 1131</span><br/> <span style='background:yellow;'>YAL013W(DEP1) -0.141 5917 313</span><br/> YBR095C(RXT2) -0.021 1877 4353<br/><br/><br/>ES Random Genesets = [-0.97640449438202248] ES Random KOs = [-0.97640449438202248] ES Random Genesets = [0.67542904989294383] ES Random KOs = [0.67542904989294383]<br/><br/>p Random Genesets = 0.99 p Random KOs = 0.99 p Random Genesets = 0.01 p Random KOs = 0.0 ES Pruned Random Genesets =[0.81845906902086674]p Pruned Random Genesets = 0.02 ES Pruned Random KOs =[0.81845906902086674] p Pruned Random KOs = 0.0<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 20<br/>-----Knockout Gene:YNL330C (RPD3)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YNL097C(PHO23) -0.189 1749 4481 YDR392W(SPT3) 0.038 1263 4967<br/><u>YNL330C</u>(<u>RPD3</u>) -1.504 86 6144 YLR182W(SWI6) 0.019 625 5605<br/>YMR263W(SAP30) 0.387 560 5670 YLR055C(SPT8) -0.038 1263 4967<br/>YOL004W(SIN3) 0.060 4311 1919<br/>YIL084C(SDS3) 0.039 4965 1265<br/>YAL013W(DEP1) 0.064 4196 2034<br/>YGR044C(RME1) 0.061 4278 1952<br/><br/><br/>ES Random Genesets = [0.30448852775722546] ES Random KOs = [0.30448852775722546] ES Random Genesets = [-0.79727126805778492] ES Random KOs = [-0.79727126805778492]<br/><br/>p Random Genesets = 0.72 p Random KOs = 0.76 p Random Genesets = 0.97 p Random KOs = 0.99 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YMR263W (SAP30)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6260<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YNL097C(PHO23) 0.063 2896 3364 YDR392W(SPT3) 0.041 2440 3820<br/>YNL330C(RPD3) -0.072 2521 3739 YLR182W(SWI6) 0.012 769 5491<br/><u>YMR263W</u>(<u>SAP30</u>) -0.992 2 6258 <span style='background:yellow;'>YLR055C(SPT8) 0.148 5478 782</span><br/>YOL004W(SIN3) -0.053 3305 2955<br/>YIL084C(SDS3) -0.056 3185 3075<br/>YAL013W(DEP1) -0.133 1000 5260<br/>YGR044C(RME1) 0.092 1859 4401<br/><br/><br/>ES Random Genesets = [0.47795527156549522] ES Random KOs = [0.47795527156549522] ES Random Genesets = [0.50567731666170779] ES Random KOs = [0.50567731666170779]<br/><br/>p Random Genesets = 0.45 p Random KOs = 0.3 p Random Genesets = 0.43 p Random KOs = 0.41 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YOL004W (SIN3)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YNL097C(PHO23) 0.031 4513 1715 YDR392W(SPT3) 0.045 2419 3809<br/>YNL330C(RPD3) -0.026 4782 1446 YLR182W(SWI6) -0.018 1052 5176<br/>YMR263W(SAP30) -0.023 4954 1274 YLR055C(SPT8) -0.015 878 5350<br/><u>YOL004W</u>(<u>SIN3</u>) -0.688 23 6205<br/>YIL084C(SDS3) -0.038 4155 2073<br/>YAL013W(DEP1) 0.078 2556 3672<br/>YGR044C(RME1) -0.036 4264 1964<br/><br/><br/>ES Random Genesets = [-0.4039820166987797] ES Random KOs = [-0.4039820166987797] ES Random Genesets = [-0.61159280667951188] ES Random KOs = [-0.61159280667951188]<br/><br/>p Random Genesets = 0.93 p Random KOs = 0.96 p Random Genesets = 0.92 p Random KOs = 0.96 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YLR182W (SWI6)-----<br/><br/>The length of the pathway opposite the knockout: 7<br/><br/>The length of the list of log10 values: 6272<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDR392W(SPT3) -0.127 1687 4585 YNL097C(PHO23) -0.005 257 6015<br/><u>YLR182W</u>(<u>SWI6</u>) -0.817 49 6223 <span style='background:yellow;'>YNL330C(RPD3) -0.161 5127 1145</span><br/>YLR055C(SPT8) -0.007 5959 313 YMR263W(SAP30) 0.039 1857 4415<br/> YOL004W(SIN3) -0.037 1761 4511<br/> <span style='background:yellow;'>YIL084C(SDS3) -0.141 4847 1425</span><br/> YAL013W(DEP1) 0.048 2213 4059<br/> YGR044C(RME1) 0.053 2447 3825<br/><br/><br/>ES Random Genesets = [0.65990376513143023] ES Random KOs = [0.65990376513143023] ES Random Genesets = [0.31167272561004522] ES Random KOs = [0.31167272561004522]<br/><br/>p Random Genesets = 0.0 p Random KOs = 0.03 p Random Genesets = 0.74 p Random KOs = 0.74 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 21<br/>-----Knockout Gene:YMR055C (BUB2)-----<br/><br/>The length of the pathway opposite the knockout: 11<br/><br/>The length of the list of log10 values: 6261<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YJR053W(BFA1) -0.018 4606 1655 <span style='background:yellow;'>YLR197W(SIK1) 0.080 5446 815</span><br/><u>YMR055C</u>(<u>BUB2</u>) -0.622 21 6240 <span style='background:yellow;'>YDR217C(RAD9) -0.087 5573 688</span><br/> YCL029C(BIK1) 0.013 1248 5013<br/> YER016W(BIM1) 0.031 2826 3435<br/> <span style='background:yellow;'>YPL269W(KAR9) -0.048 4057 2204</span><br/> YDL101C(DUN1) 0.001 138 6123<br/> <span style='background:yellow;'>YDR150W(NUM1) -0.049 4132 2129</span><br/> <span style='background:yellow;'>YOR326W(MYO2) 0.115 5920 341</span><br/> <span style='background:yellow;'>YPL022W(RAD1) 0.056 4551 1710</span><br/> <span style='background:yellow;'>YNL116W(DMA2) 0.088 5587 674</span><br/> <span style='background:yellow;'>YNL250W(RAD50) -0.040 3524 2737</span><br/><br/><br/>ES Random Genesets = [-0.72160996645903208] ES Random KOs = [-0.72160996645903208] ES Random Genesets = [0.46808094661446642] ES Random KOs = [0.46808094661446642]<br/><br/>p Random Genesets = 0.73 p Random KOs = 0.97 p Random Genesets = 0.19 p Random KOs = 0.15 ES Pruned Random Genesets =[0.56284938508225524]p Pruned Random Genesets = 0.05 ES Pruned Random KOs =[0.56284938508225524] p Pruned Random KOs = 0.02<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 22<br/>-----Knockout Gene:YMR263W (SAP30)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6260<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YPL181W(CTI6) 0.063 2896 3364 YGL194C(HOS2) -0.005 323 5937<br/>YDR392W(SPT3) 0.041 3873 2387 YKR029C(SET3) -0.048 2777 3483<br/><u>YMR263W</u>(<u>SAP30</u>) -0.992 2 6258 YCR033W(SNT1) -0.001 81 6179<br/>YAL013W(DEP1) -0.133 1000 5260 <span style='background:yellow;'>YBR103W(SIF2) 0.191 5839 421</span><br/>YLR055C(SPT8) 0.148 798 5462<br/><br/><br/>ES Random Genesets = [0.49013896878034435] ES Random KOs = [0.49013896878034435] ES Random Genesets = [0.58008684995359971] ES Random KOs = [0.58008684995359971]<br/><br/>p Random Genesets = 0.39 p Random KOs = 0.28 p Random Genesets = 0.2 p Random KOs = 0.18 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 23<br/>-----Knockout Gene:YER016W (BIM1)-----<br/><br/>The length of the pathway opposite the knockout: 13<br/><br/>The length of the list of log10 values: 6260<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YML124C(TUB3) -0.111 1534 4726 <span style='background:yellow;'>YHR129C(ARP1) -0.145 5341 919</span><br/><u>YER016W</u>(<u>BIM1</u>) -0.823 10 6250 YLL049W(LDB18) 0.061 3147 3113<br/>YPL269W(KAR9) -0.013 5520 740 YDR488C(PAC11) -0.052 2777 3483<br/>YOR326W(MYO2) -0.014 5455 805 YPL155C(KIP2) -0.004 266 5994<br/> <span style='background:yellow;'>YDR424C(DYN2) 0.097 4386 1874</span><br/> <span style='background:yellow;'>YML085C(TUB1) -0.169 5611 649</span><br/> YDR150W(NUM1) 0.003 200 6060<br/> YPL174C(NIP100) -0.045 2462 3798<br/> <span style='background:yellow;'>YPR046W(MCM16) 0.074 3658 2602</span><br/> YMR294W(JNM1) -0.006 377 5883<br/> <span style='background:yellow;'>YCL029C(BIK1) -0.122 4999 1261</span><br/> YOR269W(PAC1) 0.007 438 5822<br/> YMR299C(DYN3) -0.058 3036 3224<br/><br/><br/>ES Random Genesets = [0.5002892635270666] ES Random KOs = [0.5002892635270666] ES Random Genesets = [0.3583842004082366] ES Random KOs = [0.3583842004082366]<br/><br/>p Random Genesets = 0.55 p Random KOs = 0.22 p Random Genesets = 0.46 p Random KOs = 0.31 ES Pruned Random Genesets =[0.58434504792332276]p Pruned Random Genesets = 0.16 ES Pruned Random KOs =[0.58434504792332276] p Pruned Random KOs = 0.07<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YMR294W (JNM1)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YHR129C(ARP1) 0.018 3861 2369 YML124C(TUB3) -0.021 2808 3422<br/>YLL049W(LDB18) 0.031 2498 3732 YER016W(BIM1) 0.019 2608 3622<br/>YDR488C(PAC11) -0.049 1280 4950 <span style='background:yellow;'>YPL269W(KAR9) -0.051 5080 1150</span><br/>YPL155C(KIP2) 0.022 3420 2810 YOR326W(MYO2) 0.010 1516 4714<br/>YDR424C(DYN2) -0.015 4198 2032<br/>YML085C(TUB1) -0.014 4319 1911<br/>YDR150W(NUM1) 0.041 1721 4509<br/>YPL174C(NIP100) -0.034 2240 3990<br/>YPR046W(MCM16) -0.021 3521 2709<br/><u>YMR294W</u>(<u>JNM1</u>) -0.302 25 6205<br/>YCL029C(BIK1) 0.070 576 5654<br/>YOR269W(PAC1) -0.042 1645 4585<br/>YMR299C(DYN3) -0.027 2870 3360<br/><br/><br/>ES Random Genesets = [0.3258426966292135] ES Random KOs = [0.3258426966292135] ES Random Genesets = [0.29241245645740033] ES Random KOs = [0.29241245645740033]<br/><br/>p Random Genesets = 0.74 p Random KOs = 0.72 p Random Genesets = 0.81 p Random KOs = 0.74 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 24<br/>-----Knockout Gene:YML007W (YAP1)-----<br/><br/>The length of the pathway opposite the knockout: 11<br/><br/>The length of the list of log10 values: 6258<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> <u>YML007W</u>(<u>YAP1</u>) -1.462 5 6253 YGL163C(RAD54) -0.006 682 5576<br/>YMR038C(CCS1) -0.098 554 5704 <span style='background:yellow;'>YDL059C(RAD59) 0.089 5581 677</span><br/>YJR104C(SOD1) -0.384 51 6207 YML032C(RAD52) 0.004 448 5810<br/>YML028W(TSA1) -0.548 22 6236 <span style='background:yellow;'>YER173W(RAD24) -0.075 5333 925</span><br/>YDL101C(DUN1) -0.440 44 6214 YER095W(RAD51) -0.015 1638 4620<br/> YOR368W(RAD17) -0.002 240 6018<br/> <span style='background:yellow;'>YDR076W(RAD55) 0.050 4455 1803</span><br/> YDR004W(RAD57) -0.013 1418 4840<br/> <span style='background:yellow;'>YLR288C(MEC3) -0.083 5486 772</span><br/> YPL194W(DDC1) -0.022 2381 3877<br/> YDR386W(MUS81) -0.007 790 5468<br/><br/><br/>ES Random Genesets = [0.91371045062320233] ES Random KOs = [0.91371045062320233] ES Random Genesets = [0.44487767593372507] ES Random KOs = [0.44487767593372507]<br/><br/>p Random Genesets = 0.0 p Random KOs = 0.0 p Random Genesets = 0.24 p Random KOs = 0.05 ES Pruned Random Genesets =[0.711888782358581]p Pruned Random Genesets = 0.07 ES Pruned Random KOs =[0.711888782358581] p Pruned Random KOs = 0.0<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YJR104C (SOD1)-----<br/><br/>The length of the pathway opposite the knockout: 11<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YML007W(YAP1) 0.147 406 5822 <span style='background:yellow;'>YGL163C(RAD54) 0.105 5337 891</span><br/>YMR038C(CCS1) -0.009 5468 760 <span style='background:yellow;'>YDL059C(RAD59) 0.064 4314 1914</span><br/><u>YJR104C</u>(<u>SOD1</u>) -1.419 1 6227 YML032C(RAD52) -0.017 1499 4729<br/>YML028W(TSA1) 0.116 731 5497 YER173W(RAD24) 0.010 907 5321<br/>YDL101C(DUN1) 0.012 5240 988 <span style='background:yellow;'>YER095W(RAD51) -0.043 3329 2899</span><br/> <span style='background:yellow;'>YOR368W(RAD17) -0.086 4978 1250</span><br/> YDR076W(RAD55) 0.034 2757 3471<br/> YDR004W(RAD57) 0.003 314 5914<br/> YLR288C(MEC3) -0.031 2549 3679<br/> <span style='background:yellow;'>YPL194W(DDC1) 0.042 3248 2980</span><br/> YDR386W(MUS81) -0.007 670 5558<br/><br/><br/>ES Random Genesets = [0.74249575898466957] ES Random KOs = [0.74249575898466957] ES Random Genesets = [0.29591032483032675] ES Random KOs = [0.29591032483032675]<br/><br/>p Random Genesets = 0.03 p Random KOs = 0.02 p Random Genesets = 0.68 p Random KOs = 0.59 ES Pruned Random Genesets =[0.52151573538856777]p Pruned Random Genesets = 0.25 ES Pruned Random KOs =[0.52151573538856777] p Pruned Random KOs = 0.27<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YDR004W (RAD57)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YGL163C(RAD54) 0.107 823 5405 YML007W(YAP1) -0.015 1232 4996<br/>YDL059C(RAD59) 0.009 5519 709 <span style='background:yellow;'>YMR038C(CCS1) -0.046 3340 2888</span><br/>YML032C(RAD52) -0.039 3349 2879 <span style='background:yellow;'>YJR104C(SOD1) 0.075 4642 1586</span><br/>YER173W(RAD24) -0.036 3530 2698 <span style='background:yellow;'>YML028W(TSA1) -0.088 5016 1212</span><br/>YER095W(RAD51) 0.279 84 6144 YDL101C(DUN1) 0.040 3008 3220<br/>YOR368W(RAD17) -0.049 2786 3442<br/>YDR076W(RAD55) 0.044 3059 3169<br/><u>YDR004W</u>(<u>RAD57</u>) -0.548 7 6221<br/>YLR288C(MEC3) -0.019 4754 1474<br/>YPL194W(DDC1) 0.071 1777 4451<br/>YDR386W(MUS81) 0.020 4691 1537<br/><br/><br/>ES Random Genesets = [0.31990030142343406] ES Random KOs = [0.31990030142343406] ES Random Genesets = [0.41151008179491422] ES Random KOs = [0.41151008179491422]<br/><br/>p Random Genesets = 0.7 p Random KOs = 0.82 p Random Genesets = 0.52 p Random KOs = 0.6 ES Pruned Random Genesets =[0.5362877328195248]p Pruned Random Genesets = 0.48 ES Pruned Random KOs =[0.5362877328195248] p Pruned Random KOs = 0.53<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 25<br/>-----Knockout Gene:YML007W (YAP1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6258<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> <u>YML007W</u>(<u>YAP1</u>) -1.462 5 6253 YLR320W(MMS22) 0.018 1956 4302<br/>YER095W(RAD51) -0.015 4720 1538 <span style='background:yellow;'>YHR154W(RTT107) -0.045 4169 2089</span><br/>YNL297C(MON2) -0.031 3158 3100 <span style='background:yellow;'>YJL047C(RTT101) 0.060 4903 1355</span><br/>YLR182W(SWI6) -0.038 2612 3646<br/>YCR066W(RAD18) 0.016 4618 1640<br/>YMR224C(MRE11) 0.007 5574 684<br/>YDR359C(EAF1) -0.078 884 5374<br/>YOR144C(ELG1) -0.002 6121 137<br/>YCL010C(SGF29) -0.016 4618 1640<br/>YML028W(TSA1) -0.548 22 6236<br/>YDR369C(XRS2) -0.011 5163 1095<br/>YJL092W(SRS2) -0.033 2985 3273<br/>YKL113C(RAD27) 0.018 4405 1853<br/>YGL058W(RAD6) 0.028 3393 2865<br/>YDL101C(DUN1) -0.440 44 6214<br/>YNL298W(CLA4) -0.024 3767 2491<br/>YMR190C(SGS1) 0.007 5574 684<br/>YNL250W(RAD50) -0.029 3313 2945<br/><br/><br/>ES Random Genesets = [0.25927109962850692] ES Random KOs = [0.25927109962850692] ES Random Genesets = [0.48882057734326395] ES Random KOs = [0.48882057734326395]<br/><br/>p Random Genesets = 0.74 p Random KOs = 0.71 p Random Genesets = 0.49 p Random KOs = 0.29 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YLR182W (SWI6)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6272<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YML007W(YAP1) 0.029 4899 1373 <span style='background:yellow;'>YLR320W(MMS22) 0.194 5448 824</span><br/>YER095W(RAD51) 0.440 152 6120 <span style='background:yellow;'>YHR154W(RTT107) 0.087 3643 2629</span><br/>YNL297C(MON2) -0.034 4677 1595 YJL047C(RTT101) 0.013 673 5599<br/><u>YLR182W</u>(<u>SWI6</u>) -0.817 49 6223<br/>YCR066W(RAD18) -0.052 3908 2364<br/>YMR224C(MRE11) 0.116 1912 4360<br/>YDR359C(EAF1) 0.221 645 5627<br/>YOR144C(ELG1) -0.092 2526 3746<br/>YCL010C(SGF29) -0.152 1276 4996<br/>YML028W(TSA1) 0.152 1276 4996<br/>YDR369C(XRS2) -0.036 4584 1688<br/>YJL092W(SRS2) 0.071 3213 3059<br/>YKL113C(RAD27) -0.006 6013 259<br/>YGL058W(RAD6) -0.058 3654 2618<br/>YDL101C(DUN1) 0.169 1064 5208<br/>YNL298W(CLA4) 0.151 1292 4980<br/>YMR190C(SGS1) -0.048 4100 2172<br/>YNL250W(RAD50) -0.118 1861 4411<br/><br/><br/>ES Random Genesets = [0.37824136214799148] ES Random KOs = [0.37824136214799148] ES Random Genesets = [0.51190878978588561] ES Random KOs = [0.51190878978588561]<br/><br/>p Random Genesets = 0.69 p Random KOs = 0.63 p Random Genesets = 0.44 p Random KOs = 0.35 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YKL113C (RAD27)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6227<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YML007W(YAP1) 0.063 1080 5147 YLR320W(MMS22) 0.011 1405 4822<br/>YER095W(RAD51) 0.014 4586 1641 <span style='background:yellow;'>YHR154W(RTT107) -0.048 4549 1678</span><br/>YNL297C(MON2) -0.028 3163 3064 <span style='background:yellow;'>YJL047C(RTT101) -0.038 3978 2249</span><br/>YLR182W(SWI6) 0.006 5553 674<br/>YCR066W(RAD18) -0.027 3252 2975<br/>YMR224C(MRE11) 0.029 3076 3151<br/>YDR359C(EAF1) 0.014 4586 1641<br/>YOR144C(ELG1) 0.002 6047 180<br/>YCL010C(SGF29) 0.002 6047 180<br/>YML028W(TSA1) 0.034 2634 3593<br/>YDR369C(XRS2) -0.293 37 6190<br/>YJL092W(SRS2) 0.016 4377 1850<br/><u>YKL113C</u>(<u>RAD27</u>) -0.188 90 6137<br/>YGL058W(RAD6) -0.039 2247 3980<br/>YDL101C(DUN1) -0.002 6047 180<br/>YNL298W(CLA4) 0.016 4377 1850<br/>YMR190C(SGS1) 0.004 5796 431<br/>YNL250W(RAD50) 0.052 1525 4702<br/><br/><br/>ES Random Genesets = [0.26699239143777387] ES Random KOs = [0.26699239143777387] ES Random Genesets = [0.49736895650338797] ES Random KOs = [0.49736895650338797]<br/><br/>p Random Genesets = 0.72 p Random KOs = 0.72 p Random Genesets = 0.48 p Random KOs = 0.41 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YGL058W (RAD6)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6274<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YML007W(YAP1) 0.011 5792 482 YLR320W(MMS22) 0.060 2514 3760<br/>YER095W(RAD51) 0.227 552 5722 YHR154W(RTT107) -0.040 1735 4539<br/>YNL297C(MON2) 0.036 4763 1511 <span style='background:yellow;'>YJL047C(RTT101) 0.129 4554 1720</span><br/>YLR182W(SWI6) 0.038 4668 1606<br/>YCR066W(RAD18) -0.000 6274 0<br/>YMR224C(MRE11) -0.402 108 6166<br/>YDR359C(EAF1) -0.421 98 6176<br/>YOR144C(ELG1) -0.054 4017 2257<br/>YCL010C(SGF29) -0.127 1778 4496<br/>YML028W(TSA1) 0.058 3868 2406<br/>YDR369C(XRS2) 0.034 4854 1420<br/>YJL092W(SRS2) 0.068 3489 2785<br/>YKL113C(RAD27) -0.090 2761 3513<br/><u>YGL058W</u>(<u>RAD6</u>) -0.602 45 6229<br/>YDL101C(DUN1) 0.210 672 5602<br/>YNL298W(CLA4) -0.046 4334 1940<br/>YMR190C(SGS1) 0.149 1388 4886<br/>YNL250W(RAD50) -0.076 3223 3051<br/><br/><br/>ES Random Genesets = [0.32916061578986744] ES Random KOs = [0.32916061578986744] ES Random Genesets = [0.27653809372011473] ES Random KOs = [0.27653809372011473]<br/><br/>p Random Genesets = 0.69 p Random KOs = 0.68 p Random Genesets = 0.71 p Random KOs = 0.71 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YNL298W (CLA4)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YML007W(YAP1) -0.050 2768 3460 YLR320W(MMS22) 0.016 1277 4951<br/>YER095W(RAD51) 0.069 1797 4431 <span style='background:yellow;'>YHR154W(RTT107) -0.045 3225 3003</span><br/>YNL297C(MON2) -0.065 1992 4236 <span style='background:yellow;'>YJL047C(RTT101) -0.062 4136 2092</span><br/>YLR182W(SWI6) -0.022 4583 1645<br/>YCR066W(RAD18) 0.002 6113 115<br/>YMR224C(MRE11) 0.047 2948 3280<br/>YDR359C(EAF1) 0.084 1280 4948<br/>YOR144C(ELG1) -0.072 1679 4549<br/>YCL010C(SGF29) -0.057 2376 3852<br/>YML028W(TSA1) 0.062 2133 4095<br/>YDR369C(XRS2) -0.058 2318 3910<br/>YJL092W(SRS2) 0.013 5274 954<br/>YKL113C(RAD27) 0.066 1943 4285<br/>YGL058W(RAD6) -0.037 3572 2656<br/>YDL101C(DUN1) -0.042 3235 2993<br/><u>YNL298W</u>(<u>CLA4</u>) -0.883 4 6224<br/>YMR190C(SGS1) 0.058 2318 3910<br/>YNL250W(RAD50) -0.121 482 5746<br/><br/><br/>ES Random Genesets = [0.39585487616001191] ES Random KOs = [0.39585487616001191] ES Random Genesets = [0.36998758900605422] ES Random KOs = [0.36998758900605422]<br/><br/>p Random Genesets = 0.7 p Random KOs = 0.6 p Random Genesets = 0.72 p Random KOs = 0.61 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YMR190C (SGS1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6227<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YML007W(YAP1) -0.083 1340 4887 <span style='background:yellow;'>YLR320W(MMS22) -0.114 5592 635</span><br/>YER095W(RAD51) 0.160 273 5954 <span style='background:yellow;'>YHR154W(RTT107) -0.092 5192 1035</span><br/>YNL297C(MON2) -0.004 5935 292 <span style='background:yellow;'>YJL047C(RTT101) -0.074 4649 1578</span><br/>YLR182W(SWI6) -0.048 2756 3471<br/>YCR066W(RAD18) 0.006 5781 446<br/>YMR224C(MRE11) -0.008 5610 617<br/>YDR359C(EAF1) -0.017 4926 1301<br/>YOR144C(ELG1) -0.095 974 5253<br/>YCL010C(SGF29) 0.028 4022 2205<br/>YML028W(TSA1) -0.052 2543 3684<br/>YDR369C(XRS2) -0.086 1255 4972<br/>YJL092W(SRS2) -0.100 880 5347<br/>YKL113C(RAD27) -0.002 6105 122<br/>YGL058W(RAD6) -0.056 2340 3887<br/>YDL101C(DUN1) -0.025 4244 1983<br/>YNL298W(CLA4) 0.087 1217 5010<br/><u>YMR190C</u>(<u>SGS1</u>) -0.357 28 6199<br/>YNL250W(RAD50) -0.023 4407 1820<br/><br/><br/>ES Random Genesets = [0.39368183538458479] ES Random KOs = [0.39368183538458479] ES Random Genesets = [0.74658744178577163] ES Random KOs = [0.74658744178577163]<br/><br/>p Random Genesets = 0.65 p Random KOs = 0.7 p Random Genesets = 0.09 p Random KOs = 0.04 ES Pruned Random Genesets =[0.74658744178577163]p Pruned Random Genesets = 0.06 ES Pruned Random KOs =[0.74658744178577163] p Pruned Random KOs = 0.04<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 26<br/>-----Knockout Gene:YNL271C (BNI1)-----<br/><br/>The length of the pathway opposite the knockout: 49<br/><br/>The length of the list of log10 values: 6279<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> <u>YNL271C</u>(<u>BNI1</u>) -0.256 55 6224 YDR309C(GIC2) 0.020 2272 4007<br/>YLR229C(CDC42) 0.017 4401 1878 <span style='background:yellow;'>YLR319C(BUD6) 0.033 3475 2804</span><br/> <span style='background:yellow;'>YDR293C(SSD1) 0.049 4487 1792</span><br/> YNL233W(BNI4) -0.011 1327 4952<br/> YBL051C(PIN4) -0.028 3067 3212<br/> YMR186W(HSC82) -0.011 1327 4952<br/> <span style='background:yellow;'>YNL272C(SEC2) -0.081 5535 744</span><br/> YJL187C(SWE1) -0.023 2578 3701<br/> <span style='background:yellow;'>YLR006C(SSK1) 0.036 3701 2578</span><br/> <span style='background:yellow;'>YAL038W(CDC19) 0.080 5518 761</span><br/> YAL041W(CDC24) -0.009 1118 5161<br/> YBR077C(SLM4) -0.004 536 5743<br/> <span style='background:yellow;'>YLL008W(DRS1) -0.035 3626 2653</span><br/> YFL005W(SEC4) -0.003 409 5870<br/> <span style='background:yellow;'>YGR175C(ERG1) -0.064 5109 1170</span><br/> YAL020C(ATS1) 0.019 2174 4105<br/> YDR166C(SEC5) 0.021 2377 3902<br/> <span style='background:yellow;'>YDR159W(SAC3) -0.030 3246 3033</span><br/> YLL021W(SPA2) -0.005 663 5616<br/> <span style='background:yellow;'>YNL293W(MSB3) 0.059 4925 1354</span><br/> YKR048C(NAP1) 0.021 2377 3902<br/> YPR105C(COG4) -0.017 1983 4296<br/> YIL118W(RHO3) 0.025 2792 3487<br/> <span style='background:yellow;'>YDR507C(GIN4) 0.050 4536 1743</span><br/> <span style='background:yellow;'>YER149C(PEA2) -0.043 4143 2136</span><br/> YDL225W(SHS1) -0.010 1224 5055<br/> YIR022W(SEC11) 0.007 891 5388<br/> YCR077C(PAT1) -0.016 1876 4403<br/> <span style='background:yellow;'>YHR206W(SKN7) -0.069 5253 1026</span><br/> YKL007W(CAP1) 0.003 409 5870<br/> <span style='background:yellow;'>YER111C(SWI4) 0.036 3701 2578</span><br/> YPL161C(BEM4) -0.003 409 5870<br/> YPR055W(SEC8) -0.003 409 5870<br/> YDL031W(DBP10) 0.004 536 5743<br/> <span style='background:yellow;'>YNL289W(PCL1) 0.064 5109 1170</span><br/> YER008C(SEC3) 0.017 1983 4296<br/> <span style='background:yellow;'>YIL034C(CAP2) 0.035 3626 2653</span><br/> YIL159W(BNR1) -0.017 1983 4296<br/> <span style='background:yellow;'>YGL233W(SEC15) -0.039 3894 2385</span><br/> YNL298W(CLA4) 0.000 57 6222<br/> YLR166C(SEC10) 0.012 1436 4843<br/> YOR122C(PFY1) -0.019 2174 4105<br/> YGR103W(NOP7) 0.026 2894 3385<br/> YBR200W(BEM1) 0.002 298 5981<br/> YDR310C(SUM1) -0.020 2272 4007<br/> YDL145C(COP1) -0.005 663 5616<br/> YLR056W(ERG3) -0.027 2983 3296<br/> YPL256C(CLN2) -0.003 409 5870<br/> <span style='background:yellow;'>YDL047W(SIT4) -0.040 3961 2318</span><br/><br/><br/>ES Random Genesets = [-0.68418537983755379] ES Random KOs = [-0.68418537983755379] ES Random Genesets = [0.20085047202403261] ES Random KOs = [0.20085047202403261]<br/><br/>p Random Genesets = 0.74 p Random KOs = 0.85 p Random Genesets = 0.98 p Random KOs = 0.91 ES Pruned Random Genesets =[0.51696129956999526]p Pruned Random Genesets = 0.01 ES Pruned Random KOs =[0.51696129956999526] p Pruned Random KOs = 0.0<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YLR229C (CDC42)-----<br/><br/>The length of the pathway opposite the knockout: 49<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YNL271C(BNI1) 0.031 4850 1378 <span style='background:yellow;'>YDR309C(GIC2) 0.323 6083 145</span><br/><u>YLR229C</u>(<u>CDC42</u>) -0.530 27 6201 <span style='background:yellow;'>YLR319C(BUD6) -0.105 3908 2320</span><br/> <span style='background:yellow;'>YDR293C(SSD1) 0.196 5463 765</span><br/> <span style='background:yellow;'>YNL233W(BNI4) -0.139 4647 1581</span><br/> YBL051C(PIN4) 0.069 2849 3379<br/> YMR186W(HSC82) -0.033 1511 4717<br/> YNL272C(SEC2) -0.043 1916 4312<br/> <span style='background:yellow;'>YJL187C(SWE1) 0.127 4399 1829</span><br/> <span style='background:yellow;'>YLR006C(SSK1) 0.138 4619 1609</span><br/> <span style='background:yellow;'>YAL038W(CDC19) 0.212 5601 627</span><br/> YAL041W(CDC24) -0.059 2514 3714<br/> <span style='background:yellow;'>YBR077C(SLM4) 0.180 5295 933</span><br/> <span style='background:yellow;'>YLL008W(DRS1) -0.183 5336 892</span><br/> YFL005W(SEC4) 0.009 434 5794<br/> YGR175C(ERG1) 0.069 2849 3379<br/> YAL020C(ATS1) 0.062 2607 3621<br/> YDR166C(SEC5) -0.077 3097 3131<br/> <span style='background:yellow;'>YDR159W(SAC3) -0.151 4867 1361</span><br/> YLL021W(SPA2) -0.034 1554 4674<br/> <span style='background:yellow;'>YNL293W(MSB3) 0.209 5572 656</span><br/> <span style='background:yellow;'>YKR048C(NAP1) 0.127 4399 1829</span><br/> <span style='background:yellow;'>YPR105C(COG4) -0.170 5146 1082</span><br/> <span style='background:yellow;'>YIL118W(RHO3) -0.103 3838 2390</span><br/> <span style='background:yellow;'>YDR507C(GIN4) 0.119 4210 2018</span><br/> YER149C(PEA2) -0.059 2514 3714<br/> YDL225W(SHS1) -0.054 2335 3893<br/> YIR022W(SEC11) 0.037 1684 4544<br/> YCR077C(PAT1) -0.008 397 5831<br/> <span style='background:yellow;'>YHR206W(SKN7) 0.118 4188 2040</span><br/> YKL007W(CAP1) 0.050 2171 4057<br/> <span style='background:yellow;'>YER111C(SWI4) -0.263 5897 331</span><br/> YPL161C(BEM4) -0.048 2087 4141<br/> YPR055W(SEC8) -0.077 3097 3131<br/> <span style='background:yellow;'>YDL031W(DBP10) -0.129 4440 1788</span><br/> YNL289W(PCL1) 0.058 2477 3751<br/> <span style='background:yellow;'>YER008C(SEC3) -0.091 3522 2706</span><br/> YIL034C(CAP2) 0.037 1684 4544<br/> <span style='background:yellow;'>YIL159W(BNR1) -0.094 3609 2619</span><br/> YGL233W(SEC15) -0.062 2607 3621<br/> YNL298W(CLA4) 0.070 2885 3343<br/> <span style='background:yellow;'>YLR166C(SEC10) -0.160 5020 1208</span><br/> YOR122C(PFY1) 0.068 2805 3423<br/> <span style='background:yellow;'>YGR103W(NOP7) -0.326 6086 142</span><br/> YBR200W(BEM1) -0.076 3070 3158<br/> YDR310C(SUM1) 0.037 1684 4544<br/> YDL145C(COP1) 0.076 3070 3158<br/> <span style='background:yellow;'>YLR056W(ERG3) 0.265 5910 318</span><br/> <span style='background:yellow;'>YPL256C(CLN2) 0.744 6219 9</span><br/> YDL047W(SIT4) 0.058 2477 3751<br/><br/><br/>ES Random Genesets = [-0.77231856133590238] ES Random KOs = [-0.77231856133590238] ES Random Genesets = [0.29776520789235583] ES Random KOs = [0.29776520789235583]<br/><br/>p Random Genesets = 0.81 p Random KOs = 0.91 p Random Genesets = 0.57 p Random KOs = 0.43 ES Pruned Random Genesets =[0.56551059730250475]p Pruned Random Genesets = 0.0 ES Pruned Random KOs =[0.56551059730250475] p Pruned Random KOs = 0.0<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 27<br/>-----Knockout Gene:YER007W (PAC2)-----<br/><br/>The length of the pathway opposite the knockout: 16<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YOR349W(CIN1) 0.014 4559 1669 <span style='background:yellow;'>YHR129C(ARP1) -0.078 5633 595</span><br/><u>YER007W</u>(<u>PAC2</u>) -0.677 3 6225 YML124C(TUB3) -0.004 588 5640<br/> YDR488C(PAC11) 0.014 1772 4456<br/> YPL155C(KIP2) 0.003 455 5773<br/> <span style='background:yellow;'>YDR424C(DYN2) 0.038 4019 2209</span><br/> YML085C(TUB1) -0.022 2653 3575<br/> <span style='background:yellow;'>YFL037W(TUB2) -0.044 4436 1792</span><br/> <span style='background:yellow;'>YPL174C(NIP100) -0.058 5088 1140</span><br/> <span style='background:yellow;'>YMR294W(JNM1) 0.073 5535 693</span><br/> <span style='background:yellow;'>YCL029C(BIK1) 0.042 4318 1910</span><br/> YCL016C(DCC1) -0.016 1987 4241<br/> YNL148C(ALF1) -0.004 588 5640<br/> <span style='background:yellow;'>YOR265W(RBL2) 0.047 4590 1638</span><br/> YMR078C(CTF18) -0.024 2855 3373<br/> YMR299C(DYN3) 0.006 823 5405<br/> <span style='background:yellow;'>YPL269W(KAR9) -0.035 3780 2448</span><br/><br/><br/>ES Random Genesets = [-0.71547848426461147] ES Random KOs = [-0.71547848426461147] ES Random Genesets = [0.36831670934458016] ES Random KOs = [0.36831670934458016]<br/><br/>p Random Genesets = 0.99 p Random KOs = 0.99 p Random Genesets = 0.41 p Random KOs = 0.3 ES Pruned Random Genesets =[0.60693641618497107]p Pruned Random Genesets = 0.03 ES Pruned Random KOs =[0.60693641618497107] p Pruned Random KOs = 0.02<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 28<br/>-----Knockout Gene:YPR119W (CLB2)-----<br/><br/>The length of the pathway opposite the knockout: 9<br/><br/>The length of the list of log10 values: 6331<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> <u>YPR119W</u>(<u>CLB2</u>) -0.880 4 6327 <span style='background:yellow;'>YJL076W(NET1) 0.044 3199 3132</span><br/>YGR092W(DBF2) 0.045 3130 3201 <span style='background:yellow;'>YML064C(TEM1) 0.045 3267 3064</span><br/>YMR001C(CDC5) 0.018 4962 1369 YFR028C(CDC14) -0.027 2076 4255<br/>YGL003C(CDH1) 0.014 5264 1067 <span style='background:yellow;'>YDR113C(PDS1) -0.052 3665 2666</span><br/> YBR160W(CDC28) 0.020 1592 4739<br/> <span style='background:yellow;'>YDR146C(SWI5) 0.049 3501 2830</span><br/> <span style='background:yellow;'>YBR158W(AMN1) -0.104 5376 955</span><br/> YAR019C(CDC15) 0.004 347 5984<br/> YLR079W(SIC1) -0.039 2885 3446<br/><br/><br/>ES Random Genesets = [-0.4839677776022745] ES Random KOs = [-0.4839677776022745] ES Random Genesets = [0.30072276573361278] ES Random KOs = [0.30072276573361278]<br/><br/>p Random Genesets = 0.81 p Random KOs = 0.89 p Random Genesets = 0.8 p Random KOs = 0.65 ES Pruned Random Genesets =[0.50529142315589959]p Pruned Random Genesets = 0.41 ES Pruned Random KOs =[0.50529142315589959] p Pruned Random KOs = 0.19<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YDR146C (SWI5)-----<br/><br/>The length of the pathway opposite the knockout: 4<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YJL076W(NET1) 0.014 4665 1563 YPR119W(CLB2) 0.024 2654 3574<br/>YML064C(TEM1) -0.035 2677 3551 YGR092W(DBF2) 0.029 3124 3104<br/>YFR028C(CDC14) -0.026 3470 2758 YMR001C(CDC5) 0.025 2756 3472<br/>YDR113C(PDS1) 0.022 3840 2388 YGL003C(CDH1) -0.026 2853 3375<br/>YBR160W(CDC28) -0.006 5584 644<br/><u>YDR146C</u>(<u>SWI5</u>) -0.707 4 6224<br/>YBR158W(AMN1) -0.054 1525 4703<br/>YAR019C(CDC15) 0.065 1104 5124<br/>YLR079W(SIC1) -0.216 91 6137<br/><br/><br/>ES Random Genesets = [0.34679211428696821] ES Random KOs = [0.34679211428696821] ES Random Genesets = [-0.49839434810533079] ES Random KOs = [-0.49839434810533079]<br/><br/>p Random Genesets = 0.81 p Random KOs = 0.56 p Random Genesets = 0.98 p Random KOs = 0.88 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 29<br/>-----Knockout Gene:YHR013C (ARD1)-----<br/><br/>The length of the pathway opposite the knockout: 50<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL040C(NAT1) -0.121 315 5913 YDR378C(LSM6) -0.022 2321 3907<br/><u>YHR013C</u>(<u>ARD1</u>) -0.864 3 6225 <span style='background:yellow;'>YGR231C(PHB2) 0.086 5511 717</span><br/> <span style='background:yellow;'>YDL142C(CRD1) 0.050 4329 1899</span><br/> YBR245C(ISW1) -0.002 312 5916<br/> YNL070W(TOM7) -0.001 181 6047<br/> YPL084W(BRO1) 0.004 514 5714<br/> YER017C(AFG3) 0.025 2611 3617<br/> <span style='background:yellow;'>YJL006C(CTK2) 0.047 4172 2056</span><br/> YOR308C(SNU66) 0.001 181 6047<br/> YBR278W(DPB3) 0.015 1649 4579<br/> YJL124C(LSM1) 0.023 2420 3808<br/> <span style='background:yellow;'>YER122C(GLO3) -0.035 3378 2850</span><br/> YAL048C(GEM1) 0.002 312 5916<br/> YGR077C(PEX8) -0.019 2027 4201<br/> <span style='background:yellow;'>YLR396C(VPS33) 0.072 5196 1032</span><br/> YJL210W(PEX2) -0.000 60 6168<br/> <span style='background:yellow;'>YBR175W(SWD3) 0.071 5171 1057</span><br/> <span style='background:yellow;'>YPL178W(CBC2) 0.037 3528 2700</span><br/> YPR101W(SNT309) -0.004 514 5714<br/> <span style='background:yellow;'>YMR231W(PEP5) -0.033 3237 2991</span><br/> YMR026C(PEX12) 0.015 1649 4579<br/> <span style='background:yellow;'>YDR244W(PEX5) 0.077 5322 906</span><br/> <span style='background:yellow;'>YOR147W(MDM32) 0.052 4421 1807</span><br/> <span style='background:yellow;'>YGL153W(PEX14) 0.045 4055 2173</span><br/> <span style='background:yellow;'>YDR265W(PEX10) 0.034 3316 2912</span><br/> <span style='background:yellow;'>YHR194W(MDM31) -0.037 3528 2700</span><br/> YAL055W(PEX22) 0.020 2128 4100<br/> <span style='background:yellow;'>YDL229W(SSB1) -0.091 5587 641</span><br/> YDR469W(SDC1) -0.032 3157 3071<br/> <span style='background:yellow;'>YLR148W(PEP3) 0.079 5363 865</span><br/> YDR323C(PEP7) 0.004 514 5714<br/> YLR191W(PEX13) 0.031 3078 3150<br/> <span style='background:yellow;'>YGR208W(SER2) 0.054 4533 1695</span><br/> <span style='background:yellow;'>YPL213W(LEA1) 0.065 4973 1255</span><br/> <span style='background:yellow;'>YMR272C(SCS7) -0.107 5796 432</span><br/> <span style='background:yellow;'>YGR180C(RNR4) 0.076 5296 932</span><br/> YLR357W(RSC2) 0.022 2321 3907<br/> YDL002C(NHP10) 0.029 2914 3314<br/> <span style='background:yellow;'>YGR133W(PEX4) 0.037 3528 2700</span><br/> <span style='background:yellow;'>YPL106C(SSE1) -0.054 4533 1695</span><br/> YLR067C(PET309) 0.016 1735 4493<br/> YMR293C(LRC6) 0.029 2914 3314<br/> <span style='background:yellow;'>YML112W(CTK3) 0.059 4741 1487</span><br/> YNL214W(PEX17) 0.023 2420 3808<br/> YMR165C(PAH1) 0.002 312 5916<br/> <span style='background:yellow;'>YIR009W(MSL1) 0.057 4651 1577</span><br/> <span style='background:yellow;'>YKL213C(DOA1) 0.053 4476 1752</span><br/> <span style='background:yellow;'>YJR139C(HOM6) 0.036 3444 2784</span><br/> YJL183W(MNN11) -0.023 2420 3808<br/> <span style='background:yellow;'>YGL095C(VPS45) 0.054 4533 1695</span><br/><br/><br/>ES Random Genesets = [0.95006422607578678] ES Random KOs = [0.95006422607578678] ES Random Genesets = [0.29657927673419604] ES Random KOs = [0.29657927673419604]<br/><br/>p Random Genesets = 0.05 p Random KOs = 0.0 p Random Genesets = 0.53 p Random KOs = 0.16 ES Pruned Random Genesets =[0.51974951830443161]p Pruned Random Genesets = 0.0 ES Pruned Random KOs =[0.51974951830443161] p Pruned Random KOs = 0.0<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 30<br/>-----Knockout Gene:YKR101W (SIR1)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6227<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDR378C(LSM6) -0.095 135 6092 YJL115W(ASF1) 0.001 208 6019<br/>YLR399C(BDF1) -0.011 4689 1538 <span style='background:yellow;'>YJR140C(HIR3) -0.026 3571 2656</span><br/>YPL042C(SSN3) 0.023 3089 3138 YBR215W(HPC2) 0.012 1822 4405<br/>YNL147W(LSM7) -0.043 1411 4816 YOR038C(HIR2) 0.012 1822 4405<br/>YGL207W(SPT16) -0.029 2454 3773 YBL008W(HIR1) -0.010 1536 4691<br/>YLR418C(CDC73) 0.002 6017 210<br/>YGR063C(SPT4) -0.024 2983 3244<br/>YCR077C(PAT1) 0.048 1134 5093<br/><u>YKR101W</u>(<u>SIR1</u>) -0.241 16 6211<br/>YML102W(CAC2) 0.021 3351 2876<br/>YML069W(POB3) -0.039 1664 4563<br/>YMR127C(SAS2) -0.015 4106 2121<br/>YJL124C(LSM1) -0.011 4689 1538<br/>YBR195C(MSI1) 0.007 5297 930<br/>YPR018W(RLF2) 0.002 6017 210<br/><br/><br/>ES Random Genesets = [0.30409047438614034] ES Random KOs = [0.30409047438614034] ES Random Genesets = [-0.42652962903484826] ES Random KOs = [-0.42652962903484826]<br/><br/>p Random Genesets = 0.75 p Random KOs = 0.59 p Random Genesets = 0.92 p Random KOs = 0.85 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YOR038C (HIR2)-----<br/><br/>The length of the pathway opposite the knockout: 15<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YJL115W(ASF1) 0.059 1589 4639 <span style='background:yellow;'>YDR378C(LSM6) -0.057 4595 1633</span><br/>YJR140C(HIR3) -0.026 3715 2513 <span style='background:yellow;'>YLR399C(BDF1) -0.066 4915 1313</span><br/>YBR215W(HPC2) -0.023 3963 2265 <span style='background:yellow;'>YPL042C(SSN3) -0.088 5500 728</span><br/><u>YOR038C</u>(<u>HIR2</u>) -0.670 4 6224 <span style='background:yellow;'>YNL147W(LSM7) -0.056 4547 1681</span><br/>YBL008W(HIR1) 0.033 3152 3076 <span style='background:yellow;'>YGL207W(SPT16) -0.036 3370 2858</span><br/> <span style='background:yellow;'>YLR418C(CDC73) 0.036 3370 2858</span><br/> <span style='background:yellow;'>YGR063C(SPT4) -0.084 5422 806</span><br/> <span style='background:yellow;'>YCR077C(PAT1) 0.039 3576 2652</span><br/> <span style='background:yellow;'>YKR101W(SIR1) 0.106 5765 463</span><br/> YML102W(CAC2) 0.007 821 5407<br/> YML069W(POB3) 0.009 1029 5199<br/> <span style='background:yellow;'>YMR127C(SAS2) -0.053 4394 1834</span><br/> YJL124C(LSM1) 0.003 397 5831<br/> YBR195C(MSI1) 0.012 1330 4898<br/> YPR018W(RLF2) -0.017 1809 4419<br/><br/><br/>ES Random Genesets = [0.37716763005780352] ES Random KOs = [0.37716763005780352] ES Random Genesets = [0.43516448394019647] ES Random KOs = [0.43516448394019647]<br/><br/>p Random Genesets = 0.39 p Random KOs = 0.21 p Random Genesets = 0.22 p Random KOs = 0.13 ES Pruned Random Genesets =[0.54110468850353244]p Pruned Random Genesets = 0.07 ES Pruned Random KOs =[0.54110468850353244] p Pruned Random KOs = 0.04<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 31<br/>-----Knockout Gene:YNL330C (RPD3)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YNL097C(PHO23) -0.189 1749 4481 <span style='background:yellow;'>YPL101W(ELP4) 0.117 3358 2872</span><br/><u>YNL330C</u>(<u>RPD3</u>) -1.504 86 6144 <span style='background:yellow;'>YMR312W(ELP6) 0.269 5209 1021</span><br/>YMR263W(SAP30) 0.387 560 5670 YPL086C(ELP3) 0.028 912 5318<br/>YOL004W(SIN3) 0.060 4311 1919 YLR384C(IKI3) -0.058 1884 4346<br/>YIL084C(SDS3) 0.039 4965 1265 YGR200C(ELP2) -0.080 2509 3721<br/>YAL013W(DEP1) 0.064 4196 2034<br/><br/><br/>ES Random Genesets = [0.37899168945852446] ES Random KOs = [0.37899168945852446] ES Random Genesets = [0.23666376001821743] ES Random KOs = [0.23666376001821743]<br/><br/>p Random Genesets = 0.55 p Random KOs = 0.37 p Random Genesets = 0.83 p Random KOs = 0.59 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YMR263W (SAP30)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6260<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YNL097C(PHO23) 0.063 2896 3364 YPL101W(ELP4) -0.013 820 5440<br/>YNL330C(RPD3) -0.072 2521 3739 YMR312W(ELP6) 0.029 1793 4467<br/><u>YMR263W</u>(<u>SAP30</u>) -0.992 2 6258 YPL086C(ELP3) -0.048 2777 3483<br/>YOL004W(SIN3) -0.053 3305 2955 <span style='background:yellow;'>YLR384C(IKI3) -0.118 5032 1228</span><br/>YIL084C(SDS3) -0.056 3185 3075 YGR200C(ELP2) -0.020 1269 4991<br/>YAL013W(DEP1) -0.133 1000 5260<br/><br/><br/>ES Random Genesets = [0.47795527156549522] ES Random KOs = [0.47795527156549522] ES Random Genesets = [0.23425042556151029] ES Random KOs = [0.23425042556151029]<br/><br/>p Random Genesets = 0.39 p Random KOs = 0.23 p Random Genesets = 0.8 p Random KOs = 0.62 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YOL004W (SIN3)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YNL097C(PHO23) 0.031 4513 1715 YPL101W(ELP4) 0.011 656 5572<br/>YNL330C(RPD3) -0.026 4782 1446 <span style='background:yellow;'>YMR312W(ELP6) -0.120 4827 1401</span><br/>YMR263W(SAP30) -0.023 4954 1274 YPL086C(ELP3) 0.041 2241 3987<br/><u>YOL004W</u>(<u>SIN3</u>) -0.688 23 6205 YLR384C(IKI3) -0.036 2024 4204<br/>YIL084C(SDS3) -0.038 4155 2073 YGR200C(ELP2) 0.019 1108 5120<br/>YAL013W(DEP1) 0.078 2556 3672<br/><br/><br/>ES Random Genesets = [-0.4039820166987797] ES Random KOs = [-0.4039820166987797] ES Random Genesets = [-0.22495183044315992] ES Random KOs = [-0.22495183044315992]<br/><br/>p Random Genesets = 0.92 p Random KOs = 0.82 p Random Genesets = 0.82 p Random KOs = 0.67 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 32<br/>-----Knockout Gene:YOR001W (RRP6)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6260<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDR138W(HPR1) 0.133 1513 4747 YDL084W(SUB2) -0.040 1835 4425<br/>YKL214C(YRA2) 0.016 5565 695 <span style='background:yellow;'>YDR381W(YRA1) 0.159 5161 1099</span><br/>YNL139C(THO2) 0.197 723 5537 YPL169C(MEX67) 0.048 2152 4108<br/><u>YOR001W</u>(<u>RRP6</u>) -0.159 1113 5147<br/>YHR167W(THP2) -0.027 5072 1188<br/>YML062C(MFT1) 0.057 3779 2481<br/><br/><br/>ES Random Genesets = [0.45717293201265863] ES Random KOs = [0.45717293201265863] ES Random Genesets = [0.38860792561372726] ES Random KOs = [0.38860792561372726]<br/><br/>p Random Genesets = 0.39 p Random KOs = 0.19 p Random Genesets = 0.61 p Random KOs = 0.62 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 33<br/>-----Knockout Gene:YCR009C (RVS161)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL029W(ARP2) 0.064 1785 4445 YBR023C(CHS3) 0.014 1274 4956<br/>YLR370C(ARC18) 0.114 544 5686 YNL233W(BNI4) -0.001 147 6083<br/>YGR229C(SMI1) -0.006 5736 494 YBL061C(SKT5) 0.026 2275 3955<br/>YHR107C(CDC12) 0.018 4687 1543<br/>YDL225W(SHS1) -0.032 3560 2670<br/>YML115C(VAN1) 0.004 5906 324<br/>YDL223C(HBT1) 0.052 2341 3889<br/>YJL095W(BCK1) -0.018 4687 1543<br/>YHR030C(SLT2) 0.077 1313 4917<br/><u>YCR009C</u>(<u>RVS161</u>) -0.216 123 6107<br/>YDR388W(RVS167) 0.001 6183 47<br/>YDR245W(MNN10) 0.003 5990 240<br/>YNL271C(BNI1) 0.046 2679 3551<br/>YMR307W(GAS1) -0.013 5116 1114<br/>YLR342W(FKS1) -0.006 5736 494<br/>YER111C(SWI4) 0.092 892 5338<br/>YBR234C(ARC40) 0.053 2288 3942<br/>YLR337C(VRP1) 0.114 544 5686<br/>YBR260C(RGD1) 0.019 4605 1625<br/>YPL050C(MNN9) 0.014 5041 1189<br/>YNL298W(CLA4) 0.003 5990 240<br/>YLR110C(CCW12) 0.174 170 6060<br/>YBL007C(SLA1) -0.020 4522 1708<br/><br/><br/>ES Random Genesets = [0.33319756295414144] ES Random KOs = [0.33319756295414144] ES Random Genesets = [-0.6348314606741573] ES Random KOs = [-0.6348314606741573]<br/><br/>p Random Genesets = 0.7 p Random KOs = 0.54 p Random Genesets = 0.91 p Random KOs = 0.91 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YNL271C (BNI1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6279<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL029W(ARP2) 0.020 4103 2176 <span style='background:yellow;'>YBR023C(CHS3) 0.030 3246 3033</span><br/>YLR370C(ARC18) 0.039 2445 3834 YNL233W(BNI4) -0.011 1327 4952<br/>YGR229C(SMI1) -0.071 992 5287 <span style='background:yellow;'>YBL061C(SKT5) -0.052 4644 1635</span><br/>YHR107C(CDC12) -0.036 2651 3628<br/>YDL225W(SHS1) -0.010 5159 1120<br/>YML115C(VAN1) -0.045 2070 4209<br/>YDL223C(HBT1) 0.025 3592 2687<br/>YJL095W(BCK1) -0.022 3900 2379<br/>YHR030C(SLT2) 0.293 42 6237<br/>YCR009C(RVS161) -0.012 4950 1329<br/>YDR388W(RVS167) 0.103 457 5822<br/>YDR245W(MNN10) -0.003 5979 300<br/><u>YNL271C</u>(<u>BNI1</u>) -0.256 55 6224<br/>YMR307W(GAS1) 0.037 2576 3703<br/>YLR342W(FKS1) 0.014 4734 1545<br/>YER111C(SWI4) 0.036 2651 3628<br/>YBR234C(ARC40) 0.010 5159 1120<br/>YLR337C(VRP1) 0.062 1275 5004<br/>YBR260C(RGD1) 0.042 2247 4032<br/>YPL050C(MNN9) -0.067 1114 5165<br/>YNL298W(CLA4) 0.000 6279 0<br/>YLR110C(CCW12) 0.165 155 6124<br/>YBL007C(SLA1) -0.026 3485 2794<br/><br/><br/>ES Random Genesets = [0.36598020210878168] ES Random KOs = [0.36598020210878168] ES Random Genesets = [0.37298820637264246] ES Random KOs = [0.37298820637264246]<br/><br/>p Random Genesets = 0.73 p Random KOs = 0.51 p Random Genesets = 0.72 p Random KOs = 0.51 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YMR307W (GAS1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6221<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL029W(ARP2) -0.028 4785 1436 <span style='background:yellow;'>YBR023C(CHS3) 0.288 5897 324</span><br/>YLR370C(ARC18) 0.016 5379 842 <span style='background:yellow;'>YNL233W(BNI4) -0.078 3554 2667</span><br/>YGR229C(SMI1) -0.019 5207 1014 <span style='background:yellow;'>YBL061C(SKT5) 0.080 3610 2611</span><br/>YHR107C(CDC12) -0.004 6016 205<br/>YDL225W(SHS1) -0.048 3889 2332<br/>YML115C(VAN1) -0.106 1898 4323<br/>YDL223C(HBT1) 0.226 517 5704<br/>YJL095W(BCK1) -0.139 1294 4927<br/>YHR030C(SLT2) 0.640 47 6174<br/>YCR009C(RVS161) -0.009 5750 471<br/>YDR388W(RVS167) -0.017 5330 891<br/>YDR245W(MNN10) -0.084 2516 3705<br/>YNL271C(BNI1) 0.019 5207 1014<br/><u>YMR307W</u>(<u>GAS1</u>) -1.767 11 6210<br/>YLR342W(FKS1) 0.245 438 5783<br/>YER111C(SWI4) -0.168 911 5310<br/>YBR234C(ARC40) -0.060 3388 2833<br/>YLR337C(VRP1) 0.193 708 5513<br/>YBR260C(RGD1) 0.032 4608 1613<br/>YPL050C(MNN9) -0.024 4964 1257<br/>YNL298W(CLA4) 0.039 4285 1936<br/>YLR110C(CCW12) 0.149 1143 5078<br/>YBL007C(SLA1) 0.089 2371 3850<br/><br/><br/>ES Random Genesets = [0.3694296525796793] ES Random KOs = [0.3694296525796793] ES Random Genesets = [0.57129078926217658] ES Random KOs = [0.57129078926217658]<br/><br/>p Random Genesets = 0.7 p Random KOs = 0.55 p Random Genesets = 0.3 p Random KOs = 0.17 ES Pruned Random Genesets =[0.57129078926217658]p Pruned Random Genesets = 0.36 ES Pruned Random KOs =[0.57129078926217658] p Pruned Random KOs = 0.12<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YLR342W (FKS1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL029W(ARP2) 0.010 5627 601 <span style='background:yellow;'>YBR023C(CHS3) 0.169 5697 531</span><br/>YLR370C(ARC18) -0.051 3289 2939 <span style='background:yellow;'>YNL233W(BNI4) -0.072 3895 2333</span><br/>YGR229C(SMI1) -0.004 6000 228 <span style='background:yellow;'>YBL061C(SKT5) 0.103 4776 1452</span><br/>YHR107C(CDC12) 0.053 3193 3035<br/>YDL225W(SHS1) -0.019 5114 1114<br/>YML115C(VAN1) -0.090 1789 4439<br/>YDL223C(HBT1) 0.286 140 6088<br/>YJL095W(BCK1) -0.017 5220 1008<br/>YHR030C(SLT2) 0.484 26 6202<br/>YCR009C(RVS161) -0.037 4078 2150<br/>YDR388W(RVS167) 0.248 212 6016<br/>YDR245W(MNN10) -0.115 1216 5012<br/>YNL271C(BNI1) -0.029 4530 1698<br/>YMR307W(GAS1) 0.057 3011 3217<br/><u>YLR342W</u>(<u>FKS1</u>) -1.098 2 6226<br/>YER111C(SWI4) -0.108 1366 4862<br/>YBR234C(ARC40) -0.019 5114 1114<br/>YLR337C(VRP1) 0.364 68 6160<br/>YBR260C(RGD1) -0.023 4886 1342<br/>YPL050C(MNN9) -0.113 1258 4970<br/>YNL298W(CLA4) 0.086 1904 4324<br/>YLR110C(CCW12) 0.245 223 6005<br/>YBL007C(SLA1) 0.011 5587 641<br/><br/><br/>ES Random Genesets = [0.43265527105977059] ES Random KOs = [0.43265527105977059] ES Random Genesets = [0.62540141297366736] ES Random KOs = [0.62540141297366736]<br/><br/>p Random Genesets = 0.69 p Random KOs = 0.52 p Random Genesets = 0.26 p Random KOs = 0.11 ES Pruned Random Genesets =[0.62540141297366736]p Pruned Random Genesets = 0.21 ES Pruned Random KOs =[0.62540141297366736] p Pruned Random KOs = 0.1<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YER111C (SWI4)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6226<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL029W(ARP2) -0.104 2337 3889 YBR023C(CHS3) 0.010 513 5713<br/>YLR370C(ARC18) -0.059 3715 2511 YNL233W(BNI4) 0.027 1308 4918<br/>YGR229C(SMI1) 0.039 4490 1736 YBL061C(SKT5) 0.054 2333 3893<br/>YHR107C(CDC12) 0.027 4959 1267<br/>YDL225W(SHS1) -0.092 2644 3582<br/>YML115C(VAN1) 0.034 4668 1558<br/>YDL223C(HBT1) 0.273 485 5741<br/>YJL095W(BCK1) -0.038 4523 1703<br/>YHR030C(SLT2) 0.117 2057 4169<br/>YCR009C(RVS161) -0.101 2416 3810<br/>YDR388W(RVS167) 0.053 3964 2262<br/>YDR245W(MNN10) -0.159 1333 4893<br/>YNL271C(BNI1) 0.058 3762 2464<br/>YMR307W(GAS1) -0.193 946 5280<br/>YLR342W(FKS1) 0.061 3648 2578<br/><u>YER111C</u>(<u>SWI4</u>) -0.819 21 6205<br/>YBR234C(ARC40) -0.040 4450 1776<br/>YLR337C(VRP1) 0.184 1039 5187<br/>YBR260C(RGD1) -0.060 3676 2550<br/>YPL050C(MNN9) -0.065 3508 2718<br/>YNL298W(CLA4) 0.053 3964 2262<br/>YLR110C(CCW12) -0.103 2364 3862<br/>YBL007C(SLA1) 0.021 5233 993<br/><br/><br/>ES Random Genesets = [0.23275379831030396] ES Random KOs = [0.23275379831030396] ES Random Genesets = [-0.62528107934468358] ES Random KOs = [-0.62528107934468358]<br/><br/>p Random Genesets = 0.69 p Random KOs = 0.62 p Random Genesets = 0.94 p Random KOs = 0.97 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YNL298W (CLA4)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL029W(ARP2) 0.107 713 5515 <span style='background:yellow;'>YBR023C(CHS3) 0.064 4234 1994</span><br/>YLR370C(ARC18) 0.021 4661 1567 <span style='background:yellow;'>YNL233W(BNI4) -0.049 3458 2770</span><br/>YGR229C(SMI1) -0.114 588 5640 <span style='background:yellow;'>YBL061C(SKT5) -0.053 3696 2532</span><br/>YHR107C(CDC12) 0.064 2047 4181<br/>YDL225W(SHS1) -0.045 3056 3172<br/>YML115C(VAN1) 0.004 5981 247<br/>YDL223C(HBT1) 0.028 4182 2046<br/>YJL095W(BCK1) 0.081 1379 4849<br/>YHR030C(SLT2) 0.154 181 6047<br/>YCR009C(RVS161) -0.067 1886 4342<br/>YDR388W(RVS167) 0.138 295 5933<br/>YDR245W(MNN10) -0.048 2889 3339<br/>YNL271C(BNI1) 0.078 1460 4768<br/>YMR307W(GAS1) 0.067 1886 4342<br/>YLR342W(FKS1) 0.088 1178 5050<br/>YER111C(SWI4) -0.097 936 5292<br/>YBR234C(ARC40) 0.049 2836 3392<br/>YLR337C(VRP1) 0.173 118 6110<br/>YBR260C(RGD1) -0.034 3793 2435<br/>YPL050C(MNN9) -0.074 1605 4623<br/><u>YNL298W</u>(<u>CLA4</u>) -0.883 4 6224<br/>YLR110C(CCW12) 0.137 303 5925<br/>YBL007C(SLA1) 0.138 295 5933<br/><br/><br/>ES Random Genesets = [0.50547817011751928] ES Random KOs = [0.50547817011751928] ES Random Genesets = [0.55523442517662169] ES Random KOs = [0.55523442517662169]<br/><br/>p Random Genesets = 0.45 p Random KOs = 0.23 p Random Genesets = 0.3 p Random KOs = 0.18 ES Pruned Random Genesets =[0.55523442517662169]p Pruned Random Genesets = 0.34 ES Pruned Random KOs =[0.55523442517662169] p Pruned Random KOs = 0.26<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 34<br/>-----Knockout Gene:YOR026W (BUB3)-----<br/><br/>The length of the pathway opposite the knockout: 45<br/><br/>The length of the list of log10 values: 6113<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YGL086W(MAD1) -0.018 4983 1130 YLR025W(SNF7) -0.007 473 5640<br/><u>YOR026W</u>(<u>BUB3</u>) -0.602 11 6102 YPL031C(PHO85) -0.027 1718 4395<br/>YJL030W(MAD2) 0.042 3615 2498 YOL001W(PHO80) -0.026 1653 4460<br/> <span style='background:yellow;'>YDR069C(DOA4) 0.055 3193 2920</span><br/> <span style='background:yellow;'>YBR107C(IML3) 0.057 3282 2831</span><br/> YOR349W(CIN1) -0.051 3008 3105<br/> <span style='background:yellow;'>YPR135W(CTF4) -0.068 3761 2352</span><br/> YJR060W(CBF1) -0.042 2559 3554<br/> YAL011W(SWC3) 0.052 3065 3048<br/> <span style='background:yellow;'>YER016W(BIM1) -0.079 4126 1987</span><br/> YDR359C(EAF1) -0.030 1886 4227<br/> YPR141C(KAR3) -0.017 1129 4984<br/> <span style='background:yellow;'>YBR231C(SWC5) 0.158 5564 549</span><br/> YLR287C(NULL) 0.047 2812 3301<br/> <span style='background:yellow;'>YNL107W(YAF9) -0.055 3193 2920</span><br/> <span style='background:yellow;'>YLR103C(CDC45) -0.093 4550 1563</span><br/> <span style='background:yellow;'>YCL029C(BIK1) 0.089 4448 1665</span><br/> <span style='background:yellow;'>YML041C(VPS71) 0.067 3722 2391</span><br/> YLR381W(CTF3) -0.014 943 5170<br/> <span style='background:yellow;'>YNR010W(CSE2) 0.079 4126 1987</span><br/> YMR168C(CEP3) -0.031 1945 4168<br/> YKR037C(SPC34) -0.013 874 5239<br/> YER007W(PAC2) -0.036 2246 3867<br/> YNL236W(SIN4) -0.012 813 5300<br/> YML124C(TUB3) -0.025 1604 4509<br/> <span style='background:yellow;'>YPL042C(SSN3) -0.070 3819 2294</span><br/> <span style='background:yellow;'>YPL106C(SSE1) 0.119 5117 996</span><br/> <span style='background:yellow;'>YDR485C(VPS72) 0.082 4230 1883</span><br/> <span style='background:yellow;'>YMR198W(CIK1) -0.076 4016 2097</span><br/> <span style='background:yellow;'>YDR254W(CHL4) 0.059 3368 2745</span><br/> <span style='background:yellow;'>YJR135C(MCM22) -0.061 3459 2654</span><br/> YGL075C(MPS2) -0.028 1778 4335<br/> <span style='background:yellow;'>YGR113W(DAM1) -0.068 3760 2353</span><br/> <span style='background:yellow;'>YFL037W(TUB2) 0.061 3459 2654</span><br/> YOL076W(MDM20) 0.009 611 5502<br/> <span style='background:yellow;'>YCR065W(HCM1) 0.083 4263 1850</span><br/> <span style='background:yellow;'>YER009W(NTF2) -0.056 3236 2877</span><br/> YPR046W(MCM16) 0.009 611 5502<br/> <span style='background:yellow;'>YMR094W(CTF13) 0.138 5386 727</span><br/> YDR318W(MCM21) -0.037 2306 3807<br/> <span style='background:yellow;'>YPL018W(CTF19) -0.116 5062 1051</span><br/> YDL047W(SIT4) -0.001 97 6016<br/> YPL268W(PLC1) 0.033 2053 4060<br/> YDR334W(SWR1) -0.000 32 6081<br/> <span style='background:yellow;'>YMR048W(CSM3) -0.102 4781 1332</span><br/><br/><br/>ES Random Genesets = [-0.5813839358743661] ES Random KOs = [-0.5813839358743661] ES Random Genesets = [0.27243397615891907] ES Random KOs = [0.27243397615891907]<br/><br/>p Random Genesets = 0.74 p Random KOs = 0.93 p Random Genesets = 0.67 p Random KOs = 0.34 ES Pruned Random Genesets =[0.52232946180271544]p Pruned Random Genesets = 0.01 ES Pruned Random KOs =[0.52232946180271544] p Pruned Random KOs = 0.0<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YJL030W (MAD2)-----<br/><br/>The length of the pathway opposite the knockout: 45<br/><br/>The length of the list of log10 values: 6263<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YGL086W(MAD1) 0.052 1637 4626 YLR025W(SNF7) 0.020 2202 4061<br/>YOR026W(BUB3) -0.009 5326 937 <span style='background:yellow;'>YPL031C(PHO85) 0.044 4181 2082</span><br/><u>YJL030W</u>(<u>MAD2</u>) -0.247 22 6241 YOL001W(PHO80) -0.019 2106 4157<br/> YDR069C(DOA4) -0.019 2106 4157<br/> <span style='background:yellow;'>YBR107C(IML3) -0.051 4624 1639</span><br/> YOR349W(CIN1) 0.002 243 6020<br/> YPR135W(CTF4) -0.004 477 5786<br/> <span style='background:yellow;'>YJR060W(CBF1) -0.039 3852 2411</span><br/> <span style='background:yellow;'>YAL011W(SWC3) 0.055 4816 1447</span><br/> <span style='background:yellow;'>YER016W(BIM1) 0.040 3925 2338</span><br/> <span style='background:yellow;'>YDR359C(EAF1) 0.033 3380 2883</span><br/> <span style='background:yellow;'>YPR141C(KAR3) 0.047 4381 1882</span><br/> <span style='background:yellow;'>YBR231C(SWC5) 0.038 3782 2481</span><br/> <span style='background:yellow;'>YLR287C(NULL) -0.077 5605 658</span><br/> <span style='background:yellow;'>YNL107W(YAF9) 0.394 6251 12</span><br/> YLR103C(CDC45) -0.028 2983 3280<br/> YCL029C(BIK1) -0.027 2888 3375<br/> YML041C(VPS71) -0.026 2792 3471<br/> YLR381W(CTF3) -0.001 139 6124<br/> <span style='background:yellow;'>YNR010W(CSE2) 0.097 5909 354</span><br/> YMR168C(CEP3) -0.025 2701 3562<br/> <span style='background:yellow;'>YKR037C(SPC34) -0.042 4051 2212</span><br/> YER007W(PAC2) -0.008 935 5328<br/> YNL236W(SIN4) 0.002 243 6020<br/> YML124C(TUB3) 0.028 2983 3280<br/> <span style='background:yellow;'>YPL042C(SSN3) 0.056 4855 1408</span><br/> <span style='background:yellow;'>YPL106C(SSE1) 0.066 5253 1010</span><br/> <span style='background:yellow;'>YDR485C(VPS72) 0.064 5173 1090</span><br/> YMR198W(CIK1) -0.017 1891 4372<br/> <span style='background:yellow;'>YDR254W(CHL4) -0.046 4307 1956</span><br/> YJR135C(MCM22) 0.009 1066 5197<br/> YGL075C(MPS2) 0.006 716 5547<br/> <span style='background:yellow;'>YGR113W(DAM1) 0.047 4380 1883</span><br/> YFL037W(TUB2) 0.021 2303 3960<br/> YOL076W(MDM20) 0.004 477 5786<br/> <span style='background:yellow;'>YCR065W(HCM1) 0.042 4051 2212</span><br/> <span style='background:yellow;'>YER009W(NTF2) 0.032 3293 2970</span><br/> <span style='background:yellow;'>YPR046W(MCM16) -0.065 5210 1053</span><br/> <span style='background:yellow;'>YMR094W(CTF13) 0.049 4510 1753</span><br/> YDR318W(MCM21) -0.002 243 6020<br/> <span style='background:yellow;'>YPL018W(CTF19) -0.073 5475 788</span><br/> <span style='background:yellow;'>YDL047W(SIT4) 0.031 3218 3045</span><br/> <span style='background:yellow;'>YPL268W(PLC1) -0.057 4914 1349</span><br/> YDR334W(SWR1) -0.002 243 6020<br/> YMR048W(CSM3) -0.027 2888 3375<br/><br/><br/>ES Random Genesets = [0.56076545248520238] ES Random KOs = [0.56076545248520238] ES Random Genesets = [0.32289871702581519] ES Random KOs = [0.32289871702581519]<br/><br/>p Random Genesets = 0.46 p Random KOs = 0.15 p Random Genesets = 0.42 p Random KOs = 0.12 ES Pruned Random Genesets =[0.51381127255308956]p Pruned Random Genesets = 0.01 ES Pruned Random KOs =[0.51381127255308956] p Pruned Random KOs = 0.0<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YER016W (BIM1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6260<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YLR025W(SNF7) 0.053 3481 2779 <span style='background:yellow;'>YGL086W(MAD1) -0.143 5313 947</span><br/>YPL031C(PHO85) -0.023 5006 1254 YOR026W(BUB3) 0.006 377 5883<br/>YOL001W(PHO80) 0.084 2318 3942 <span style='background:yellow;'>YJL030W(MAD2) 0.064 3265 2995</span><br/>YDR069C(DOA4) 0.008 5820 440<br/>YBR107C(IML3) -0.079 2486 3774<br/>YOR349W(CIN1) 0.115 1432 4828<br/>YPR135W(CTF4) -0.109 1584 4676<br/>YJR060W(CBF1) -0.058 3271 2989<br/>YAL011W(SWC3) -0.112 1513 4747<br/><u>YER016W</u>(<u>BIM1</u>) -0.823 10 6250<br/>YDR359C(EAF1) -0.068 2878 3382<br/>YPR141C(KAR3) -0.071 2758 3502<br/>YBR231C(SWC5) -0.097 1896 4364<br/>YLR287C(NULL) -0.053 3481 2779<br/>YNL107W(YAF9) -0.129 1164 5096<br/>YLR103C(CDC45) 0.009 5747 513<br/>YCL029C(BIK1) -0.122 1287 4973<br/>YML041C(VPS71) 0.070 2805 3455<br/>YLR381W(CTF3) -0.032 4502 1758<br/>YNR010W(CSE2) 0.033 4448 1812<br/>YMR168C(CEP3) 0.005 5992 268<br/>YKR037C(SPC34) -0.070 2805 3455<br/>YER007W(PAC2) 0.060 3191 3069<br/>YNL236W(SIN4) -0.007 5881 379<br/>YML124C(TUB3) -0.111 1534 4726<br/>YPL042C(SSN3) -0.017 5305 955<br/>YPL106C(SSE1) -0.038 4195 2065<br/>YDR485C(VPS72) 0.003 6106 154<br/>YMR198W(CIK1) -0.146 917 5343<br/>YDR254W(CHL4) 0.059 3222 3038<br/>YJR135C(MCM22) -0.044 3889 2371<br/>YGL075C(MPS2) -0.124 1241 5019<br/>YGR113W(DAM1) -0.147 903 5357<br/>YFL037W(TUB2) -0.118 1374 4886<br/>YOL076W(MDM20) 0.054 3443 2817<br/>YCR065W(HCM1) -0.118 1374 4886<br/>YER009W(NTF2) -0.062 3111 3149<br/>YPR046W(MCM16) 0.074 2638 3622<br/>YMR094W(CTF13) 0.206 431 5829<br/>YDR318W(MCM21) 0.009 5747 513<br/>YPL018W(CTF19) 0.179 573 5687<br/>YDL047W(SIT4) -0.042 3974 2286<br/>YPL268W(PLC1) -0.061 3147 3113<br/>YDR334W(SWR1) -0.183 546 5714<br/>YMR048W(CSM3) 0.032 4502 1758<br/><br/><br/>ES Random Genesets = [0.32897555454309146] ES Random KOs = [0.32897555454309146] ES Random Genesets = [0.47946610938968892] ES Random KOs = [0.47946610938968892]<br/><br/>p Random Genesets = 0.79 p Random KOs = 0.6 p Random Genesets = 0.5 p Random KOs = 0.34 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YER007W (PAC2)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YLR025W(SNF7) 0.015 4454 1774 <span style='background:yellow;'>YGL086W(MAD1) 0.110 6001 227</span><br/>YPL031C(PHO85) -0.023 3573 2655 <span style='background:yellow;'>YOR026W(BUB3) -0.055 4975 1253</span><br/>YOL001W(PHO80) -0.010 5039 1189 <span style='background:yellow;'>YJL030W(MAD2) 0.041 4246 1982</span><br/>YDR069C(DOA4) 0.026 3283 2945<br/>YBR107C(IML3) -0.014 4559 1669<br/>YOR349W(CIN1) 0.014 4559 1669<br/>YPR135W(CTF4) -0.029 2978 3250<br/>YJR060W(CBF1) -0.039 2207 4021<br/>YAL011W(SWC3) -0.002 6025 203<br/>YER016W(BIM1) -0.010 5039 1189<br/>YDR359C(EAF1) -0.046 1736 4492<br/>YPR141C(KAR3) 0.075 670 5558<br/>YBR231C(SWC5) 0.009 5146 1082<br/>YLR287C(NULL) -0.068 846 5382<br/>YNL107W(YAF9) 0.039 2207 4021<br/>YLR103C(CDC45) -0.027 3185 3043<br/>YCL029C(BIK1) 0.042 1980 4248<br/>YML041C(VPS71) 0.015 4454 1774<br/>YLR381W(CTF3) -0.026 3283 2945<br/>YNR010W(CSE2) -0.040 2141 4087<br/>YMR168C(CEP3) 0.021 3795 2433<br/>YKR037C(SPC34) -0.040 2141 4087<br/><u>YER007W</u>(<u>PAC2</u>) -0.677 3 6225<br/>YNL236W(SIN4) -0.005 5638 590<br/>YML124C(TUB3) -0.004 5771 457<br/>YPL042C(SSN3) -0.028 3090 3138<br/>YPL106C(SSE1) -0.017 4239 1989<br/>YDR485C(VPS72) 0.019 4023 2205<br/>YMR198W(CIK1) -0.022 3684 2544<br/>YDR254W(CHL4) 0.082 542 5686<br/>YJR135C(MCM22) -0.048 1636 4592<br/>YGL075C(MPS2) -0.016 4338 1890<br/>YGR113W(DAM1) -0.045 1790 4438<br/>YFL037W(TUB2) -0.044 1841 4387<br/>YOL076W(MDM20) 0.141 114 6114<br/>YCR065W(HCM1) -0.062 1035 5193<br/>YER009W(NTF2) 0.024 3480 2748<br/>YPR046W(MCM16) 0.011 4915 1313<br/>YMR094W(CTF13) 0.242 20 6208<br/>YDR318W(MCM21) 0.021 3795 2433<br/>YPL018W(CTF19) 0.041 2054 4174<br/>YDL047W(SIT4) -0.004 5771 457<br/>YPL268W(PLC1) -0.001 6161 67<br/>YDR334W(SWR1) -0.008 5278 950<br/>YMR048W(CSM3) -0.059 1139 5089<br/><br/><br/>ES Random Genesets = [0.2712836676062495] ES Random KOs = [0.2712836676062495] ES Random Genesets = [0.68175979447655743] ES Random KOs = [0.68175979447655743]<br/><br/>p Random Genesets = 0.78 p Random KOs = 0.59 p Random Genesets = 0.09 p Random KOs = 0.12 ES Pruned Random Genesets =[0.68175979447655743]p Pruned Random Genesets = 0.13 ES Pruned Random KOs =[0.68175979447655743] p Pruned Random KOs = 0.06<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 35<br/>-----Knockout Gene:YMR190C (SGS1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6227<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.068 1837 4390 YMR224C(MRE11) -0.008 693 5534<br/>YJL194W(CDC6) -0.071 1724 4503 <span style='background:yellow;'>YDR369C(XRS2) -0.086 5008 1219</span><br/>YDR378C(LSM6) -0.047 2813 3414 YNL250W(RAD50) -0.023 1911 4316<br/>YOL115W(PAP2) -0.023 4407 1820<br/>YKR061W(KTR2) 0.049 2703 3524<br/>YKL139W(CTK1) -0.005 5865 362<br/>YJL006C(CTK2) -0.036 3499 2728<br/>YPR164W(MMS1) -0.033 3684 2543<br/>YJL124C(LSM1) -0.087 1217 5010<br/>YDL013W(SLX5) 0.049 2703 3524<br/><u>YMR190C</u>(<u>SGS1</u>) -0.357 28 6199<br/>YML007W(YAP1) -0.083 1340 4887<br/>YBR175W(SWD3) -0.063 2037 4190<br/>YNL297C(MON2) -0.004 5935 292<br/>YGL127C(SOH1) -0.011 5381 846<br/>YPR119W(CLB2) -0.116 621 5606<br/>YDR075W(PPH3) 0.022 4501 1726<br/>YML102W(CAC2) -0.027 4095 2132<br/>YGL003C(CDH1) -0.007 5696 531<br/>YJL092W(SRS2) -0.100 880 5347<br/>YDR386W(MUS81) 0.005 5865 362<br/>YPR018W(RLF2) -0.050 2657 3570<br/>YNL273W(TOF1) -0.028 4022 2205<br/>YAL024C(LTE1) 0.033 3685 2542<br/>YLR373C(VID22) -0.022 4501 1726<br/>YGL173C(KEM1) 0.058 2251 3976<br/>YCR066W(RAD18) 0.006 5781 446<br/>YCR077C(PAT1) -0.030 3878 2349<br/>YDR359C(EAF1) -0.017 4926 1301<br/>YLR234W(TOP3) 0.026 4167 2060<br/>YJR104C(SOD1) 0.046 2884 3343<br/>YGR180C(RNR4) 0.067 1878 4349<br/>YML028W(TSA1) -0.052 2543 3684<br/>YBR195C(MSI1) -0.028 4022 2205<br/>YLR357W(RSC2) -0.071 1724 4503<br/>YMR038C(CCS1) -0.018 4844 1383<br/>YNL147W(LSM7) -0.080 1419 4808<br/>YLR182W(SWI6) -0.048 2756 3471<br/>YML112W(CTK3) 0.017 4926 1301<br/>YDR432W(NPL3) 0.042 3116 3111<br/>YJR043C(POL32) -0.023 4407 1820<br/>YHR118C(ORC6) -0.027 4095 2132<br/>YLL033W(IRC19) 0.007 5696 531<br/>YHR154W(RTT107) -0.092 1061 5166<br/>YER116C(SLX8) 0.016 4996 1231<br/>YCL061C(MRC1) -0.022 4501 1726<br/>YKL057C(NUP120) -0.008 5610 617<br/>YLR032W(RAD5) -0.032 3760 2467<br/>YDL101C(DUN1) -0.025 4244 1983<br/>YMR048W(CSM3) 0.005 5865 362<br/><br/><br/>ES Random Genesets = [0.21107820807908095] ES Random KOs = [0.21107820807908095] ES Random Genesets = [0.46214816715739887] ES Random KOs = [0.46214816715739887]<br/><br/>p Random Genesets = 0.97 p Random KOs = 0.86 p Random Genesets = 0.5 p Random KOs = 0.39 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YML007W (YAP1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6258<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) -0.024 3767 2491 YMR224C(MRE11) 0.007 790 5468<br/>YJL194W(CDC6) -0.028 3393 2865 YDR369C(XRS2) -0.011 1212 5046<br/>YDR378C(LSM6) 0.018 4405 1853 YNL250W(RAD50) -0.029 3027 3231<br/>YOL115W(PAP2) -0.061 1353 4905<br/>YKR061W(KTR2) 0.003 6016 242<br/>YKL139W(CTK1) 0.040 2460 3798<br/>YJL006C(CTK2) -0.008 5466 792<br/>YPR164W(MMS1) 0.017 4504 1754<br/>YJL124C(LSM1) -0.044 2192 4066<br/>YDL013W(SLX5) -0.050 1857 4401<br/>YMR190C(SGS1) 0.007 5574 684<br/><u>YML007W</u>(<u>YAP1</u>) -1.462 5 6253<br/>YBR175W(SWD3) -0.002 6121 137<br/>YNL297C(MON2) -0.031 3158 3100<br/>YGL127C(SOH1) -0.112 416 5842<br/>YPR119W(CLB2) 0.047 2025 4233<br/>YDR075W(PPH3) 0.057 1515 4743<br/>YML102W(CAC2) -0.020 4186 2072<br/>YGL003C(CDH1) -0.006 5704 554<br/>YJL092W(SRS2) -0.033 2985 3273<br/>YDR386W(MUS81) -0.007 5574 684<br/>YPR018W(RLF2) 0.092 643 5615<br/>YNL273W(TOF1) 0.010 5266 992<br/>YAL024C(LTE1) 0.008 5467 791<br/>YLR373C(VID22) -0.041 2389 3869<br/>YGL173C(KEM1) 0.058 1476 4782<br/>YCR066W(RAD18) 0.016 4618 1640<br/>YCR077C(PAT1) 0.034 2900 3358<br/>YDR359C(EAF1) -0.078 884 5374<br/>YLR234W(TOP3) 0.085 761 5497<br/>YJR104C(SOD1) -0.384 51 6207<br/>YGR180C(RNR4) 0.142 277 5981<br/>YML028W(TSA1) -0.548 22 6236<br/>YBR195C(MSI1) -0.051 1801 4457<br/>YLR357W(RSC2) -0.054 1660 4598<br/>YMR038C(CCS1) -0.098 554 5704<br/>YNL147W(LSM7) 0.008 5466 792<br/>YLR182W(SWI6) -0.038 2612 3646<br/>YML112W(CTK3) -0.081 827 5431<br/>YDR432W(NPL3) -0.034 2900 3358<br/>YJR043C(POL32) 0.004 5911 347<br/>YHR118C(ORC6) -0.026 3591 2667<br/>YLL033W(IRC19) 0.005 5808 450<br/>YHR154W(RTT107) -0.045 2149 4109<br/>YER116C(SLX8) -0.012 5044 1214<br/>YCL061C(MRC1) 0.098 554 5704<br/>YKL057C(NUP120) -0.011 5163 1095<br/>YLR032W(RAD5) 0.011 5163 1095<br/>YDL101C(DUN1) -0.440 44 6214<br/>YMR048W(CSM3) -0.004 5911 347<br/><br/><br/>ES Random Genesets = [0.33916508711492821] ES Random KOs = [0.33916508711492821] ES Random Genesets = [-0.51629913710450626] ES Random KOs = [-0.51629913710450626]<br/><br/>p Random Genesets = 0.2 p Random KOs = 0.08 p Random Genesets = 0.94 p Random KOs = 0.91 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YPR119W (CLB2)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6331<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.019 4885 1446 YMR224C(MRE11) -0.023 1803 4528<br/>YJL194W(CDC6) -0.073 1837 4494 <span style='background:yellow;'>YDR369C(XRS2) -0.070 4412 1919</span><br/>YDR378C(LSM6) -0.077 1696 4635 <span style='background:yellow;'>YNL250W(RAD50) -0.053 3715 2616</span><br/>YOL115W(PAP2) -0.088 1378 4953<br/>YKR061W(KTR2) -0.018 4962 1369<br/>YKL139W(CTK1) 0.017 5035 1296<br/>YJL006C(CTK2) -0.011 5514 817<br/>YPR164W(MMS1) 0.037 3631 2700<br/>YJL124C(LSM1) -0.072 1874 4457<br/>YDL013W(SLX5) -0.016 5114 1217<br/>YMR190C(SGS1) -0.059 2396 3935<br/>YML007W(YAP1) -0.036 3690 2641<br/>YBR175W(SWD3) -0.043 3250 3081<br/>YNL297C(MON2) -0.005 5982 349<br/>YGL127C(SOH1) -0.026 4386 1945<br/><u>YPR119W</u>(<u>CLB2</u>) -0.880 4 6327<br/>YDR075W(PPH3) -0.078 1665 4666<br/>YML102W(CAC2) -0.135 566 5765<br/>YGL003C(CDH1) 0.014 5264 1067<br/>YJL092W(SRS2) -0.123 693 5638<br/>YDR386W(MUS81) -0.077 1696 4635<br/>YPR018W(RLF2) -0.290 81 6250<br/>YNL273W(TOF1) -0.101 1042 5289<br/>YAL024C(LTE1) -0.081 1578 4753<br/>YLR373C(VID22) 0.026 4386 1945<br/>YGL173C(KEM1) 0.012 5421 910<br/>YCR066W(RAD18) 0.001 6282 49<br/>YCR077C(PAT1) 0.112 835 5496<br/>YDR359C(EAF1) -0.010 5592 739<br/>YLR234W(TOP3) -0.105 953 5378<br/>YJR104C(SOD1) 0.068 2040 4291<br/>YGR180C(RNR4) 0.140 528 5803<br/>YML028W(TSA1) -0.002 6201 130<br/>YBR195C(MSI1) -0.032 3966 2365<br/>YLR357W(RSC2) -0.077 1696 4635<br/>YMR038C(CCS1) 0.087 1408 4923<br/>YNL147W(LSM7) -0.085 1465 4866<br/>YLR182W(SWI6) -0.037 3631 2700<br/>YML112W(CTK3) -0.009 5665 666<br/>YDR432W(NPL3) -0.002 6201 130<br/>YJR043C(POL32) -0.068 2040 4291<br/>YHR118C(ORC6) -0.034 3837 2494<br/>YLL033W(IRC19) -0.006 5906 425<br/>YHR154W(RTT107) -0.173 322 6009<br/>YER116C(SLX8) -0.017 5035 1296<br/>YCL061C(MRC1) -0.085 1465 4866<br/>YKL057C(NUP120) -0.063 2225 4106<br/>YLR032W(RAD5) -0.056 2526 3805<br/>YDL101C(DUN1) -0.109 879 5452<br/>YMR048W(CSM3) -0.124 679 5652<br/><br/><br/>ES Random Genesets = [0.40785003655777013] ES Random KOs = [0.40785003655777013] ES Random Genesets = [0.40522413807090324] ES Random KOs = [0.40522413807090324]<br/><br/>p Random Genesets = 0.02 p Random KOs = 0.0 p Random Genesets = 0.66 p Random KOs = 0.53 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YLR234W (TOP3)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) -0.043 1281 4947 <span style='background:yellow;'>YMR224C(MRE11) -0.024 3562 2666</span><br/>YJL194W(CDC6) -0.088 309 5919 <span style='background:yellow;'>YDR369C(XRS2) 0.039 4778 1450</span><br/>YDR378C(LSM6) -0.047 1110 5118 YNL250W(RAD50) -0.008 1386 4842<br/>YOL115W(PAP2) 0.008 4995 1233<br/>YKR061W(KTR2) 0.039 1530 4698<br/>YKL139W(CTK1) -0.019 3390 2838<br/>YJL006C(CTK2) -0.024 2772 3456<br/>YPR164W(MMS1) 0.016 3787 2441<br/>YJL124C(LSM1) 0.011 4530 1698<br/>YDL013W(SLX5) -0.008 4995 1233<br/>YMR190C(SGS1) 0.003 5820 408<br/>YML007W(YAP1) 0.038 1593 4635<br/>YBR175W(SWD3) 0.021 3136 3092<br/>YNL297C(MON2) -0.005 5480 748<br/>YGL127C(SOH1) 0.027 2470 3758<br/>YPR119W(CLB2) -0.042 1337 4891<br/>YDR075W(PPH3) 0.009 4840 1388<br/>YML102W(CAC2) 0.023 2892 3336<br/>YGL003C(CDH1) -0.002 5977 251<br/>YJL092W(SRS2) -0.082 365 5863<br/>YDR386W(MUS81) -0.007 5133 1095<br/>YPR018W(RLF2) -0.012 4390 1838<br/>YNL273W(TOF1) -0.001 6151 77<br/>YAL024C(LTE1) -0.055 834 5394<br/>YLR373C(VID22) -0.046 1149 5079<br/>YGL173C(KEM1) 0.016 3787 2441<br/>YCR066W(RAD18) -0.034 1847 4381<br/>YCR077C(PAT1) 0.065 584 5644<br/>YDR359C(EAF1) 0.011 4530 1698<br/><u>YLR234W</u>(<u>TOP3</u>) -0.004 5639 589<br/>YJR104C(SOD1) 0.055 833 5395<br/>YGR180C(RNR4) 0.103 233 5995<br/>YML028W(TSA1) 0.011 4530 1698<br/>YBR195C(MSI1) 0.004 5639 589<br/>YLR357W(RSC2) -0.006 5290 938<br/>YMR038C(CCS1) 0.076 421 5807<br/>YNL147W(LSM7) -0.012 4390 1838<br/>YLR182W(SWI6) -0.054 863 5365<br/>YML112W(CTK3) 0.044 1231 4997<br/>YDR432W(NPL3) 0.087 314 5914<br/>YJR043C(POL32) 0.008 4995 1233<br/>YHR118C(ORC6) -0.044 1231 4997<br/>YLL033W(IRC19) -0.034 1847 4381<br/>YHR154W(RTT107) -0.043 1281 4947<br/>YER116C(SLX8) 0.003 5820 408<br/>YCL061C(MRC1) -0.008 4995 1233<br/>YKL057C(NUP120) -0.035 1768 4460<br/>YLR032W(RAD5) -0.041 1395 4833<br/>YDL101C(DUN1) -0.037 1650 4578<br/>YMR048W(CSM3) 0.004 5639 589<br/><br/><br/>ES Random Genesets = [0.44016665515903114] ES Random KOs = [0.44016665515903114] ES Random Genesets = [0.42942857810758522] ES Random KOs = [0.42942857810758522]<br/><br/>p Random Genesets = 0.0 p Random KOs = 0.0 p Random Genesets = 0.56 p Random KOs = 0.47 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YJR104C (SOD1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) -0.014 5059 1169 YMR224C(MRE11) 0.013 1167 5061<br/>YJL194W(CDC6) -0.011 5319 909 YDR369C(XRS2) 0.012 1077 5151<br/>YDR378C(LSM6) 0.014 5059 1169 <span style='background:yellow;'>YNL250W(RAD50) 0.056 3992 2236</span><br/>YOL115W(PAP2) 0.073 1617 4611<br/>YKR061W(KTR2) -0.002 6091 137<br/>YKL139W(CTK1) 0.015 4965 1263<br/>YJL006C(CTK2) -0.007 5641 587<br/>YPR164W(MMS1) 0.086 1282 4946<br/>YJL124C(LSM1) -0.088 1222 5006<br/>YDL013W(SLX5) -0.011 5319 909<br/>YMR190C(SGS1) 0.049 2634 3594<br/>YML007W(YAP1) 0.147 406 5822<br/>YBR175W(SWD3) -0.014 5059 1169<br/>YNL297C(MON2) 0.001 6188 40<br/>YGL127C(SOH1) 0.006 5733 495<br/>YPR119W(CLB2) -0.163 307 5921<br/>YDR075W(PPH3) 0.053 2451 3777<br/>YML102W(CAC2) -0.003 5998 230<br/>YGL003C(CDH1) -0.048 2675 3553<br/>YJL092W(SRS2) 0.017 4812 1416<br/>YDR386W(MUS81) -0.007 5641 587<br/>YPR018W(RLF2) -0.056 2284 3944<br/>YNL273W(TOF1) -0.043 2978 3250<br/>YAL024C(LTE1) 0.034 3545 2683<br/>YLR373C(VID22) -0.065 1912 4316<br/>YGL173C(KEM1) -0.005 5827 401<br/>YCR066W(RAD18) 0.027 4029 2199<br/>YCR077C(PAT1) 0.114 757 5471<br/>YDR359C(EAF1) 0.011 5319 909<br/>YLR234W(TOP3) -0.001 6188 40<br/><u>YJR104C</u>(<u>SOD1</u>) -1.419 1 6227<br/>YGR180C(RNR4) 0.025 4176 2052<br/>YML028W(TSA1) 0.116 731 5497<br/>YBR195C(MSI1) -0.015 4965 1263<br/>YLR357W(RSC2) -0.061 2054 4174<br/>YMR038C(CCS1) -0.009 5468 760<br/>YNL147W(LSM7) -0.009 5468 760<br/>YLR182W(SWI6) -0.086 1282 4946<br/>YML112W(CTK3) 0.028 3951 2277<br/>YDR432W(NPL3) -0.070 1727 4501<br/>YJR043C(POL32) -0.038 3283 2945<br/>YHR118C(ORC6) -0.049 2634 3594<br/>YLL033W(IRC19) 0.025 4176 2052<br/>YHR154W(RTT107) -0.022 4412 1816<br/>YER116C(SLX8) 0.037 3348 2880<br/>YCL061C(MRC1) -0.090 1177 5051<br/>YKL057C(NUP120) -0.007 5641 587<br/>YLR032W(RAD5) -0.055 2338 3890<br/>YDL101C(DUN1) 0.012 5240 988<br/>YMR048W(CSM3) 0.019 4641 1587<br/><br/><br/>ES Random Genesets = [0.24117722434194289] ES Random KOs = [0.24117722434194289] ES Random Genesets = [-0.35902376364804112] ES Random KOs = [-0.35902376364804112]<br/><br/>p Random Genesets = 0.85 p Random KOs = 0.62 p Random Genesets = 0.81 p Random KOs = 0.72 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YLR182W (SWI6)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6272<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.053 3862 2410 <span style='background:yellow;'>YMR224C(MRE11) 0.116 4381 1891</span><br/>YJL194W(CDC6) 0.153 1259 5013 YDR369C(XRS2) -0.036 1721 4551<br/>YDR378C(LSM6) -0.020 5290 982 <span style='background:yellow;'>YNL250W(RAD50) -0.118 4436 1836</span><br/>YOL115W(PAP2) -0.163 1129 5143<br/>YKR061W(KTR2) 0.343 256 6016<br/>YKL139W(CTK1) -0.107 2146 4126<br/>YJL006C(CTK2) -0.048 4100 2172<br/>YPR164W(MMS1) -0.143 1413 4859<br/>YJL124C(LSM1) -0.019 5339 933<br/>YDL013W(SLX5) -0.081 2853 3419<br/>YMR190C(SGS1) -0.048 4100 2172<br/>YML007W(YAP1) 0.029 4899 1373<br/>YBR175W(SWD3) -0.139 1468 4804<br/>YNL297C(MON2) -0.034 4677 1595<br/>YGL127C(SOH1) -0.084 2757 3515<br/>YPR119W(CLB2) -0.039 4458 1814<br/>YDR075W(PPH3) -0.163 1129 5143<br/>YML102W(CAC2) 0.071 3213 3059<br/>YGL003C(CDH1) -0.047 4140 2132<br/>YJL092W(SRS2) 0.071 3213 3059<br/>YDR386W(MUS81) -0.101 2292 3980<br/>YPR018W(RLF2) 0.058 3654 2618<br/>YNL273W(TOF1) 0.019 5339 933<br/>YAL024C(LTE1) 0.030 4850 1422<br/>YLR373C(VID22) -0.026 5029 1243<br/>YGL173C(KEM1) -0.028 4936 1336<br/>YCR066W(RAD18) -0.052 3908 2364<br/>YCR077C(PAT1) 0.023 5155 1117<br/>YDR359C(EAF1) 0.221 645 5627<br/>YLR234W(TOP3) 0.395 182 6090<br/>YJR104C(SOD1) 0.148 1335 4937<br/>YGR180C(RNR4) 0.094 2473 3799<br/>YML028W(TSA1) 0.152 1276 4996<br/>YBR195C(MSI1) -0.097 2394 3878<br/>YLR357W(RSC2) -0.177 982 5290<br/>YMR038C(CCS1) -0.066 3383 2889<br/>YNL147W(LSM7) 0.002 6207 65<br/><u>YLR182W</u>(<u>SWI6</u>) -0.817 49 6223<br/>YML112W(CTK3) 0.083 2783 3489<br/>YDR432W(NPL3) -0.007 5959 313<br/>YJR043C(POL32) -0.022 5205 1067<br/>YHR118C(ORC6) -0.025 5076 1196<br/>YLL033W(IRC19) -0.108 2119 4153<br/>YHR154W(RTT107) 0.087 2662 3610<br/>YER116C(SLX8) -0.088 2627 3645<br/>YCL061C(MRC1) -0.007 5960 312<br/>YKL057C(NUP120) -0.133 1581 4691<br/>YLR032W(RAD5) 0.047 4140 2132<br/>YDL101C(DUN1) 0.169 1064 5208<br/>YMR048W(CSM3) -0.044 4270 2002<br/><br/><br/>ES Random Genesets = [0.25769292011929296] ES Random KOs = [0.25769292011929296] ES Random Genesets = [0.53518755374136751] ES Random KOs = [0.53518755374136751]<br/><br/>p Random Genesets = 0.76 p Random KOs = 0.61 p Random Genesets = 0.33 p Random KOs = 0.28 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 36<br/>-----Knockout Gene:YER007W (PAC2)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.095 359 5869 <span style='background:yellow;'>YLR200W(YKE2) -0.038 4019 2209</span><br/>YBL024W(NCL1) -0.019 4023 2205 <span style='background:yellow;'>YML094W(GIM5) 0.031 3488 2740</span><br/>YHR129C(ARP1) -0.078 608 5620 YNL153C(GIM3) -0.009 1187 5041<br/>YLL049W(LDB18) -0.001 6161 67 <span style='background:yellow;'>YGR078C(PAC10) -0.041 4246 1982</span><br/>YDR293C(SSD1) 0.064 962 5266 YEL003W(GIM4) 0.006 823 5405<br/>YCR086W(CSM1) -0.112 219 6009<br/>YAL011W(SWC3) -0.002 6025 203<br/>YBL051C(PIN4) 0.055 1300 4928<br/>YER177W(BMH1) -0.086 479 5749<br/>YKL025C(PAN3) 0.007 5403 825<br/>YLR381W(CTF3) -0.026 3283 2945<br/>YPL115C(BEM3) -0.005 5638 590<br/>YLR085C(ARP6) -0.015 4454 1774<br/>YMR299C(DYN3) 0.006 5508 720<br/><u>YER007W</u>(<u>PAC2</u>) -0.677 3 6225<br/>YBL007C(SLA1) 0.020 3906 2322<br/>YOR127W(RGA1) 0.061 1066 5162<br/>YPL253C(VIK1) 0.037 2375 3853<br/>YDR488C(PAC11) 0.014 4559 1669<br/>YPR023C(EAF3) -0.008 5278 950<br/>YLR386W(VAC14) 0.022 3684 2544<br/>YDR424C(DYN2) 0.038 2290 3938<br/>YIL095W(PRK1) 0.004 5771 457<br/>YFL037W(TUB2) -0.044 1841 4387<br/>YGR270W(YTA7) -0.027 3185 3043<br/>YBL034C(STU1) 0.002 6024 204<br/>YPR046W(MCM16) 0.011 4915 1313<br/>YPL018W(CTF19) 0.041 2054 4174<br/>YPL153C(RAD53) 0.029 2978 3250<br/>YLR337C(VRP1) 0.054 1342 4886<br/>YOR265W(RBL2) 0.047 1683 4545<br/>YPL269W(KAR9) -0.035 2508 3720<br/>YBR103W(SIF2) -0.009 5146 1082<br/>YDR334W(SWR1) -0.008 5278 950<br/>YBR108W(AIM3) -0.015 4454 1774<br/>YOR349W(CIN1) 0.014 4559 1669<br/>YPL155C(KIP2) 0.003 5894 334<br/>YBR107C(IML3) -0.014 4559 1669<br/>YPR070W(MED1) 0.059 1139 5089<br/>YBR231C(SWC5) 0.009 5146 1082<br/>YCR009C(RVS161) -0.005 5638 590<br/>YDR150W(NUM1) -0.045 1790 4438<br/>YDR388W(RVS167) -0.012 4779 1449<br/>YJL030W(MAD2) 0.041 2054 4174<br/>YNL107W(YAF9) 0.039 2207 4021<br/>YML041C(VPS71) 0.015 4454 1774<br/>YCL029C(BIK1) 0.042 1980 4248<br/>YOR269W(PAC1) -0.040 2141 4087<br/>YMR154C(RIM13) -0.018 4140 2088<br/>YDL155W(CLB3) -0.040 2141 4087<br/>YJL013C(MAD3) 0.010 5039 1189<br/>YML124C(TUB3) -0.004 5771 457<br/>YGL086W(MAD1) 0.110 232 5996<br/>YDR485C(VPS72) 0.019 4023 2205<br/>YDR254W(CHL4) 0.082 542 5686<br/>YMR109W(MYO5) 0.033 2654 3574<br/>YGR188C(BUB1) -0.028 3090 3138<br/>YJR135C(MCM22) -0.048 1636 4592<br/>YJR032W(CPR7) 0.060 1096 5132<br/>YLR447C(VMA6) 0.012 4779 1449<br/>YPL174C(NIP100) -0.058 1171 5057<br/>YNL288W(CAF40) -0.057 1210 5018<br/>YMR294W(JNM1) 0.073 716 5512<br/>YDR318W(MCM21) 0.021 3795 2433<br/>YJL020C(BBC1) -0.046 1736 4492<br/>YLL001W(DNM1) 0.056 1251 4977<br/>YOR264W(DSE3) -0.040 2141 4087<br/><br/><br/>ES Random Genesets = [0.33537551540127708] ES Random KOs = [0.33537551540127708] ES Random Genesets = [0.41400764039706767] ES Random KOs = [0.41400764039706767]<br/><br/>p Random Genesets = 0.7 p Random KOs = 0.71 p Random Genesets = 0.51 p Random KOs = 0.5 ES Pruned Random Genesets =[0.56005138086062933]p Pruned Random Genesets = 0.33 ES Pruned Random KOs =[0.56005138086062933] p Pruned Random KOs = 0.25<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YCR009C (RVS161)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.024 4192 2038 <span style='background:yellow;'>YLR200W(YKE2) -0.051 3887 2343</span><br/>YBL024W(NCL1) 0.056 2126 4104 YML094W(GIM5) -0.032 2746 3484<br/>YHR129C(ARP1) -0.067 1656 4574 <span style='background:yellow;'>YNL153C(GIM3) -0.070 4720 1510</span><br/>YLL049W(LDB18) 0.026 4028 2202 <span style='background:yellow;'>YGR078C(PAC10) -0.040 3270 2960</span><br/>YDR293C(SSD1) 0.051 2405 3825 <span style='background:yellow;'>YEL003W(GIM4) -0.059 4262 1968</span><br/>YCR086W(CSM1) -0.079 1249 4981<br/>YAL011W(SWC3) -0.021 4441 1789<br/>YBL051C(PIN4) -0.052 2341 3889<br/>YER177W(BMH1) 0.051 2405 3825<br/>YKL025C(PAN3) -0.031 3654 2576<br/>YLR381W(CTF3) 0.025 4099 2131<br/>YPL115C(BEM3) -0.013 5116 1114<br/>YLR085C(ARP6) -0.092 892 5338<br/>YMR299C(DYN3) -0.019 4605 1625<br/>YER007W(PAC2) 0.031 3654 2576<br/>YBL007C(SLA1) -0.020 4522 1708<br/>YOR127W(RGA1) 0.005 5818 412<br/>YPL253C(VIK1) 0.007 5640 590<br/>YDR488C(PAC11) -0.033 3482 2748<br/>YPR023C(EAF3) -0.032 3560 2670<br/>YLR386W(VAC14) -0.026 4028 2202<br/>YDR424C(DYN2) -0.028 3884 2346<br/>YIL095W(PRK1) 0.018 4687 1543<br/>YFL037W(TUB2) -0.031 3654 2576<br/>YGR270W(YTA7) 0.012 5201 1029<br/>YBL034C(STU1) 0.009 5464 766<br/>YPR046W(MCM16) -0.045 2733 3497<br/>YPL018W(CTF19) -0.125 433 5797<br/>YPL153C(RAD53) -0.095 838 5392<br/>YLR337C(VRP1) 0.114 544 5686<br/>YOR265W(RBL2) -0.035 3354 2876<br/>YPL269W(KAR9) 0.085 1069 5161<br/>YBR103W(SIF2) -0.096 823 5407<br/>YDR334W(SWR1) -0.031 3654 2576<br/>YBR108W(AIM3) -0.016 4866 1364<br/>YOR349W(CIN1) -0.066 1699 4531<br/>YPL155C(KIP2) -0.044 2782 3448<br/>YBR107C(IML3) 0.073 1435 4795<br/>YPR070W(MED1) 0.026 4028 2202<br/>YBR231C(SWC5) -0.100 747 5483<br/><u>YCR009C</u>(<u>RVS161</u>) -0.216 123 6107<br/>YDR150W(NUM1) 0.028 3884 2346<br/>YDR388W(RVS167) 0.001 6183 47<br/>YJL030W(MAD2) -0.009 5464 766<br/>YNL107W(YAF9) -0.008 5557 673<br/>YML041C(VPS71) 0.042 2901 3329<br/>YCL029C(BIK1) -0.049 2521 3709<br/>YOR269W(PAC1) 0.086 1045 5185<br/>YMR154C(RIM13) -0.023 4268 1962<br/>YDL155W(CLB3) -0.060 1966 4264<br/>YJL013C(MAD3) -0.044 2782 3448<br/>YML124C(TUB3) 0.008 5557 673<br/>YGL086W(MAD1) -0.029 3822 2408<br/>YDR485C(VPS72) -0.076 1345 4885<br/>YDR254W(CHL4) 0.066 1699 4531<br/>YMR109W(MYO5) 0.053 2288 3942<br/>YGR188C(BUB1) -0.023 4268 1962<br/>YJR135C(MCM22) -0.011 5286 944<br/>YJR032W(CPR7) -0.068 1619 4611<br/>YLR447C(VMA6) 0.118 506 5724<br/>YPL174C(NIP100) 0.020 4522 1708<br/>YNL288W(CAF40) -0.053 2288 3942<br/>YMR294W(JNM1) -0.107 624 5606<br/>YDR318W(MCM21) -0.044 2782 3448<br/>YJL020C(BBC1) 0.071 1508 4722<br/>YLL001W(DNM1) 0.046 2679 3551<br/>YOR264W(DSE3) -0.041 2958 3272<br/><br/><br/>ES Random Genesets = [0.24777517747004868] ES Random KOs = [0.24777517747004868] ES Random Genesets = [0.44077046548956667] ES Random KOs = [0.44077046548956667]<br/><br/>p Random Genesets = 0.75 p Random KOs = 0.79 p Random Genesets = 0.41 p Random KOs = 0.37 ES Pruned Random Genesets =[0.5248796147672552]p Pruned Random Genesets = 0.34 ES Pruned Random KOs =[0.5248796147672552] p Pruned Random KOs = 0.31<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YJL030W (MAD2)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6263<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) -0.017 4469 1794 YLR200W(YKE2) 0.005 599 5664<br/>YBL024W(NCL1) -0.007 5545 718 <span style='background:yellow;'>YML094W(GIM5) -0.043 4113 2150</span><br/>YHR129C(ARP1) 0.019 4261 2002 <span style='background:yellow;'>YNL153C(GIM3) -0.049 4510 1753</span><br/>YLL049W(LDB18) 0.001 6228 35 <span style='background:yellow;'>YGR078C(PAC10) 0.032 3293 2970</span><br/>YDR293C(SSD1) 0.023 3857 2406 YEL003W(GIM4) -0.012 1385 4878<br/>YCR086W(CSM1) 0.034 2881 3382<br/>YAL011W(SWC3) 0.055 1485 4778<br/>YBL051C(PIN4) 0.010 5195 1068<br/>YER177W(BMH1) 0.022 3958 2305<br/>YKL025C(PAN3) 0.036 2711 3552<br/>YLR381W(CTF3) -0.001 6228 35<br/>YPL115C(BEM3) -0.029 3278 2985<br/>YLR085C(ARP6) 0.023 3857 2406<br/>YMR299C(DYN3) 0.007 5545 718<br/>YER007W(PAC2) -0.008 5434 829<br/>YBL007C(SLA1) -0.029 3278 2985<br/>YOR127W(RGA1) -0.006 5662 601<br/>YPL253C(VIK1) -0.021 4059 2204<br/>YDR488C(PAC11) 0.011 5087 1176<br/>YPR023C(EAF3) 0.011 5087 1176<br/>YLR386W(VAC14) -0.037 2620 3643<br/>YDR424C(DYN2) -0.011 5087 1176<br/>YIL095W(PRK1) 0.002 6122 141<br/>YFL037W(TUB2) 0.021 4059 2204<br/>YGR270W(YTA7) 0.020 4155 2108<br/>YBL034C(STU1) -0.019 4261 2002<br/>YPR046W(MCM16) -0.065 1088 5175<br/>YPL018W(CTF19) -0.073 829 5434<br/>YPL153C(RAD53) -0.034 2881 3382<br/>YLR337C(VRP1) 0.099 342 5921<br/>YOR265W(RBL2) -0.010 5195 1068<br/>YPL269W(KAR9) -0.031 3114 3149<br/>YBR103W(SIF2) -0.037 2620 3643<br/>YDR334W(SWR1) -0.002 6122 141<br/>YBR108W(AIM3) 0.023 3857 2406<br/>YOR349W(CIN1) 0.002 6122 141<br/>YPL155C(KIP2) 0.150 81 6182<br/>YBR107C(IML3) -0.051 1701 4562<br/>YPR070W(MED1) 0.016 4584 1679<br/>YBR231C(SWC5) 0.038 2551 3712<br/>YCR009C(RVS161) -0.073 829 5434<br/>YDR150W(NUM1) 0.042 2270 3993<br/>YDR388W(RVS167) 0.059 1311 4952<br/><u>YJL030W</u>(<u>MAD2</u>) -0.247 22 6241<br/>YNL107W(YAF9) 0.394 13 6250<br/>YML041C(VPS71) -0.026 3560 2703<br/>YCL029C(BIK1) -0.027 3469 2794<br/>YOR269W(PAC1) 0.071 883 5380<br/>YMR154C(RIM13) -0.054 1539 4724<br/>YDL155W(CLB3) 0.008 5434 829<br/>YJL013C(MAD3) -0.073 829 5434<br/>YML124C(TUB3) 0.028 3373 2890<br/>YGL086W(MAD1) 0.052 1637 4626<br/>YDR485C(VPS72) 0.064 1131 5132<br/>YDR254W(CHL4) -0.046 2009 4254<br/>YMR109W(MYO5) 0.044 2148 4115<br/>YGR188C(BUB1) -0.014 4772 1491<br/>YJR135C(MCM22) 0.009 5326 937<br/>YJR032W(CPR7) -0.030 3195 3068<br/>YLR447C(VMA6) -0.033 2968 3295<br/>YPL174C(NIP100) -0.006 5662 601<br/>YNL288W(CAF40) -0.008 5434 829<br/>YMR294W(JNM1) -0.047 1954 4309<br/>YDR318W(MCM21) -0.002 6122 141<br/>YJL020C(BBC1) 0.024 3755 2508<br/>YLL001W(DNM1) 0.010 5195 1068<br/>YOR264W(DSE3) 0.010 5195 1068<br/><br/><br/>ES Random Genesets = [0.21615034005845013] ES Random KOs = [0.21615034005845013] ES Random Genesets = [0.38305255141248651] ES Random KOs = [0.38305255141248651]<br/><br/>p Random Genesets = 0.82 p Random KOs = 0.74 p Random Genesets = 0.56 p Random KOs = 0.55 ES Pruned Random Genesets =[0.52578636436212678]p Pruned Random Genesets = 0.33 ES Pruned Random KOs =[0.52578636436212678] p Pruned Random KOs = 0.38<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YMR294W (JNM1)-----<br/><br/>The length of the pathway opposite the knockout: 5<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.001 6164 66 YLR200W(YKE2) -0.015 2147 4083<br/>YBL024W(NCL1) -0.029 2684 3546 YML094W(GIM5) 0.007 1080 5150<br/>YHR129C(ARP1) 0.018 3861 2369 <span style='background:yellow;'>YNL153C(GIM3) -0.046 4861 1369</span><br/>YLL049W(LDB18) 0.031 2498 3732 <span style='background:yellow;'>YGR078C(PAC10) 0.026 3358 2872</span><br/>YDR293C(SSD1) 0.007 5283 947 YEL003W(GIM4) -0.017 2367 3863<br/>YCR086W(CSM1) -0.012 4589 1641<br/>YAL011W(SWC3) 0.036 2103 4127<br/>YBL051C(PIN4) 0.009 4963 1267<br/>YER177W(BMH1) 0.014 4319 1911<br/>YKL025C(PAN3) -0.006 5441 789<br/>YLR381W(CTF3) -0.057 959 5271<br/>YPL115C(BEM3) 0.008 5148 1082<br/>YLR085C(ARP6) 0.006 5441 789<br/>YMR299C(DYN3) -0.027 2870 3360<br/>YER007W(PAC2) -0.061 817 5413<br/>YBL007C(SLA1) 0.004 5709 521<br/>YOR127W(RGA1) 0.011 4712 1518<br/>YPL253C(VIK1) -0.029 2684 3546<br/>YDR488C(PAC11) -0.049 1280 4950<br/>YPR023C(EAF3) 0.036 2102 4128<br/>YLR386W(VAC14) -0.024 3195 3035<br/>YDR424C(DYN2) -0.015 4198 2032<br/>YIL095W(PRK1) 0.009 4963 1267<br/>YFL037W(TUB2) -0.077 457 5773<br/>YGR270W(YTA7) 0.029 2684 3546<br/>YBL034C(STU1) -0.053 1112 5118<br/>YPR046W(MCM16) -0.021 3521 2709<br/>YPL018W(CTF19) 0.038 1928 4302<br/>YPL153C(RAD53) -0.005 5577 653<br/>YLR337C(VRP1) 0.065 699 5531<br/>YOR265W(RBL2) -0.012 4589 1641<br/>YPL269W(KAR9) -0.051 1201 5029<br/>YBR103W(SIF2) 0.001 6164 66<br/>YDR334W(SWR1) -0.058 925 5305<br/>YBR108W(AIM3) -0.006 5441 789<br/>YOR349W(CIN1) 0.010 4835 1395<br/>YPL155C(KIP2) 0.022 3420 2810<br/>YBR107C(IML3) 0.033 2316 3914<br/>YPR070W(MED1) 0.012 4589 1641<br/>YBR231C(SWC5) 0.013 4465 1765<br/>YCR009C(RVS161) -0.015 4198 2032<br/>YDR150W(NUM1) 0.041 1721 4509<br/>YDR388W(RVS167) 0.010 4835 1395<br/>YJL030W(MAD2) 0.005 5577 653<br/>YNL107W(YAF9) -0.042 1645 4585<br/>YML041C(VPS71) -0.021 3521 2709<br/>YCL029C(BIK1) 0.070 576 5654<br/>YOR269W(PAC1) -0.042 1645 4585<br/>YMR154C(RIM13) 0.025 3073 3157<br/>YDL155W(CLB3) -0.034 2240 3990<br/>YJL013C(MAD3) 0.030 2590 3640<br/>YML124C(TUB3) -0.021 3521 2709<br/>YGL086W(MAD1) 0.001 6164 66<br/>YDR485C(VPS72) 0.008 5148 1082<br/>YDR254W(CHL4) 0.003 5867 363<br/>YMR109W(MYO5) -0.001 6164 66<br/>YGR188C(BUB1) -0.045 1472 4758<br/>YJR135C(MCM22) -0.029 2684 3546<br/>YJR032W(CPR7) -0.060 862 5368<br/>YLR447C(VMA6) -0.055 1029 5201<br/>YPL174C(NIP100) -0.034 2240 3990<br/>YNL288W(CAF40) -0.022 3420 2810<br/><u>YMR294W</u>(<u>JNM1</u>) -0.302 25 6205<br/>YDR318W(MCM21) -0.037 2012 4218<br/>YJL020C(BBC1) 0.036 2102 4128<br/>YLL001W(DNM1) 0.027 2870 3360<br/>YOR264W(DSE3) 0.023 3307 2923<br/><br/><br/>ES Random Genesets = [0.2808647000175446] ES Random KOs = [0.2808647000175446] ES Random Genesets = [0.26643557799495421] ES Random KOs = [0.26643557799495421]<br/><br/>p Random Genesets = 0.75 p Random KOs = 0.82 p Random Genesets = 0.76 p Random KOs = 0.84 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 37<br/>-----Knockout Gene:YHR031C (RRM3)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) -0.005 5598 630 <span style='background:yellow;'>YHR191C(CTF8) 0.038 4188 2040</span><br/><u>YHR031C</u>(<u>RRM3</u>) -0.026 3084 3144 YCL016C(DCC1) 0.019 2536 3692<br/>YBL023C(MCM2) -0.011 4767 1461 <span style='background:yellow;'>YMR078C(CTF18) 0.094 5875 353</span><br/>YGR092W(DBF2) 0.004 5747 481<br/>YDR217C(RAD9) -0.009 5043 1185<br/>YKL139W(CTK1) -0.068 815 5413<br/>YPL084W(BRO1) 0.012 4648 1580<br/>YAL021C(CCR4) -0.029 2833 3395<br/>YJR145C(RPS4A) -0.036 2249 3979<br/>YDR137W(RGP1) 0.036 2249 3979<br/>YJL006C(CTK2) -0.005 5598 630<br/>YBR278W(DPB3) -0.045 1684 4544<br/>YNL307C(MCK1) -0.010 4906 1322<br/>YLR288C(MEC3) -0.011 4767 1461<br/>YJL124C(LSM1) -0.026 3084 3144<br/>YOL012C(HTZ1) -0.046 1628 4600<br/>YJL179W(PFD1) 0.012 4648 1580<br/>YOR080W(DIA2) 0.031 2662 3566<br/>YNL250W(RAD50) 0.015 4281 1947<br/>YMR179W(SPT21) 0.058 1118 5110<br/>YMR190C(SGS1) -0.012 4648 1580<br/>YDL013W(SLX5) -0.025 3171 3057<br/>YFR027W(ECO1) -0.035 2324 3904<br/>YGL163C(RAD54) 0.089 420 5808<br/>YLR399C(BDF1) -0.118 184 6044<br/>YPL253C(VIK1) 0.037 2165 4063<br/>YNL261W(ORC5) 0.015 4281 1947<br/>YMR198W(CIK1) 0.042 1846 4382<br/>YNL297C(MON2) -0.008 5180 1048<br/>YDR004W(RAD57) -0.013 4524 1704<br/>YDR076W(RAD55) 0.026 3084 3144<br/>YNL206C(RTT106) 0.022 3466 2762<br/>YEL037C(RAD23) -0.029 2832 3396<br/>YPR119W(CLB2) 0.039 2038 4190<br/>YDR075W(PPH3) -0.014 4405 1823<br/>YJL148W(RPA34) -0.017 4045 2183<br/>YML102W(CAC2) -0.019 3819 2409<br/>YGL003C(CDH1) -0.030 2756 3472<br/>YOR368W(RAD17) 0.026 3084 3144<br/>YJL092W(SRS2) 0.055 1239 4989<br/>YGL168W(HUR1) NaN N/A N/A<br/>YDL003W(MCD1) 0.102 293 5935<br/>YPR018W(RLF2) 0.007 5325 903<br/>YNL273W(TOF1) 0.020 3690 2538<br/>YAL024C(LTE1) 0.020 3691 2537<br/>YER095W(RAD51) 0.308 18 6210<br/>YCR077C(PAT1) -0.077 606 5622<br/>YCR066W(RAD18) 0.018 3930 2298<br/>YPR120C(CLB5) 0.026 3084 3144<br/>YDR359C(EAF1) -0.071 735 5493<br/>YPR141C(KAR3) 0.013 4524 1704<br/>YMR116C(ASC1) 0.016 4162 2066<br/>YGR184C(UBR1) -0.017 4045 2183<br/>YOR198C(BFR1) -0.016 4162 2066<br/>YNL107W(YAF9) -0.039 2038 4190<br/>YLR103C(CDC45) 0.082 524 5704<br/>YML032C(RAD52) 0.028 2921 3307<br/>YGR180C(RNR4) 0.394 10 6218<br/>YNL298W(CLA4) -0.028 2921 3307<br/>YPL194W(DDC1) -0.009 5043 1185<br/>YHR200W(RPN10) -0.030 2756 3472<br/>YGL058W(RAD6) -0.012 4648 1580<br/>YLR357W(RSC2) -0.034 2408 3820<br/>YBR195C(MSI1) 0.016 4162 2066<br/>YNL199C(GCR2) -0.012 4648 1580<br/>YPL008W(CHL1) -0.008 5180 1048<br/>YDR174W(HMO1) -0.059 1069 5159<br/>YDR335W(MSN5) -0.012 4648 1580<br/>YNL084C(END3) -0.018 3930 2298<br/>YNL147W(LSM7) 0.005 5598 630<br/>YDL017W(CDC7) 0.028 2921 3307<br/>YLR182W(SWI6) 0.019 3819 2409<br/>YMR224C(MRE11) -0.050 1460 4768<br/>YLR320W(MMS22) -0.020 3690 2538<br/>YER173W(RAD24) -0.009 5043 1185<br/>YLR200W(YKE2) -0.020 3690 2538<br/>YDR225W(HTA1) -0.081 538 5690<br/>YBR060C(ORC2) -0.067 838 5390<br/>YHR154W(RTT107) 0.076 631 5597<br/>YDR369C(XRS2) 0.023 3352 2876<br/>YKL101W(HSL1) 0.085 478 5750<br/>YCL061C(MRC1) 0.049 1499 4729<br/>YDL101C(DUN1) 0.285 20 6208<br/>YLR032W(RAD5) 0.058 1118 5110<br/>YMR048W(CSM3) 0.021 3569 2659<br/><br/><br/>ES Random Genesets = [0.23226540311762273] ES Random KOs = [0.23226540311762273] ES Random Genesets = [0.47116119715284621] ES Random KOs = [0.47116119715284621]<br/><br/>p Random Genesets = 0.92 p Random KOs = 0.64 p Random Genesets = 0.52 p Random KOs = 0.21 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YOR080W (DIA2)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6216<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.064 3217 2999 YHR191C(CTF8) 0.002 137 6079<br/>YHR031C(RRM3) 0.000 6216 0 <span style='background:yellow;'>YCL016C(DCC1) -0.305 5920 296</span><br/>YBL023C(MCM2) 0.001 6189 27 YMR078C(CTF18) -0.022 1212 5004<br/>YGR092W(DBF2) 0.193 772 5444<br/>YDR217C(RAD9) 0.193 772 5444<br/>YKL139W(CTK1) -0.022 5054 1162<br/>YPL084W(BRO1) 0.001 6189 27<br/>YAL021C(CCR4) -0.003 6078 138<br/>YJR145C(RPS4A) -0.147 1231 4985<br/>YDR137W(RGP1) -0.002 6139 77<br/>YJL006C(CTK2) -0.071 2968 3248<br/>YBR278W(DPB3) -0.003 6077 139<br/>YNL307C(MCK1) -0.072 2928 3288<br/>YLR288C(MEC3) 0.037 4296 1920<br/>YJL124C(LSM1) -0.001 6189 27<br/>YOL012C(HTZ1) -0.016 5363 853<br/>YJL179W(PFD1) 0.005 5979 237<br/><u>YOR080W</u>(<u>DIA2</u>) -0.515 86 6130<br/>YNL250W(RAD50) -0.084 2545 3671<br/>YMR179W(SPT21) -0.090 2373 3843<br/>YMR190C(SGS1) -0.026 4857 1359<br/>YDL013W(SLX5) -0.014 5480 736<br/>YFR027W(ECO1) -0.044 3988 2228<br/>YGL163C(RAD54) 0.183 845 5371<br/>YLR399C(BDF1) -0.250 462 5754<br/>YPL253C(VIK1) -0.098 2144 4072<br/>YNL261W(ORC5) -0.154 1120 5096<br/>YMR198W(CIK1) -0.203 693 5523<br/>YNL297C(MON2) -0.015 5415 801<br/>YDR004W(RAD57) -0.039 4195 2021<br/>YDR076W(RAD55) 0.036 4340 1876<br/>YNL206C(RTT106) -0.118 1685 4531<br/>YEL037C(RAD23) 0.038 4236 1980<br/>YPR119W(CLB2) -0.125 1552 4664<br/>YDR075W(PPH3) 0.002 6139 77<br/>YJL148W(RPA34) -0.074 2862 3354<br/>YML102W(CAC2) 0.044 3988 2228<br/>YGL003C(CDH1) -0.033 4514 1702<br/>YOR368W(RAD17) -0.010 5700 516<br/>YJL092W(SRS2) 0.088 2427 3789<br/>YGL168W(HUR1) NaN N/A N/A<br/>YDL003W(MCD1) -0.032 4556 1660<br/>YPR018W(RLF2) -0.040 4146 2070<br/>YNL273W(TOF1) -0.084 2545 3671<br/>YAL024C(LTE1) -0.089 2403 3813<br/>YER095W(RAD51) 0.067 3105 3111<br/>YCR077C(PAT1) -0.385 172 6044<br/>YCR066W(RAD18) -0.306 295 5921<br/>YPR120C(CLB5) -0.037 4296 1920<br/>YDR359C(EAF1) 0.034 4456 1760<br/>YPR141C(KAR3) -0.075 2828 3388<br/>YMR116C(ASC1) -0.281 360 5856<br/>YGR184C(UBR1) 0.017 5305 911<br/>YOR198C(BFR1) -0.151 1167 5049<br/>YNL107W(YAF9) -0.066 3147 3069<br/>YLR103C(CDC45) 0.000 6216 0<br/>YML032C(RAD52) -0.035 4403 1813<br/>YGR180C(RNR4) 0.346 216 6000<br/>YNL298W(CLA4) 0.052 3666 2550<br/>YPL194W(DDC1) 0.034 4456 1760<br/>YHR200W(RPN10) 0.061 3345 2871<br/>YGL058W(RAD6) -0.098 2144 4072<br/>YLR357W(RSC2) -0.315 276 5940<br/>YBR195C(MSI1) -0.108 1900 4316<br/>YNL199C(GCR2) 0.012 5568 648<br/>YPL008W(CHL1) -0.008 5815 401<br/>YDR174W(HMO1) -0.154 1120 5096<br/>YDR335W(MSN5) 0.068 3074 3142<br/>YNL084C(END3) -0.102 2044 4172<br/>YNL147W(LSM7) -0.028 4751 1465<br/>YDL017W(CDC7) 0.062 3301 2915<br/>YLR182W(SWI6) -0.047 3867 2349<br/>YMR224C(MRE11) -0.060 3378 2838<br/>YLR320W(MMS22) -0.041 4110 2106<br/>YER173W(RAD24) -0.039 4195 2021<br/>YLR200W(YKE2) -0.100 2094 4122<br/>YDR225W(HTA1) -0.107 1916 4300<br/>YBR060C(ORC2) -0.023 5002 1214<br/>YHR154W(RTT107) 0.121 1618 4598<br/>YDR369C(XRS2) 0.051 3702 2514<br/>YKL101W(HSL1) 0.065 3182 3034<br/>YCL061C(MRC1) -0.363 193 6023<br/>YDL101C(DUN1) 0.132 1436 4780<br/>YLR032W(RAD5) -0.018 5252 964<br/>YMR048W(CSM3) -0.105 1961 4255<br/><br/><br/>ES Random Genesets = [0.25111189805253442] ES Random KOs = [0.25111189805253442] ES Random Genesets = [0.76679834129276969] ES Random KOs = [0.76679834129276969]<br/><br/>p Random Genesets = 0.81 p Random KOs = 0.39 p Random Genesets = 0.05 p Random KOs = 0.0 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YMR190C (SGS1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6227<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.068 1837 4390 YHR191C(CTF8) -0.003 290 5937<br/>YHR031C(RRM3) -0.015 5068 1159 YCL016C(DCC1) -0.003 290 5937<br/>YBL023C(MCM2) 0.023 4407 1820 <span style='background:yellow;'>YMR078C(CTF18) -0.076 4714 1513</span><br/>YGR092W(DBF2) 0.039 3294 2933<br/>YDR217C(RAD9) -0.031 3825 2402<br/>YKL139W(CTK1) -0.005 5865 362<br/>YPL084W(BRO1) 0.030 3878 2349<br/>YAL021C(CCR4) -0.070 1772 4455<br/>YJR145C(RPS4A) -0.017 4926 1301<br/>YDR137W(RGP1) -0.031 3825 2402<br/>YJL006C(CTK2) -0.036 3499 2728<br/>YBR278W(DPB3) -0.024 4314 1913<br/>YNL307C(MCK1) -0.121 565 5662<br/>YLR288C(MEC3) -0.033 3684 2543<br/>YJL124C(LSM1) -0.087 1217 5010<br/>YOL012C(HTZ1) -0.023 4407 1820<br/>YJL179W(PFD1) -0.010 5465 762<br/>YOR080W(DIA2) -0.003 6022 205<br/>YNL250W(RAD50) -0.023 4407 1820<br/>YMR179W(SPT21) -0.059 2204 4023<br/><u>YMR190C</u>(<u>SGS1</u>) -0.357 28 6199<br/>YDL013W(SLX5) 0.049 2703 3524<br/>YFR027W(ECO1) -0.002 6105 122<br/>YGL163C(RAD54) 0.092 1061 5166<br/>YLR399C(BDF1) -0.089 1157 5070<br/>YPL253C(VIK1) -0.056 2340 3887<br/>YNL261W(ORC5) -0.026 4167 2060<br/>YMR198W(CIK1) -0.119 587 5640<br/>YNL297C(MON2) -0.004 5935 292<br/>YDR004W(RAD57) -0.085 1282 4945<br/>YDR076W(RAD55) 0.025 4244 1983<br/>YNL206C(RTT106) -0.080 1419 4808<br/>YEL037C(RAD23) 0.068 1837 4390<br/>YPR119W(CLB2) -0.116 621 5606<br/>YDR075W(PPH3) 0.022 4501 1726<br/>YJL148W(RPA34) -0.047 2813 3414<br/>YML102W(CAC2) -0.027 4095 2132<br/>YGL003C(CDH1) -0.007 5696 531<br/>YOR368W(RAD17) -0.087 1217 5010<br/>YJL092W(SRS2) -0.100 880 5347<br/>YGL168W(HUR1) NaN N/A N/A<br/>YDL003W(MCD1) -0.171 225 6002<br/>YPR018W(RLF2) -0.050 2657 3570<br/>YNL273W(TOF1) -0.028 4022 2205<br/>YAL024C(LTE1) 0.033 3685 2542<br/>YER095W(RAD51) 0.160 273 5954<br/>YCR077C(PAT1) -0.030 3878 2349<br/>YCR066W(RAD18) 0.006 5781 446<br/>YPR120C(CLB5) -0.024 4314 1913<br/>YDR359C(EAF1) -0.017 4926 1301<br/>YPR141C(KAR3) -0.117 612 5615<br/>YMR116C(ASC1) -0.046 2884 3343<br/>YGR184C(UBR1) -0.017 4926 1301<br/>YOR198C(BFR1) -0.070 1772 4455<br/>YNL107W(YAF9) -0.061 2119 4108<br/>YLR103C(CDC45) -0.067 1878 4349<br/>YML032C(RAD52) 0.023 4407 1820<br/>YGR180C(RNR4) 0.067 1878 4349<br/>YNL298W(CLA4) 0.087 1217 5010<br/>YPL194W(DDC1) 0.133 451 5776<br/>YHR200W(RPN10) -0.000 6227 0<br/>YGL058W(RAD6) -0.056 2340 3887<br/>YLR357W(RSC2) -0.071 1724 4503<br/>YBR195C(MSI1) -0.028 4022 2205<br/>YNL199C(GCR2) -0.044 3004 3223<br/>YPL008W(CHL1) -0.040 3234 2993<br/>YDR174W(HMO1) -0.074 1614 4613<br/>YDR335W(MSN5) -0.004 5935 292<br/>YNL084C(END3) -0.061 2119 4108<br/>YNL147W(LSM7) -0.080 1419 4808<br/>YDL017W(CDC7) 0.042 3116 3111<br/>YLR182W(SWI6) -0.048 2756 3471<br/>YMR224C(MRE11) -0.008 5610 617<br/>YLR320W(MMS22) -0.114 648 5579<br/>YER173W(RAD24) -0.025 4244 1983<br/>YLR200W(YKE2) -0.024 4314 1913<br/>YDR225W(HTA1) -0.224 125 6102<br/>YBR060C(ORC2) 0.019 4753 1474<br/>YHR154W(RTT107) -0.092 1061 5166<br/>YDR369C(XRS2) -0.086 1255 4972<br/>YKL101W(HSL1) -0.077 1511 4716<br/>YCL061C(MRC1) -0.022 4501 1726<br/>YDL101C(DUN1) -0.025 4244 1983<br/>YLR032W(RAD5) -0.032 3760 2467<br/>YMR048W(CSM3) 0.005 5865 362<br/><br/><br/>ES Random Genesets = [0.27359484247602506] ES Random KOs = [0.27359484247602506] ES Random Genesets = [0.64746786496938125] ES Random KOs = [0.64746786496938125]<br/><br/>p Random Genesets = 0.62 p Random KOs = 0.26 p Random Genesets = 0.18 p Random KOs = 0.03 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YDR004W (RAD57)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.091 1149 5079 YHR191C(CTF8) -0.035 2696 3532<br/>YHR031C(RRM3) -0.095 1051 5177 YCL016C(DCC1) -0.025 1992 4236<br/>YBL023C(MCM2) 0.000 6228 0 <span style='background:yellow;'>YMR078C(CTF18) -0.048 3440 2788</span><br/>YGR092W(DBF2) 0.073 1706 4522<br/>YDR217C(RAD9) -0.061 2186 4042<br/>YKL139W(CTK1) -0.036 3530 2698<br/>YPL084W(BRO1) -0.019 4754 1474<br/>YAL021C(CCR4) -0.005 5834 394<br/>YJR145C(RPS4A) -0.104 868 5360<br/>YDR137W(RGP1) 0.032 3800 2428<br/>YJL006C(CTK2) -0.038 3419 2809<br/>YBR278W(DPB3) 0.004 5912 316<br/>YNL307C(MCK1) -0.096 1032 5196<br/>YLR288C(MEC3) -0.019 4754 1474<br/>YJL124C(LSM1) -0.113 728 5500<br/>YOL012C(HTZ1) -0.044 3059 3169<br/>YJL179W(PFD1) 0.006 5750 478<br/>YOR080W(DIA2) -0.030 3947 2281<br/>YNL250W(RAD50) 0.008 5598 630<br/>YMR179W(SPT21) 0.007 5669 559<br/>YMR190C(SGS1) -0.057 2360 3868<br/>YDL013W(SLX5) -0.016 4994 1234<br/>YFR027W(ECO1) -0.059 2272 3956<br/>YGL163C(RAD54) 0.107 823 5405<br/>YLR399C(BDF1) 0.001 6190 38<br/>YPL253C(VIK1) 0.004 5912 316<br/>YNL261W(ORC5) 0.024 4387 1841<br/>YMR198W(CIK1) -0.035 3600 2628<br/>YNL297C(MON2) -0.023 4465 1763<br/><u>YDR004W</u>(<u>RAD57</u>) -0.548 7 6221<br/>YDR076W(RAD55) 0.044 3059 3169<br/>YNL206C(RTT106) -0.054 2488 3740<br/>YEL037C(RAD23) 0.027 4159 2069<br/>YPR119W(CLB2) -0.059 2272 3956<br/>YDR075W(PPH3) -0.090 1184 5044<br/>YJL148W(RPA34) -0.066 1990 4238<br/>YML102W(CAC2) -0.051 2671 3557<br/>YGL003C(CDH1) 0.019 4754 1474<br/>YOR368W(RAD17) -0.049 2786 3442<br/>YJL092W(SRS2) 0.019 4754 1474<br/>YGL168W(HUR1) NaN N/A N/A<br/>YDL003W(MCD1) -0.116 690 5538<br/>YPR018W(RLF2) -0.111 755 5473<br/>YNL273W(TOF1) 0.038 3419 2809<br/>YAL024C(LTE1) -0.091 1150 5078<br/>YER095W(RAD51) 0.279 84 6144<br/>YCR077C(PAT1) -0.034 3666 2562<br/>YCR066W(RAD18) -0.002 6100 128<br/>YPR120C(CLB5) -0.022 4541 1687<br/>YDR359C(EAF1) 0.003 6017 211<br/>YPR141C(KAR3) -0.066 1990 4238<br/>YMR116C(ASC1) -0.004 5912 316<br/>YGR184C(UBR1) -0.022 4541 1687<br/>YOR198C(BFR1) -0.045 3009 3219<br/>YNL107W(YAF9) -0.059 2272 3956<br/>YLR103C(CDC45) 0.013 5230 998<br/>YML032C(RAD52) -0.039 3349 2879<br/>YGR180C(RNR4) 0.164 294 5934<br/>YNL298W(CLA4) 0.060 2233 3995<br/>YPL194W(DDC1) 0.071 1777 4451<br/>YHR200W(RPN10) 0.020 4691 1537<br/>YGL058W(RAD6) -0.092 1114 5114<br/>YLR357W(RSC2) -0.081 1444 4784<br/>YBR195C(MSI1) -0.040 3287 2941<br/>YNL199C(GCR2) -0.023 4465 1763<br/>YPL008W(CHL1) -0.013 5230 998<br/>YDR174W(HMO1) -0.014 5149 1079<br/>YDR335W(MSN5) -0.029 4035 2193<br/>YNL084C(END3) -0.038 3419 2809<br/>YNL147W(LSM7) -0.062 2145 4083<br/>YDL017W(CDC7) 0.020 4691 1537<br/>YLR182W(SWI6) -0.058 2315 3913<br/>YMR224C(MRE11) -0.088 1234 4994<br/>YLR320W(MMS22) -0.045 3009 3219<br/>YER173W(RAD24) -0.036 3530 2698<br/>YLR200W(YKE2) -0.108 805 5423<br/>YDR225W(HTA1) -0.153 354 5874<br/>YBR060C(ORC2) -0.034 3666 2562<br/>YHR154W(RTT107) -0.020 4691 1537<br/>YDR369C(XRS2) 0.030 3947 2281<br/>YKL101W(HSL1) -0.030 3947 2281<br/>YCL061C(MRC1) 0.015 5083 1145<br/>YDL101C(DUN1) 0.040 3287 2941<br/>YLR032W(RAD5) -0.091 1149 5079<br/>YMR048W(CSM3) -0.018 4841 1387<br/><br/><br/>ES Random Genesets = [0.23689668700316713] ES Random KOs = [0.23689668700316713] ES Random Genesets = [-0.4476557482337829] ES Random KOs = [-0.4476557482337829]<br/><br/>p Random Genesets = 0.85 p Random KOs = 0.73 p Random Genesets = 0.82 p Random KOs = 0.65 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YPR119W (CLB2)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6331<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.019 4885 1446 YHR191C(CTF8) -0.001 128 6203<br/>YHR031C(RRM3) -0.010 5592 739 <span style='background:yellow;'>YCL016C(DCC1) -0.072 4492 1839</span><br/>YBL023C(MCM2) -0.007 5813 518 <span style='background:yellow;'>YMR078C(CTF18) -0.155 5916 415</span><br/>YGR092W(DBF2) 0.045 3130 3201<br/>YDR217C(RAD9) -0.021 4737 1594<br/>YKL139W(CTK1) 0.017 5035 1296<br/>YPL084W(BRO1) 0.032 3966 2365<br/>YAL021C(CCR4) 0.017 5035 1296<br/>YJR145C(RPS4A) -0.007 5813 518<br/>YDR137W(RGP1) 0.033 3900 2431<br/>YJL006C(CTK2) -0.011 5514 817<br/>YBR278W(DPB3) 0.019 4885 1446<br/>YNL307C(MCK1) -0.143 503 5828<br/>YLR288C(MEC3) -0.084 1489 4842<br/>YJL124C(LSM1) -0.072 1874 4457<br/>YOL012C(HTZ1) -0.035 3758 2573<br/>YJL179W(PFD1) 0.000 6331 0<br/>YOR080W(DIA2) 0.030 4120 2211<br/>YNL250W(RAD50) -0.053 2664 3667<br/>YMR179W(SPT21) -0.077 1696 4635<br/>YMR190C(SGS1) -0.059 2396 3935<br/>YDL013W(SLX5) -0.016 5114 1217<br/>YFR027W(ECO1) -0.201 219 6112<br/>YGL163C(RAD54) -0.058 2438 3893<br/>YLR399C(BDF1) -0.032 3966 2365<br/>YPL253C(VIK1) -0.027 4319 2012<br/>YNL261W(ORC5) -0.006 5906 425<br/>YMR198W(CIK1) -0.018 4962 1369<br/>YNL297C(MON2) -0.005 5982 349<br/>YDR004W(RAD57) -0.023 4605 1726<br/>YDR076W(RAD55) 0.093 1244 5087<br/>YNL206C(RTT106) -0.113 815 5516<br/>YEL037C(RAD23) -0.051 2777 3554<br/><u>YPR119W</u>(<u>CLB2</u>) -0.880 4 6327<br/>YDR075W(PPH3) -0.078 1665 4666<br/>YJL148W(RPA34) 0.011 5514 817<br/>YML102W(CAC2) -0.135 566 5765<br/>YGL003C(CDH1) 0.014 5264 1067<br/>YOR368W(RAD17) -0.115 791 5540<br/>YJL092W(SRS2) -0.123 693 5638<br/>YGL168W(HUR1) -0.014 5264 1067<br/>YDL003W(MCD1) -0.230 153 6178<br/>YPR018W(RLF2) -0.290 81 6250<br/>YNL273W(TOF1) -0.101 1042 5289<br/>YAL024C(LTE1) -0.081 1578 4753<br/>YER095W(RAD51) -0.098 1121 5210<br/>YCR077C(PAT1) 0.112 835 5496<br/>YCR066W(RAD18) 0.001 6282 49<br/>YPR120C(CLB5) -0.041 3383 2948<br/>YDR359C(EAF1) -0.010 5592 739<br/>YPR141C(KAR3) -0.080 1611 4720<br/>YMR116C(ASC1) -0.125 667 5664<br/>YGR184C(UBR1) -0.019 4885 1446<br/>YOR198C(BFR1) -0.109 879 5452<br/>YNL107W(YAF9) -0.039 3502 2829<br/>YLR103C(CDC45) -0.240 139 6192<br/>YML032C(RAD52) -0.006 5906 425<br/>YGR180C(RNR4) 0.140 528 5803<br/>YNL298W(CLA4) 0.068 2040 4291<br/>YPL194W(DDC1) 0.171 330 6001<br/>YHR200W(RPN10) -0.053 2664 3667<br/>YGL058W(RAD6) -0.106 933 5398<br/>YLR357W(RSC2) -0.077 1696 4635<br/>YBR195C(MSI1) -0.032 3966 2365<br/>YNL199C(GCR2) -0.022 4670 1661<br/>YPL008W(CHL1) -0.068 2040 4291<br/>YDR174W(HMO1) 0.013 5352 979<br/>YDR335W(MSN5) -0.081 1577 4754<br/>YNL084C(END3) -0.081 1577 4754<br/>YNL147W(LSM7) -0.085 1465 4866<br/>YDL017W(CDC7) -0.028 4253 2078<br/>YLR182W(SWI6) -0.037 3631 2700<br/>YMR224C(MRE11) -0.023 4605 1726<br/>YLR320W(MMS22) -0.068 2040 4291<br/>YER173W(RAD24) -0.034 3837 2494<br/>YLR200W(YKE2) -0.073 1837 4494<br/>YDR225W(HTA1) -0.216 177 6154<br/>YBR060C(ORC2) 0.024 4526 1805<br/>YHR154W(RTT107) -0.173 322 6009<br/>YDR369C(XRS2) -0.070 1948 4383<br/>YKL101W(HSL1) -0.154 423 5908<br/>YCL061C(MRC1) -0.085 1465 4866<br/>YDL101C(DUN1) -0.109 879 5452<br/>YLR032W(RAD5) -0.056 2526 3805<br/>YMR048W(CSM3) -0.124 679 5652<br/><br/><br/>ES Random Genesets = [0.39467959679939019] ES Random KOs = [0.39467959679939019] ES Random Genesets = [0.69737573859785529] ES Random KOs = [0.69737573859785529]<br/><br/>p Random Genesets = 0.0 p Random KOs = 0.0 p Random Genesets = 0.07 p Random KOs = 0.05 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YGR184C (UBR1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.068 1079 5149 YHR191C(CTF8) -0.001 176 6052<br/>YHR031C(RRM3) -0.067 1098 5130 <span style='background:yellow;'>YCL016C(DCC1) -0.054 4739 1489</span><br/>YBL023C(MCM2) -0.034 2723 3505 YMR078C(CTF18) -0.002 308 5920<br/>YGR092W(DBF2) 0.034 2723 3505<br/>YDR217C(RAD9) 0.008 5293 935<br/>YKL139W(CTK1) -0.036 2554 3674<br/>YPL084W(BRO1) 0.035 2640 3588<br/>YAL021C(CCR4) 0.018 4176 2052<br/>YJR145C(RPS4A) 0.013 4708 1520<br/>YDR137W(RGP1) -0.009 5172 1056<br/>YJL006C(CTK2) 0.015 4472 1756<br/>YBR278W(DPB3) -0.014 4599 1629<br/>YNL307C(MCK1) 0.019 4061 2167<br/>YLR288C(MEC3) -0.020 3957 2271<br/>YJL124C(LSM1) -0.021 3855 2373<br/>YOL012C(HTZ1) -0.060 1308 4920<br/>YJL179W(PFD1) -0.011 4940 1288<br/>YOR080W(DIA2) 0.015 4472 1756<br/>YNL250W(RAD50) 0.069 1051 5177<br/>YMR179W(SPT21) -0.047 1830 4398<br/>YMR190C(SGS1) -0.007 5417 811<br/>YDL013W(SLX5) -0.033 2810 3418<br/>YFR027W(ECO1) -0.036 2554 3674<br/>YGL163C(RAD54) -0.033 2810 3418<br/>YLR399C(BDF1) 0.024 3567 2661<br/>YPL253C(VIK1) -0.021 3855 2373<br/>YNL261W(ORC5) -0.037 2471 3757<br/>YMR198W(CIK1) -0.061 1282 4946<br/>YNL297C(MON2) -0.006 5541 687<br/>YDR004W(RAD57) 0.052 1606 4622<br/>YDR076W(RAD55) 0.000 6228 0<br/>YNL206C(RTT106) -0.016 4367 1861<br/>YEL037C(RAD23) 0.022 3740 2488<br/>YPR119W(CLB2) -0.031 2947 3281<br/>YDR075W(PPH3) 0.011 4940 1288<br/>YJL148W(RPA34) 0.042 2115 4113<br/>YML102W(CAC2) -0.089 682 5546<br/>YGL003C(CDH1) 0.004 5785 443<br/>YOR368W(RAD17) -0.038 2394 3834<br/>YJL092W(SRS2) -0.129 349 5879<br/>YGL168W(HUR1) NaN N/A N/A<br/>YDL003W(MCD1) -0.087 710 5518<br/>YPR018W(RLF2) 0.024 3567 2661<br/>YNL273W(TOF1) -0.050 1690 4538<br/>YAL024C(LTE1) -0.040 2249 3979<br/>YER095W(RAD51) -0.014 4599 1629<br/>YCR077C(PAT1) -0.059 1348 4880<br/>YCR066W(RAD18) -0.016 4367 1861<br/>YPR120C(CLB5) -0.016 4367 1861<br/>YDR359C(EAF1) -0.020 3957 2271<br/>YPR141C(KAR3) -0.002 6050 178<br/>YMR116C(ASC1) -0.015 4472 1756<br/><u>YGR184C</u>(<u>UBR1</u>) -0.347 41 6187<br/>YOR198C(BFR1) -0.024 3567 2661<br/>YNL107W(YAF9) -0.005 5654 574<br/>YLR103C(CDC45) -0.045 1949 4279<br/>YML032C(RAD52) -0.001 6171 57<br/>YGR180C(RNR4) 0.080 832 5396<br/>YNL298W(CLA4) 0.011 4940 1288<br/>YPL194W(DDC1) 0.028 3204 3024<br/>YHR200W(RPN10) -0.071 1003 5225<br/>YGL058W(RAD6) 0.008 5293 935<br/>YLR357W(RSC2) -0.026 3389 2839<br/>YBR195C(MSI1) -0.039 2322 3906<br/>YNL199C(GCR2) 0.004 5785 443<br/>YPL008W(CHL1) -0.041 2193 4035<br/>YDR174W(HMO1) 0.037 2471 3757<br/>YDR335W(MSN5) -0.004 5785 443<br/>YNL084C(END3) -0.054 1525 4703<br/>YNL147W(LSM7) -0.069 1051 5177<br/>YDL017W(CDC7) -0.044 2012 4216<br/>YLR182W(SWI6) -0.020 3957 2271<br/>YMR224C(MRE11) -0.010 5062 1166<br/>YLR320W(MMS22) -0.006 5541 687<br/>YER173W(RAD24) -0.028 3204 3024<br/>YLR200W(YKE2) -0.003 5918 310<br/>YDR225W(HTA1) -0.048 1782 4446<br/>YBR060C(ORC2) -0.013 4708 1520<br/>YHR154W(RTT107) -0.059 1348 4880<br/>YDR369C(XRS2) -0.016 4367 1861<br/>YKL101W(HSL1) -0.037 2471 3757<br/>YCL061C(MRC1) -0.018 4175 2053<br/>YDL101C(DUN1) -0.067 1098 5130<br/>YLR032W(RAD5) -0.017 4268 1960<br/>YMR048W(CSM3) -0.012 4831 1397<br/><br/><br/>ES Random Genesets = [0.23051648654672086] ES Random KOs = [0.23051648654672086] ES Random Genesets = [0.66825138329539169] ES Random KOs = [0.66825138329539169]<br/><br/>p Random Genesets = 0.9 p Random KOs = 0.63 p Random Genesets = 0.13 p Random KOs = 0.02 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YNL298W (CLA4)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.107 714 5514 YHR191C(CTF8) 0.044 3170 3058<br/>YHR031C(RRM3) -0.030 4045 2183 YCL016C(DCC1) 0.011 859 5369<br/>YBL023C(MCM2) -0.039 3433 2795 <span style='background:yellow;'>YMR078C(CTF18) -0.070 4510 1718</span><br/>YGR092W(DBF2) 0.024 4453 1775<br/>YDR217C(RAD9) -0.036 3646 2582<br/>YKL139W(CTK1) -0.005 5907 321<br/>YPL084W(BRO1) 0.029 4116 2112<br/>YAL021C(CCR4) 0.110 660 5568<br/>YJR145C(RPS4A) 0.046 3001 3227<br/>YDR137W(RGP1) -0.073 1639 4589<br/>YJL006C(CTK2) -0.053 2573 3655<br/>YBR278W(DPB3) 0.078 1460 4768<br/>YNL307C(MCK1) -0.048 2889 3339<br/>YLR288C(MEC3) -0.064 2047 4181<br/>YJL124C(LSM1) 0.021 4661 1567<br/>YOL012C(HTZ1) -0.040 3376 2852<br/>YJL179W(PFD1) -0.028 4182 2046<br/>YOR080W(DIA2) -0.034 3793 2435<br/>YNL250W(RAD50) -0.121 482 5746<br/>YMR179W(SPT21) 0.024 4453 1775<br/>YMR190C(SGS1) 0.058 2318 3910<br/>YDL013W(SLX5) 0.035 3710 2518<br/>YFR027W(ECO1) 0.017 4949 1279<br/>YGL163C(RAD54) 0.054 2530 3698<br/>YLR399C(BDF1) -0.025 4384 1844<br/>YPL253C(VIK1) -0.071 1716 4512<br/>YNL261W(ORC5) -0.028 4182 2046<br/>YMR198W(CIK1) -0.070 1759 4469<br/>YNL297C(MON2) -0.065 1992 4236<br/>YDR004W(RAD57) -0.027 4250 1978<br/>YDR076W(RAD55) -0.066 1943 4285<br/>YNL206C(RTT106) -0.057 2376 3852<br/>YEL037C(RAD23) 0.091 1074 5154<br/>YPR119W(CLB2) -0.129 370 5858<br/>YDR075W(PPH3) -0.178 104 6124<br/>YJL148W(RPA34) -0.101 839 5389<br/>YML102W(CAC2) 0.128 387 5841<br/>YGL003C(CDH1) -0.011 5434 794<br/>YOR368W(RAD17) -0.107 713 5515<br/>YJL092W(SRS2) 0.013 5274 954<br/>YGL168W(HUR1) NaN N/A N/A<br/>YDL003W(MCD1) -0.012 5367 861<br/>YPR018W(RLF2) -0.091 1074 5154<br/>YNL273W(TOF1) -0.011 5434 794<br/>YAL024C(LTE1) 0.013 5275 953<br/>YER095W(RAD51) 0.069 1797 4431<br/>YCR077C(PAT1) 0.097 936 5292<br/>YCR066W(RAD18) 0.002 6113 115<br/>YPR120C(CLB5) 0.019 4809 1419<br/>YDR359C(EAF1) 0.084 1280 4948<br/>YPR141C(KAR3) -0.072 1679 4549<br/>YMR116C(ASC1) -0.001 6190 38<br/>YGR184C(UBR1) 0.015 5124 1104<br/>YOR198C(BFR1) -0.068 1840 4388<br/>YNL107W(YAF9) -0.015 5124 1104<br/>YLR103C(CDC45) -0.052 2634 3594<br/>YML032C(RAD52) 0.053 2573 3655<br/>YGR180C(RNR4) 0.040 3376 2852<br/><u>YNL298W</u>(<u>CLA4</u>) -0.883 4 6224<br/>YPL194W(DDC1) 0.063 2090 4138<br/>YHR200W(RPN10) 0.095 988 5240<br/>YGL058W(RAD6) -0.037 3572 2656<br/>YLR357W(RSC2) -0.064 2047 4181<br/>YBR195C(MSI1) -0.027 4250 1978<br/>YNL199C(GCR2) -0.002 6113 115<br/>YPL008W(CHL1) 0.006 5834 394<br/>YDR174W(HMO1) 0.046 3001 3227<br/>YDR335W(MSN5) 0.007 5741 487<br/>YNL084C(END3) -0.034 3793 2435<br/>YNL147W(LSM7) -0.061 2175 4053<br/>YDL017W(CDC7) 0.047 2948 3280<br/>YLR182W(SWI6) -0.022 4583 1645<br/>YMR224C(MRE11) 0.047 2948 3280<br/>YLR320W(MMS22) 0.016 5035 1193<br/>YER173W(RAD24) 0.005 5907 321<br/>YLR200W(YKE2) -0.044 3119 3109<br/>YDR225W(HTA1) -0.054 2530 3698<br/>YBR060C(ORC2) 0.017 4949 1279<br/>YHR154W(RTT107) -0.045 3056 3172<br/>YDR369C(XRS2) -0.058 2318 3910<br/>YKL101W(HSL1) 0.137 303 5925<br/>YCL061C(MRC1) -0.029 4116 2112<br/>YDL101C(DUN1) -0.042 3235 2993<br/>YLR032W(RAD5) -0.003 6047 181<br/>YMR048W(CSM3) 0.060 2229 3999<br/><br/><br/>ES Random Genesets = [0.26006806636059121] ES Random KOs = [0.26006806636059121] ES Random Genesets = [0.40839439097787233] ES Random KOs = [0.40839439097787233]<br/><br/>p Random Genesets = 0.68 p Random KOs = 0.25 p Random Genesets = 0.59 p Random KOs = 0.41 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YGL058W (RAD6)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6274<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.060 3806 2468 YHR191C(CTF8) -0.036 1565 4709<br/>YHR031C(RRM3) 0.032 4935 1339 <span style='background:yellow;'>YCL016C(DCC1) -0.170 5210 1064</span><br/>YBL023C(MCM2) -0.137 1582 4692 <span style='background:yellow;'>YMR078C(CTF18) -0.199 5518 756</span><br/>YGR092W(DBF2) 0.102 2388 3886<br/>YDR217C(RAD9) 0.015 5619 655<br/>YKL139W(CTK1) -0.131 1690 4584<br/>YPL084W(BRO1) -0.040 4588 1686<br/>YAL021C(CCR4) -0.135 1620 4654<br/>YJR145C(RPS4A) -0.015 5619 655<br/>YDR137W(RGP1) -0.110 2206 4068<br/>YJL006C(CTK2) 0.083 2992 3282<br/>YBR278W(DPB3) 0.010 5851 423<br/>YNL307C(MCK1) -0.056 3949 2325<br/>YLR288C(MEC3) -0.043 4459 1815<br/>YJL124C(LSM1) -0.077 3190 3084<br/>YOL012C(HTZ1) -0.041 4537 1737<br/>YJL179W(PFD1) -0.104 2343 3931<br/>YOR080W(DIA2) -0.077 3190 3084<br/>YNL250W(RAD50) -0.076 3223 3051<br/>YMR179W(SPT21) -0.005 6076 198<br/>YMR190C(SGS1) 0.149 1388 4886<br/>YDL013W(SLX5) -0.053 4052 2222<br/>YFR027W(ECO1) 0.112 2142 4132<br/>YGL163C(RAD54) 0.122 1900 4374<br/>YLR399C(BDF1) -0.241 471 5803<br/>YPL253C(VIK1) -0.150 1371 4903<br/>YNL261W(ORC5) -0.210 672 5602<br/>YMR198W(CIK1) 0.000 6274 0<br/>YNL297C(MON2) 0.036 4763 1511<br/>YDR004W(RAD57) -0.085 2930 3344<br/>YDR076W(RAD55) 0.157 1258 5016<br/>YNL206C(RTT106) -0.043 4459 1815<br/>YEL037C(RAD23) 0.097 2543 3731<br/>YPR119W(CLB2) 0.010 5851 423<br/>YDR075W(PPH3) -0.073 3317 2957<br/>YJL148W(RPA34) 0.003 6150 124<br/>YML102W(CAC2) 0.011 5792 482<br/>YGL003C(CDH1) 0.073 3317 2957<br/>YOR368W(RAD17) -0.195 787 5487<br/>YJL092W(SRS2) 0.068 3489 2785<br/>YGL168W(HUR1) 0.083 2992 3282<br/>YDL003W(MCD1) -0.215 633 5641<br/>YPR018W(RLF2) -0.035 4805 1469<br/>YNL273W(TOF1) -0.006 6031 243<br/>YAL024C(LTE1) 0.083 2992 3282<br/>YER095W(RAD51) 0.227 552 5722<br/>YCR077C(PAT1) -0.042 4492 1782<br/>YCR066W(RAD18) -0.000 6274 0<br/>YPR120C(CLB5) 0.044 4422 1852<br/>YDR359C(EAF1) -0.421 98 6176<br/>YPR141C(KAR3) -0.012 5754 520<br/>YMR116C(ASC1) -0.100 2452 3822<br/>YGR184C(UBR1) 0.223 573 5701<br/>YOR198C(BFR1) 0.104 2343 3931<br/>YNL107W(YAF9) 0.069 3458 2816<br/>YLR103C(CDC45) -0.059 3838 2436<br/>YML032C(RAD52) 0.091 2733 3541<br/>YGR180C(RNR4) 0.189 849 5425<br/>YNL298W(CLA4) -0.046 4334 1940<br/>YPL194W(DDC1) -0.020 5419 855<br/>YHR200W(RPN10) 0.050 4166 2108<br/><u>YGL058W</u>(<u>RAD6</u>) -0.602 45 6229<br/>YLR357W(RSC2) -0.029 5061 1213<br/>YBR195C(MSI1) -0.192 821 5453<br/>YNL199C(GCR2) -0.138 1566 4708<br/>YPL008W(CHL1) -0.147 1412 4862<br/>YDR174W(HMO1) -0.106 2294 3980<br/>YDR335W(MSN5) 0.001 6246 28<br/>YNL084C(END3) 0.050 4166 2108<br/>YNL147W(LSM7) -0.006 6031 243<br/>YDL017W(CDC7) -0.052 4099 2175<br/>YLR182W(SWI6) 0.038 4668 1606<br/>YMR224C(MRE11) -0.402 108 6166<br/>YLR320W(MMS22) 0.060 3806 2468<br/>YER173W(RAD24) 0.061 3758 2516<br/>YLR200W(YKE2) -0.110 2206 4068<br/>YDR225W(HTA1) -0.260 386 5888<br/>YBR060C(ORC2) -0.190 838 5436<br/>YHR154W(RTT107) -0.040 4588 1686<br/>YDR369C(XRS2) 0.034 4854 1420<br/>YKL101W(HSL1) -0.093 2675 3599<br/>YCL061C(MRC1) -0.000 6274 0<br/>YDL101C(DUN1) 0.210 672 5602<br/>YLR032W(RAD5) -0.037 4707 1567<br/>YMR048W(CSM3) -0.006 6031 243<br/><br/><br/>ES Random Genesets = [0.24158152664530808] ES Random KOs = [0.24158152664530808] ES Random Genesets = [0.70310299671906906] ES Random KOs = [0.70310299671906906]<br/><br/>p Random Genesets = 0.84 p Random KOs = 0.46 p Random Genesets = 0.08 p Random KOs = 0.01 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YLR182W (SWI6)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6272<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.053 3862 2410 YHR191C(CTF8) 0.055 2531 3741<br/>YHR031C(RRM3) -0.122 1787 4485 <span style='background:yellow;'>YCL016C(DCC1) -0.118 4436 1836</span><br/>YBL023C(MCM2) -0.012 5696 576 YMR078C(CTF18) 0.010 514 5758<br/>YGR092W(DBF2) 0.172 1031 5241<br/>YDR217C(RAD9) 0.013 5652 620<br/>YKL139W(CTK1) -0.107 2146 4126<br/>YPL084W(BRO1) 0.037 4549 1723<br/>YAL021C(CCR4) 0.041 4375 1897<br/>YJR145C(RPS4A) -0.001 6251 21<br/>YDR137W(RGP1) -0.121 1806 4466<br/>YJL006C(CTK2) -0.048 4100 2172<br/>YBR278W(DPB3) -0.077 2991 3281<br/>YNL307C(MCK1) -0.036 4584 1688<br/>YLR288C(MEC3) -0.137 1503 4769<br/>YJL124C(LSM1) -0.019 5339 933<br/>YOL012C(HTZ1) -0.078 2952 3320<br/>YJL179W(PFD1) -0.083 2783 3489<br/>YOR080W(DIA2) 0.056 3739 2533<br/>YNL250W(RAD50) -0.118 1861 4411<br/>YMR179W(SPT21) 0.118 1861 4411<br/>YMR190C(SGS1) -0.048 4100 2172<br/>YDL013W(SLX5) -0.081 2853 3419<br/>YFR027W(ECO1) 0.146 1367 4905<br/>YGL163C(RAD54) 0.276 390 5882<br/>YLR399C(BDF1) -0.058 3654 2618<br/>YPL253C(VIK1) -0.171 1046 5226<br/>YNL261W(ORC5) -0.030 4849 1423<br/>YMR198W(CIK1) -0.346 249 6023<br/>YNL297C(MON2) -0.034 4677 1595<br/>YDR004W(RAD57) -0.113 1985 4287<br/>YDR076W(RAD55) 0.262 439 5833<br/>YNL206C(RTT106) -0.057 3698 2574<br/>YEL037C(RAD23) 0.019 5339 933<br/>YPR119W(CLB2) -0.039 4458 1814<br/>YDR075W(PPH3) -0.163 1129 5143<br/>YJL148W(RPA34) -0.018 5395 877<br/>YML102W(CAC2) 0.071 3213 3059<br/>YGL003C(CDH1) -0.047 4140 2132<br/>YOR368W(RAD17) -0.123 1759 4513<br/>YJL092W(SRS2) 0.071 3213 3059<br/>YGL168W(HUR1) -0.015 5544 728<br/>YDL003W(MCD1) -0.143 1413 4859<br/>YPR018W(RLF2) 0.058 3654 2618<br/>YNL273W(TOF1) 0.019 5339 933<br/>YAL024C(LTE1) 0.030 4850 1422<br/>YER095W(RAD51) 0.440 152 6120<br/>YCR077C(PAT1) 0.023 5155 1117<br/>YCR066W(RAD18) -0.052 3908 2364<br/>YPR120C(CLB5) -0.034 4677 1595<br/>YDR359C(EAF1) 0.221 645 5627<br/>YPR141C(KAR3) 0.034 4677 1595<br/>YMR116C(ASC1) -0.139 1468 4804<br/>YGR184C(UBR1) 0.083 2783 3489<br/>YOR198C(BFR1) 0.024 5119 1153<br/>YNL107W(YAF9) -0.054 3823 2449<br/>YLR103C(CDC45) 0.010 5813 459<br/>YML032C(RAD52) -0.062 3529 2743<br/>YGR180C(RNR4) 0.094 2473 3799<br/>YNL298W(CLA4) 0.151 1292 4980<br/>YPL194W(DDC1) -0.108 2119 4153<br/>YHR200W(RPN10) -0.010 5813 459<br/>YGL058W(RAD6) -0.058 3654 2618<br/>YLR357W(RSC2) -0.177 982 5290<br/>YBR195C(MSI1) -0.097 2394 3878<br/>YNL199C(GCR2) -0.069 3278 2994<br/>YPL008W(CHL1) 0.095 2444 3828<br/>YDR174W(HMO1) -0.062 3529 2743<br/>YDR335W(MSN5) -0.043 4309 1963<br/>YNL084C(END3) -0.064 3461 2811<br/>YNL147W(LSM7) 0.002 6207 65<br/>YDL017W(CDC7) 0.078 2952 3320<br/><u>YLR182W</u>(<u>SWI6</u>) -0.817 49 6223<br/>YMR224C(MRE11) 0.116 1912 4360<br/>YLR320W(MMS22) 0.194 829 5443<br/>YER173W(RAD24) -0.117 1889 4383<br/>YLR200W(YKE2) -0.053 3862 2410<br/>YDR225W(HTA1) -0.060 3593 2679<br/>YBR060C(ORC2) -0.226 611 5661<br/>YHR154W(RTT107) 0.087 2662 3610<br/>YDR369C(XRS2) -0.036 4584 1688<br/>YKL101W(HSL1) 0.141 1440 4832<br/>YCL061C(MRC1) -0.007 5960 312<br/>YDL101C(DUN1) 0.169 1064 5208<br/>YLR032W(RAD5) 0.047 4140 2132<br/>YMR048W(CSM3) -0.044 4270 2002<br/><br/><br/>ES Random Genesets = [0.23100802832021683] ES Random KOs = [0.23100802832021683] ES Random Genesets = [0.33483214875644141] ES Random KOs = [0.33483214875644141]<br/><br/>p Random Genesets = 0.91 p Random KOs = 0.65 p Random Genesets = 0.73 p Random KOs = 0.43 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p><p><FONT face="Verdana" size="1">Current BPM 38<br/>-----Knockout Gene:YGL058W (RAD6)-----<br/><br/>The length of the pathway opposite the knockout: 94<br/><br/>The length of the list of log10 values: 6274<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL074C(BRE1) -0.026 5162 1112 YDL020C(RPN4) 0.060 2514 3760<br/><u>YGL058W</u>(<u>RAD6</u>) -0.602 45 6229 <span style='background:yellow;'>YNL097C(PHO23) -0.207 5583 691</span><br/>YPL055C(LGE1) 0.008 5936 338 YER151C(UBP3) 0.051 2173 4101<br/> YJL115W(ASF1) 0.021 935 5339<br/> YDR392W(SPT3) -0.040 1735 4539<br/> YPL086C(ELP3) 0.049 2106 4168<br/> YAL011W(SWC3) 0.034 1467 4807<br/> <span style='background:yellow;'>YKL139W(CTK1) -0.131 4601 1673</span><br/> <span style='background:yellow;'>YJR060W(CBF1) -0.159 5063 1211</span><br/> YOR158W(PET123) 0.030 1298 4976<br/> YAL002W(VPS8) -0.046 1976 4298<br/> YHR013C(ARD1) -0.053 2255 4019<br/> YER017C(AFG3) 0.056 2368 3906<br/> <span style='background:yellow;'>YDR484W(VPS52) 0.128 4527 1747</span><br/> <span style='background:yellow;'>YGR104C(SRB5) -0.295 6008 266</span><br/> <span style='background:yellow;'>YDR137W(RGP1) -0.110 4101 2173</span><br/> <span style='background:yellow;'>YJL006C(CTK2) 0.083 3307 2967</span><br/> <span style='background:yellow;'>YFR010W(UBP6) 0.158 5049 1225</span><br/> <span style='background:yellow;'>YOL004W(SIN3) 0.097 3760 2514</span><br/> YJL029C(VPS53) -0.014 653 5621<br/> <span style='background:yellow;'>YGL071W(AFT1) 0.260 5891 383</span><br/> YLR085C(ARP6) -0.044 1895 4379<br/> YJL124C(LSM1) -0.077 3122 3152<br/> YOL012C(HTZ1) -0.041 1780 4494<br/> YNL250W(RAD50) -0.076 3082 3192<br/> <span style='background:yellow;'>YGL043W(DST1) 0.126 4494 1780</span><br/> <span style='background:yellow;'>YGL163C(RAD54) 0.122 4393 1881</span><br/> YIL040W(APQ12) -0.071 2926 3348<br/> <span style='background:yellow;'>YLR396C(VPS33) 0.133 4634 1640</span><br/> YIL084C(SDS3) -0.004 196 6078<br/> YNL297C(MON2) 0.036 1565 4709<br/> <span style='background:yellow;'>YDR004W(RAD57) -0.085 3381 2893</span><br/> <span style='background:yellow;'>YDR076W(RAD55) 0.157 5031 1243</span><br/> <span style='background:yellow;'>YGL127C(SOH1) 0.081 3244 3030</span><br/> <span style='background:yellow;'>YMR231W(PEP5) -0.093 3631 2643</span><br/> <span style='background:yellow;'>YHR090C(YNG2) 0.079 3180 3094</span><br/> <span style='background:yellow;'>YKL212W(SAC1) -0.109 4066 2208</span><br/> <span style='background:yellow;'>YOR147W(MDM32) 0.150 4914 1360</span><br/> YMR263W(SAP30) 0.075 3049 3225<br/> <span style='background:yellow;'>YNL215W(IES2) 0.089 3511 2763</span><br/> <span style='background:yellow;'>YLR337C(VRP1) 0.187 5409 865</span><br/> YLR039C(RIC1) -0.051 2173 4101<br/> <span style='background:yellow;'>YGL070C(RPB9) -0.153 4967 1307</span><br/> YHR194W(MDM31) 0.023 1034 5240<br/> <span style='background:yellow;'>YLR384C(IKI3) -0.096 3729 2545</span><br/> YLR055C(SPT8) 0.032 1379 4895<br/> <span style='background:yellow;'>YKR020W(VPS51) 0.088 3485 2789</span><br/> <span style='background:yellow;'>YDR334W(SWR1) -0.154 4989 1285</span><br/> YDL048C(STP4) 0.045 1938 4336<br/> <span style='background:yellow;'>YOR297C(TIM18) -0.106 4002 2272</span><br/> <span style='background:yellow;'>YAL024C(LTE1) 0.083 3307 2967</span><br/> <span style='background:yellow;'>YER095W(RAD51) 0.227 5731 543</span><br/> YGR285C(ZUO1) 0.040 1735 4539<br/> <span style='background:yellow;'>YDR359C(EAF1) -0.421 6177 97</span><br/> <span style='background:yellow;'>YMR116C(ASC1) -0.100 3848 2426</span><br/> YBR231C(SWC5) 0.017 783 5491<br/> <span style='background:yellow;'>YGR200C(ELP2) -0.153 4967 1307</span><br/> YDR323C(PEP7) -0.001 82 6192<br/> YLR148W(PEP3) -0.074 3020 3254<br/> YNL107W(YAF9) 0.069 2858 3416<br/> <span style='background:yellow;'>YPL213W(LEA1) 0.114 4207 2067</span><br/> <span style='background:yellow;'>YML032C(RAD52) 0.091 3567 2707</span><br/> YDR363W-A(SEM1) NaN N/A N/A<br/> YER111C(SWI4) -0.051 2173 4101<br/> <span style='background:yellow;'>YNL330C(RPD3) -0.164 5142 1132</span><br/> <span style='background:yellow;'>YML041C(VPS71) 0.096 3729 2545</span><br/> YJR104C(SOD1) 0.049 2106 4168<br/> YML028W(TSA1) 0.058 2434 3840<br/> <span style='background:yellow;'>YGR135W(PRE9) 0.102 3905 2369</span><br/> YHR200W(RPN10) 0.050 2138 4136<br/> <span style='background:yellow;'>YNL199C(GCR2) -0.138 4736 1538</span><br/> YHR041C(SRB2) -0.015 702 5572<br/> <span style='background:yellow;'>YJL168C(SET2) -0.108 4047 2227</span><br/> YOL009C(MDM12) -0.054 2288 3986<br/> <span style='background:yellow;'>YMR312W(ELP6) 0.138 4736 1538</span><br/> <span style='background:yellow;'>YFL023W(BUD27) 0.113 4179 2095</span><br/> <span style='background:yellow;'>YCR024C(SLM5) 0.175 5280 994</span><br/> YLR262C(YPT6) 0.065 2690 3584<br/> YDR485C(VPS72) 0.060 2514 3760<br/> YLR182W(SWI6) 0.038 1645 4629<br/> <span style='background:yellow;'>YMR224C(MRE11) -0.402 6167 107</span><br/> YML112W(CTK3) 0.059 2466 3808<br/> YDR432W(NPL3) 0.073 2985 3289<br/> YMR165C(PAH1) -0.040 1735 4539<br/> YPL101W(ELP4) 0.006 296 5978<br/> YIR009W(MSL1) 0.022 984 5290<br/> YKL155C(RSM22) -0.036 1565 4709<br/> YDR207C(UME6) -0.015 702 5572<br/> YDR369C(XRS2) 0.034 1467 4807<br/> YBR095C(RXT2) 0.052 2220 4054<br/> <span style='background:yellow;'>YKL113C(RAD27) -0.090 3539 2735</span><br/> <span style='background:yellow;'>YDL101C(DUN1) 0.210 5610 664</span><br/> YEL044W(IES6) -0.045 1938 4336<br/> YGL095C(VPS45) -0.002 122 6152<br/><br/><br/>ES Random Genesets = [-0.81861651259164803] ES Random KOs = [-0.81861651259164803] ES Random Genesets = [0.22740286543819777] ES Random KOs = [0.22740286543819777]<br/><br/>p Random Genesets = 0.94 p Random KOs = 0.99 p Random Genesets = 0.93 p Random KOs = 0.64 ES Pruned Random Genesets =[0.50685368186165125]p Pruned Random Genesets = 0.0 ES Pruned Random KOs =[0.50685368186165125] p Pruned Random KOs = 0.0<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YAL002W (VPS8)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6224<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.106 714 5510 YDL074C(BRE1) 0.010 966 5258<br/>YNL097C(PHO23) -0.016 4781 1443 YGL058W(RAD6) -0.007 680 5544<br/>YER151C(UBP3) -0.027 3888 2336 <span style='background:yellow;'>YPL055C(LGE1) -0.098 5408 816</span><br/>YJL115W(ASF1) -0.000 6224 0<br/>YDR392W(SPT3) -0.010 5350 874<br/>YPL086C(ELP3) -0.035 3280 2944<br/>YAL011W(SWC3) -0.054 2170 4054<br/>YKL139W(CTK1) -0.016 4781 1443<br/>YJR060W(CBF1) -0.015 4887 1337<br/>YOR158W(PET123) 0.100 797 5427<br/><u>YAL002W</u>(<u>VPS8</u>) 0.004 5901 323<br/>YHR013C(ARD1) -0.058 1995 4229<br/>YER017C(AFG3) -0.029 3717 2507<br/>YDR484W(VPS52) 0.009 5442 782<br/>YGR104C(SRB5) -0.037 3146 3078<br/>YDR137W(RGP1) 0.041 2911 3313<br/>YJL006C(CTK2) -0.015 4887 1337<br/>YFR010W(UBP6) 0.105 731 5493<br/>YOL004W(SIN3) -0.047 2528 3696<br/>YJL029C(VPS53) -0.003 6008 216<br/>YGL071W(AFT1) -0.033 3404 2820<br/>YLR085C(ARP6) 0.006 5702 522<br/>YJL124C(LSM1) -0.005 5803 421<br/>YOL012C(HTZ1) 0.004 5900 324<br/>YNL250W(RAD50) -0.018 4586 1638<br/>YGL043W(DST1) -0.059 1949 4275<br/>YGL163C(RAD54) 0.018 4586 1638<br/>YIL040W(APQ12) 0.010 5350 874<br/>YLR396C(VPS33) 0.009 5442 782<br/>YIL084C(SDS3) 0.035 3280 2944<br/>YNL297C(MON2) 0.044 2714 3510<br/>YDR004W(RAD57) 0.049 2421 3803<br/>YDR076W(RAD55) -0.003 6008 216<br/>YGL127C(SOH1) 0.014 4980 1244<br/>YMR231W(PEP5) 0.033 3404 2820<br/>YHR090C(YNG2) 0.060 1909 4315<br/>YKL212W(SAC1) 0.013 5089 1135<br/>YOR147W(MDM32) 0.037 3146 3078<br/>YMR263W(SAP30) 0.035 3280 2944<br/>YNL215W(IES2) 0.011 5256 968<br/>YLR337C(VRP1) -0.030 3633 2591<br/>YLR039C(RIC1) 0.026 3950 2274<br/>YGL070C(RPB9) -0.006 5702 522<br/>YHR194W(MDM31) -0.078 1304 4920<br/>YLR384C(IKI3) -0.031 3552 2672<br/>YLR055C(SPT8) -0.042 2848 3376<br/>YKR020W(VPS51) 0.023 4188 2036<br/>YDR334W(SWR1) 0.069 1564 4660<br/>YDL048C(STP4) 0.059 1949 4275<br/>YOR297C(TIM18) -0.085 1097 5127<br/>YAL024C(LTE1) 0.064 1734 4490<br/>YER095W(RAD51) 0.044 2714 3510<br/>YGR285C(ZUO1) -0.086 1073 5151<br/>YDR359C(EAF1) 0.032 3480 2744<br/>YMR116C(ASC1) -0.005 5803 421<br/>YBR231C(SWC5) -0.030 3633 2591<br/>YGR200C(ELP2) -0.050 2362 3862<br/>YDR323C(PEP7) 0.006 5702 522<br/>YLR148W(PEP3) 0.052 2266 3958<br/>YNL107W(YAF9) -0.012 5181 1043<br/>YPL213W(LEA1) -0.053 2213 4011<br/>YML032C(RAD52) -0.039 3032 3192<br/>YDR363W-A(SEM1) -0.023 4188 2036<br/>YER111C(SWI4) 0.126 503 5721<br/>YNL330C(RPD3) -0.024 4105 2119<br/>YML041C(VPS71) -0.011 5256 968<br/>YJR104C(SOD1) -0.062 1811 4413<br/>YML028W(TSA1) 0.068 1596 4628<br/>YGR135W(PRE9) -0.005 5803 421<br/>YHR200W(RPN10) -0.011 5256 968<br/>YNL199C(GCR2) -0.075 1391 4833<br/>YHR041C(SRB2) -0.014 4980 1244<br/>YJL168C(SET2) -0.036 3204 3020<br/>YOL009C(MDM12) 0.035 3280 2944<br/>YMR312W(ELP6) -0.003 6008 216<br/>YFL023W(BUD27) -0.053 2213 4011<br/>YCR024C(SLM5) 0.053 2213 4011<br/>YLR262C(YPT6) 0.068 1596 4628<br/>YDR485C(VPS72) 0.004 5900 324<br/>YLR182W(SWI6) 0.022 4276 1948<br/>YMR224C(MRE11) -0.032 3480 2744<br/>YML112W(CTK3) -0.014 4980 1244<br/>YDR432W(NPL3) -0.090 980 5244<br/>YMR165C(PAH1) -0.029 3717 2507<br/>YPL101W(ELP4) -0.112 630 5594<br/>YIR009W(MSL1) -0.008 5542 682<br/>YKL155C(RSM22) -0.028 3793 2431<br/>YDR207C(UME6) 0.025 4022 2202<br/>YDR369C(XRS2) 0.030 3633 2591<br/>YBR095C(RXT2) 0.016 4781 1443<br/>YKL113C(RAD27) 0.008 5542 682<br/>YDL101C(DUN1) 0.126 503 5721<br/>YEL044W(IES6) -0.083 1160 5064<br/>YGL095C(VPS45) 0.010 5350 874<br/><br/><br/>ES Random Genesets = [0.21800051101208806] ES Random KOs = [0.21800051101208806] ES Random Genesets = [0.63555181730652199] ES Random KOs = [0.63555181730652199]<br/><br/>p Random Genesets = 0.79 p Random KOs = 0.8 p Random Genesets = 0.21 p Random KOs = 0.19 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YHR013C (ARD1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.070 1120 5108 <span style='background:yellow;'>YDL074C(BRE1) 0.058 4692 1536</span><br/>YNL097C(PHO23) -0.001 6166 62 YGL058W(RAD6) 0.026 2690 3538<br/>YER151C(UBP3) 0.034 2989 3239 <span style='background:yellow;'>YPL055C(LGE1) 0.084 5463 765</span><br/>YJL115W(ASF1) 0.035 2910 3318<br/>YDR392W(SPT3) 0.045 2238 3990<br/>YPL086C(ELP3) -0.029 3387 2841<br/>YAL011W(SWC3) 0.040 2560 3668<br/>YKL139W(CTK1) 0.045 2238 3990<br/>YJR060W(CBF1) -0.004 5808 420<br/>YOR158W(PET123) 0.077 930 5298<br/>YAL002W(VPS8) -0.007 5504 724<br/><u>YHR013C</u>(<u>ARD1</u>) -0.864 3 6225<br/>YER017C(AFG3) 0.025 3697 2531<br/>YDR484W(VPS52) 0.039 2634 3594<br/>YGR104C(SRB5) -0.016 4577 1651<br/>YDR137W(RGP1) 0.016 4577 1651<br/>YJL006C(CTK2) 0.047 2112 4116<br/>YFR010W(UBP6) 0.073 1030 5198<br/>YOL004W(SIN3) 0.083 798 5430<br/>YJL029C(VPS53) 0.022 4000 2228<br/>YGL071W(AFT1) 0.048 2054 4174<br/>YLR085C(ARP6) 0.084 785 5443<br/>YJL124C(LSM1) 0.023 3905 2323<br/>YOL012C(HTZ1) -0.017 4491 1737<br/>YNL250W(RAD50) 0.015 4670 1558<br/>YGL043W(DST1) 0.067 1218 5010<br/>YGL163C(RAD54) -0.021 4098 2130<br/>YIL040W(APQ12) 0.040 2560 3668<br/>YLR396C(VPS33) 0.072 1055 5173<br/>YIL084C(SDS3) 0.003 5914 314<br/>YNL297C(MON2) 0.005 5712 516<br/>YDR004W(RAD57) 0.053 1805 4423<br/>YDR076W(RAD55) -0.035 2910 3318<br/>YGL127C(SOH1) 0.002 6045 183<br/>YMR231W(PEP5) -0.033 3069 3159<br/>YHR090C(YNG2) 0.035 2910 3318<br/>YKL212W(SAC1) -0.010 5167 1061<br/>YOR147W(MDM32) 0.052 1856 4372<br/>YMR263W(SAP30) 0.019 4295 1933<br/>YNL215W(IES2) -0.012 4982 1246<br/>YLR337C(VRP1) 0.020 4199 2029<br/>YLR039C(RIC1) 0.033 3069 3159<br/>YGL070C(RPB9) 0.032 3148 3080<br/>YHR194W(MDM31) -0.037 2782 3446<br/>YLR384C(IKI3) -0.036 2848 3380<br/>YLR055C(SPT8) 0.017 4491 1737<br/>YKR020W(VPS51) 0.077 930 5298<br/>YDR334W(SWR1) 0.054 1750 4478<br/>YDL048C(STP4) -0.052 1856 4372<br/>YOR297C(TIM18) -0.043 2372 3856<br/>YAL024C(LTE1) -0.008 5390 838<br/>YER095W(RAD51) -0.052 1856 4372<br/>YGR285C(ZUO1) -0.034 2989 3239<br/>YDR359C(EAF1) 0.002 6045 183<br/>YMR116C(ASC1) -0.038 2698 3530<br/>YBR231C(SWC5) 0.017 4491 1737<br/>YGR200C(ELP2) -0.025 3697 2531<br/>YDR323C(PEP7) 0.004 5808 420<br/>YLR148W(PEP3) 0.079 887 5341<br/>YNL107W(YAF9) 0.026 3615 2613<br/>YPL213W(LEA1) 0.065 1290 4938<br/>YML032C(RAD52) -0.018 4396 1832<br/>YDR363W-A(SEM1) -0.001 6166 62<br/>YER111C(SWI4) -0.030 3312 2916<br/>YNL330C(RPD3) 0.009 5281 947<br/>YML041C(VPS71) 0.008 5389 839<br/>YJR104C(SOD1) -0.008 5389 839<br/>YML028W(TSA1) -0.074 999 5229<br/>YGR135W(PRE9) -0.047 2112 4116<br/>YHR200W(RPN10) -0.024 3806 2422<br/>YNL199C(GCR2) 0.046 2171 4057<br/>YHR041C(SRB2) -0.042 2430 3798<br/>YJL168C(SET2) -0.000 6228 0<br/>YOL009C(MDM12) -0.010 5167 1061<br/>YMR312W(ELP6) 0.011 5086 1142<br/>YFL023W(BUD27) 0.006 5610 618<br/>YCR024C(SLM5) 0.095 587 5641<br/>YLR262C(YPT6) 0.080 863 5365<br/>YDR485C(VPS72) 0.015 4670 1558<br/>YLR182W(SWI6) -0.015 4670 1558<br/>YMR224C(MRE11) -0.023 3905 2323<br/>YML112W(CTK3) 0.059 1534 4694<br/>YDR432W(NPL3) -0.019 4295 1933<br/>YMR165C(PAH1) 0.002 6045 183<br/>YPL101W(ELP4) -0.001 6166 62<br/>YIR009W(MSL1) 0.057 1607 4621<br/>YKL155C(RSM22) 0.112 395 5833<br/>YDR207C(UME6) -0.049 2001 4227<br/>YDR369C(XRS2) 0.018 4396 1832<br/>YBR095C(RXT2) 0.060 1485 4743<br/>YKL113C(RAD27) 0.046 2171 4057<br/>YDL101C(DUN1) -0.002 6045 183<br/>YEL044W(IES6) -0.051 1897 4331<br/>YGL095C(VPS45) 0.054 1750 4478<br/><br/><br/>ES Random Genesets = [0.27393082488717291] ES Random KOs = [0.27393082488717291] ES Random Genesets = [0.543951861193675] ES Random KOs = [0.543951861193675]<br/><br/>p Random Genesets = 0.74 p Random KOs = 0.65 p Random Genesets = 0.31 p Random KOs = 0.35 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YER017C (AFG3)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6274<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.113 1311 4963 <span style='background:yellow;'>YDL074C(BRE1) -0.064 3444 2830</span><br/>YNL097C(PHO23) -0.071 2562 3712 YGL058W(RAD6) -0.041 2359 3915<br/>YER151C(UBP3) 0.068 2691 3583 YPL055C(LGE1) 0.009 540 5734<br/>YJL115W(ASF1) 0.045 3758 2516<br/>YDR392W(SPT3) 0.091 1874 4400<br/>YPL086C(ELP3) -0.168 583 5691<br/>YAL011W(SWC3) -0.022 4978 1296<br/>YKL139W(CTK1) 0.027 4695 1579<br/>YJR060W(CBF1) -0.102 1557 4717<br/>YOR158W(PET123) 0.171 553 5721<br/>YAL002W(VPS8) 0.055 3256 3018<br/>YHR013C(ARD1) -0.057 3166 3108<br/><u>YER017C</u>(<u>AFG3</u>) -0.241 242 6032<br/>YDR484W(VPS52) -0.020 5107 1167<br/>YGR104C(SRB5) -0.091 1874 4400<br/>YDR137W(RGP1) -0.124 1097 5177<br/>YJL006C(CTK2) -0.020 5107 1167<br/>YFR010W(UBP6) -0.027 4695 1579<br/>YOL004W(SIN3) 0.020 5107 1167<br/>YJL029C(VPS53) -0.013 5535 739<br/>YGL071W(AFT1) 0.153 709 5565<br/>YLR085C(ARP6) -0.035 4250 2024<br/>YJL124C(LSM1) -0.073 2485 3789<br/>YOL012C(HTZ1) 0.013 5535 739<br/>YNL250W(RAD50) 0.041 3962 2312<br/>YGL043W(DST1) -0.082 2146 4128<br/>YGL163C(RAD54) 0.039 4058 2216<br/>YIL040W(APQ12) -0.002 6184 90<br/>YLR396C(VPS33) 0.007 5906 368<br/>YIL084C(SDS3) 0.044 3813 2461<br/>YNL297C(MON2) -0.021 5045 1229<br/>YDR004W(RAD57) -0.053 3343 2931<br/>YDR076W(RAD55) 0.003 6121 153<br/>YGL127C(SOH1) -0.066 2786 3488<br/>YMR231W(PEP5) 0.077 2328 3946<br/>YHR090C(YNG2) -0.054 3304 2970<br/>YKL212W(SAC1) -0.011 5656 618<br/>YOR147W(MDM32) -0.050 3485 2789<br/>YMR263W(SAP30) -0.154 700 5574<br/>YNL215W(IES2) 0.081 2182 4092<br/>YLR337C(VRP1) 0.065 2828 3446<br/>YLR039C(RIC1) -0.016 5369 905<br/>YGL070C(RPB9) -0.027 4695 1579<br/>YHR194W(MDM31) 0.042 3913 2361<br/>YLR384C(IKI3) -0.087 1996 4278<br/>YLR055C(SPT8) -0.006 5965 309<br/>YKR020W(VPS51) 0.054 3304 2970<br/>YDR334W(SWR1) 0.011 5656 618<br/>YDL048C(STP4) 0.046 3701 2573<br/>YOR297C(TIM18) 0.082 2146 4128<br/>YAL024C(LTE1) -0.073 2486 3788<br/>YER095W(RAD51) -0.007 5906 368<br/>YGR285C(ZUO1) -0.203 381 5893<br/>YDR359C(EAF1) 0.141 841 5433<br/>YMR116C(ASC1) -0.116 1251 5023<br/>YBR231C(SWC5) -0.024 4856 1418<br/>YGR200C(ELP2) -0.164 616 5658<br/>YDR323C(PEP7) -0.003 6121 153<br/>YLR148W(PEP3) 0.014 5478 796<br/>YNL107W(YAF9) -0.086 2023 4251<br/>YPL213W(LEA1) -0.030 4512 1762<br/>YML032C(RAD52) -0.111 1349 4925<br/>YDR363W-A(SEM1) NaN N/A N/A<br/>YER111C(SWI4) 0.006 5965 309<br/>YNL330C(RPD3) -0.023 4927 1347<br/>YML041C(VPS71) -0.021 5045 1229<br/>YJR104C(SOD1) 0.016 5369 905<br/>YML028W(TSA1) -0.009 5791 483<br/>YGR135W(PRE9) 0.018 5236 1038<br/>YHR200W(RPN10) -0.042 3913 2361<br/>YNL199C(GCR2) -0.004 6073 201<br/>YHR041C(SRB2) 0.034 4297 1977<br/>YJL168C(SET2) -0.127 1049 5225<br/>YOL009C(MDM12) 0.007 5906 368<br/>YMR312W(ELP6) -0.147 771 5503<br/>YFL023W(BUD27) -0.018 5236 1038<br/>YCR024C(SLM5) 0.030 4512 1762<br/>YLR262C(YPT6) -0.043 3864 2410<br/>YDR485C(VPS72) 0.070 2601 3673<br/>YLR182W(SWI6) 0.016 5369 905<br/>YMR224C(MRE11) 0.016 5369 905<br/>YML112W(CTK3) 0.001 6240 34<br/>YDR432W(NPL3) 0.020 5107 1167<br/>YMR165C(PAH1) -0.067 2742 3532<br/>YPL101W(ELP4) 0.015 5420 854<br/>YIR009W(MSL1) 0.001 6240 34<br/>YKL155C(RSM22) 0.047 3653 2621<br/>YDR207C(UME6) -0.043 3864 2410<br/>YDR369C(XRS2) 0.049 3549 2725<br/>YBR095C(RXT2) 0.027 4695 1579<br/>YKL113C(RAD27) -0.083 2113 4161<br/>YDL101C(DUN1) -0.018 5236 1038<br/>YEL044W(IES6) 0.047 3653 2621<br/>YGL095C(VPS45) -0.001 6240 34<br/><br/><br/>ES Random Genesets = [0.18758987855390497] ES Random KOs = [0.18758987855390497] ES Random Genesets = [-0.45106789926681545] ES Random KOs = [-0.45106789926681545]<br/><br/>p Random Genesets = 0.79 p Random KOs = 0.79 p Random Genesets = 0.86 p Random KOs = 0.89 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YOL004W (SIN3)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.020 5118 1110 <span style='background:yellow;'>YDL074C(BRE1) -0.113 4685 1543</span><br/>YNL097C(PHO23) 0.031 4513 1715 YGL058W(RAD6) -0.036 2024 4204<br/>YER151C(UBP3) 0.051 3577 2651 YPL055C(LGE1) 0.026 1498 4730<br/>YJL115W(ASF1) 0.078 2555 3673<br/>YDR392W(SPT3) 0.045 3852 2376<br/>YPL086C(ELP3) 0.041 4022 2206<br/>YAL011W(SWC3) -0.077 2596 3632<br/>YKL139W(CTK1) 0.100 1873 4355<br/>YJR060W(CBF1) -0.000 6228 0<br/>YOR158W(PET123) -0.076 2623 3605<br/>YAL002W(VPS8) 0.060 3214 3014<br/>YHR013C(ARD1) 0.110 1629 4599<br/>YER017C(AFG3) 0.194 546 5682<br/>YDR484W(VPS52) -0.088 2202 4026<br/>YGR104C(SRB5) 0.026 4782 1446<br/>YDR137W(RGP1) -0.060 3213 3015<br/>YJL006C(CTK2) -0.028 4675 1553<br/>YFR010W(UBP6) -0.117 1477 4751<br/><u>YOL004W</u>(<u>SIN3</u>) -0.688 23 6205<br/>YJL029C(VPS53) -0.076 2623 3605<br/>YGL071W(AFT1) -0.046 3807 2421<br/>YLR085C(ARP6) -0.114 1541 4687<br/>YJL124C(LSM1) -0.006 5904 324<br/>YOL012C(HTZ1) 0.057 3330 2898<br/>YNL250W(RAD50) -0.006 5904 324<br/>YGL043W(DST1) -0.018 5228 1000<br/>YGL163C(RAD54) 0.171 726 5502<br/>YIL040W(APQ12) -0.148 963 5265<br/>YLR396C(VPS33) -0.091 2122 4106<br/>YIL084C(SDS3) -0.038 4155 2073<br/>YNL297C(MON2) -0.084 2346 3882<br/>YDR004W(RAD57) -0.022 5006 1222<br/>YDR076W(RAD55) 0.030 4569 1659<br/>YGL127C(SOH1) 0.033 4400 1828<br/>YMR231W(PEP5) -0.046 3807 2421<br/>YHR090C(YNG2) -0.056 3366 2862<br/>YKL212W(SAC1) 0.013 5527 701<br/>YOR147W(MDM32) -0.097 1958 4270<br/>YMR263W(SAP30) -0.023 4954 1274<br/>YNL215W(IES2) -0.057 3330 2898<br/>YLR337C(VRP1) 0.139 1085 5143<br/>YLR039C(RIC1) -0.075 2651 3577<br/>YGL070C(RPB9) -0.052 3529 2699<br/>YHR194W(MDM31) 0.053 3485 2743<br/>YLR384C(IKI3) -0.036 4264 1964<br/>YLR055C(SPT8) -0.015 5413 815<br/>YKR020W(VPS51) 0.168 761 5467<br/>YDR334W(SWR1) -0.072 2749 3479<br/>YDL048C(STP4) -0.437 61 6167<br/>YOR297C(TIM18) -0.188 580 5648<br/>YAL024C(LTE1) 0.083 2388 3840<br/>YER095W(RAD51) 0.478 51 6177<br/>YGR285C(ZUO1) 0.097 1958 4270<br/>YDR359C(EAF1) 0.024 4895 1333<br/>YMR116C(ASC1) 0.011 5634 594<br/>YBR231C(SWC5) 0.061 3168 3060<br/>YGR200C(ELP2) 0.019 5174 1054<br/>YDR323C(PEP7) -0.001 6193 35<br/>YLR148W(PEP3) -0.107 1695 4533<br/>YNL107W(YAF9) 0.028 4675 1553<br/>YPL213W(LEA1) 0.009 5748 480<br/>YML032C(RAD52) 0.025 4841 1387<br/>YDR363W-A(SEM1) -0.008 5807 421<br/>YER111C(SWI4) 0.091 2122 4106<br/>YNL330C(RPD3) -0.026 4782 1446<br/>YML041C(VPS71) 0.020 5118 1110<br/>YJR104C(SOD1) 0.009 5748 480<br/>YML028W(TSA1) -0.056 3366 2862<br/>YGR135W(PRE9) -0.067 2953 3275<br/>YHR200W(RPN10) 0.080 2481 3747<br/>YNL199C(GCR2) 0.004 6022 206<br/>YHR041C(SRB2) 0.011 5634 594<br/>YJL168C(SET2) -0.108 1669 4559<br/>YOL009C(MDM12) -0.086 2278 3950<br/>YMR312W(ELP6) -0.120 1421 4807<br/>YFL023W(BUD27) 0.026 4782 1446<br/>YCR024C(SLM5) 0.044 3897 2331<br/>YLR262C(YPT6) -0.080 2481 3747<br/>YDR485C(VPS72) 0.029 4616 1612<br/>YLR182W(SWI6) -0.018 5228 1000<br/>YMR224C(MRE11) -0.031 4513 1715<br/>YML112W(CTK3) 0.062 3121 3107<br/>YDR432W(NPL3) 0.049 3678 2550<br/>YMR165C(PAH1) 0.158 850 5378<br/>YPL101W(ELP4) 0.011 5634 594<br/>YIR009W(MSL1) -0.075 2651 3577<br/>YKL155C(RSM22) 0.146 978 5250<br/>YDR207C(UME6) 0.229 365 5863<br/>YDR369C(XRS2) 0.100 1873 4355<br/>YBR095C(RXT2) -0.002 6140 88<br/>YKL113C(RAD27) 0.209 462 5766<br/>YDL101C(DUN1) 0.229 366 5862<br/>YEL044W(IES6) 0.120 1421 4807<br/>YGL095C(VPS45) -0.131 1221 5007<br/><br/><br/>ES Random Genesets = [0.24365680840596349] ES Random KOs = [0.24365680840596349] ES Random Genesets = [0.32310206154981974] ES Random KOs = [0.32310206154981974]<br/><br/>p Random Genesets = 0.76 p Random KOs = 0.76 p Random Genesets = 0.74 p Random KOs = 0.75 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YDR004W (RAD57)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.091 1149 5079 <span style='background:yellow;'>YDL074C(BRE1) -0.061 4081 2147</span><br/>YNL097C(PHO23) 0.019 4754 1474 <span style='background:yellow;'>YGL058W(RAD6) -0.092 5136 1092</span><br/>YER151C(UBP3) -0.051 2671 3557 <span style='background:yellow;'>YPL055C(LGE1) 0.090 5077 1151</span><br/>YJL115W(ASF1) 0.045 3009 3219<br/>YDR392W(SPT3) -0.031 3879 2349<br/>YPL086C(ELP3) -0.091 1149 5079<br/>YAL011W(SWC3) -0.005 5835 393<br/>YKL139W(CTK1) -0.036 3530 2698<br/>YJR060W(CBF1) -0.047 2886 3342<br/>YOR158W(PET123) -0.054 2488 3740<br/>YAL002W(VPS8) 0.010 5446 782<br/>YHR013C(ARD1) -0.028 4097 2131<br/>YER017C(AFG3) 0.095 1051 5177<br/>YDR484W(VPS52) 0.011 5374 854<br/>YGR104C(SRB5) 0.029 4035 2193<br/>YDR137W(RGP1) 0.032 3800 2428<br/>YJL006C(CTK2) -0.038 3419 2809<br/>YFR010W(UBP6) -0.040 3287 2941<br/>YOL004W(SIN3) 0.073 1706 4522<br/>YJL029C(VPS53) 0.027 4159 2069<br/>YGL071W(AFT1) -0.012 5307 921<br/>YLR085C(ARP6) -0.003 6017 211<br/>YJL124C(LSM1) -0.113 728 5500<br/>YOL012C(HTZ1) -0.044 3059 3169<br/>YNL250W(RAD50) 0.008 5598 630<br/>YGL043W(DST1) -0.060 2233 3995<br/>YGL163C(RAD54) 0.107 823 5405<br/>YIL040W(APQ12) 0.093 1090 5138<br/>YLR396C(VPS33) 0.040 3287 2941<br/>YIL084C(SDS3) -0.026 4234 1994<br/>YNL297C(MON2) -0.023 4465 1763<br/><u>YDR004W</u>(<u>RAD57</u>) -0.548 7 6221<br/>YDR076W(RAD55) 0.044 3059 3169<br/>YGL127C(SOH1) -0.007 5669 559<br/>YMR231W(PEP5) -0.059 2272 3956<br/>YHR090C(YNG2) -0.106 836 5392<br/>YKL212W(SAC1) -0.023 4465 1763<br/>YOR147W(MDM32) 0.100 941 5287<br/>YMR263W(SAP30) 0.013 5230 998<br/>YNL215W(IES2) -0.083 1388 4840<br/>YLR337C(VRP1) 0.092 1114 5114<br/>YLR039C(RIC1) -0.002 6100 128<br/>YGL070C(RPB9) -0.075 1628 4600<br/>YHR194W(MDM31) 0.029 4035 2193<br/>YLR384C(IKI3) -0.038 3419 2809<br/>YLR055C(SPT8) -0.027 4159 2069<br/>YKR020W(VPS51) -0.011 5374 854<br/>YDR334W(SWR1) -0.092 1114 5114<br/>YDL048C(STP4) 0.059 2272 3956<br/>YOR297C(TIM18) -0.078 1523 4705<br/>YAL024C(LTE1) -0.091 1150 5078<br/>YER095W(RAD51) 0.279 84 6144<br/>YGR285C(ZUO1) -0.048 2831 3397<br/>YDR359C(EAF1) 0.003 6017 211<br/>YMR116C(ASC1) -0.004 5912 316<br/>YBR231C(SWC5) 0.025 4300 1928<br/>YGR200C(ELP2) -0.060 2233 3995<br/>YDR323C(PEP7) 0.018 4841 1387<br/>YLR148W(PEP3) 0.091 1149 5079<br/>YNL107W(YAF9) -0.059 2272 3956<br/>YPL213W(LEA1) -0.031 3879 2349<br/>YML032C(RAD52) -0.039 3349 2879<br/>YDR363W-A(SEM1) 0.001 6190 38<br/>YER111C(SWI4) -0.004 5912 316<br/>YNL330C(RPD3) -0.066 1990 4238<br/>YML041C(VPS71) 0.045 3009 3219<br/>YJR104C(SOD1) 0.075 1628 4600<br/>YML028W(TSA1) -0.088 1234 4994<br/>YGR135W(PRE9) -0.043 3116 3112<br/>YHR200W(RPN10) 0.020 4691 1537<br/>YNL199C(GCR2) -0.023 4465 1763<br/>YHR041C(SRB2) 0.016 4994 1234<br/>YJL168C(SET2) -0.040 3287 2941<br/>YOL009C(MDM12) -0.025 4300 1928<br/>YMR312W(ELP6) -0.111 755 5473<br/>YFL023W(BUD27) -0.012 5307 921<br/>YCR024C(SLM5) 0.058 2315 3913<br/>YLR262C(YPT6) -0.060 2233 3995<br/>YDR485C(VPS72) -0.056 2408 3820<br/>YLR182W(SWI6) -0.058 2315 3913<br/>YMR224C(MRE11) -0.088 1234 4994<br/>YML112W(CTK3) -0.004 5912 316<br/>YDR432W(NPL3) 0.034 3666 2562<br/>YMR165C(PAH1) 0.018 4841 1387<br/>YPL101W(ELP4) -0.068 1903 4325<br/>YIR009W(MSL1) -0.035 3600 2628<br/>YKL155C(RSM22) 0.056 2408 3820<br/>YDR207C(UME6) 0.013 5230 998<br/>YDR369C(XRS2) 0.030 3947 2281<br/>YBR095C(RXT2) -0.084 1355 4873<br/>YKL113C(RAD27) 0.007 5669 559<br/>YDL101C(DUN1) 0.040 3287 2941<br/>YEL044W(IES6) 0.113 728 5500<br/>YGL095C(VPS45) 0.003 6017 211<br/><br/><br/>ES Random Genesets = [0.24743771736421305] ES Random KOs = [0.24743771736421305] ES Random Genesets = [0.65526653821451508] ES Random KOs = [0.65526653821451508]<br/><br/>p Random Genesets = 0.74 p Random KOs = 0.71 p Random Genesets = 0.11 p Random KOs = 0.12 ES Pruned Random Genesets =[0.65526653821451508]p Pruned Random Genesets = 0.16 ES Pruned Random KOs =[0.65526653821451508] p Pruned Random KOs = 0.19<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YMR263W (SAP30)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6260<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.164 633 5627 YDL074C(BRE1) -0.049 2827 3433<br/>YNL097C(PHO23) 0.063 2896 3364 YGL058W(RAD6) -0.045 2641 3619<br/>YER151C(UBP3) -0.033 4309 1951 YPL055C(LGE1) 0.035 2140 4120<br/>YJL115W(ASF1) 0.033 4309 1951<br/>YDR392W(SPT3) 0.041 3873 2387<br/>YPL086C(ELP3) -0.048 3530 2730<br/>YAL011W(SWC3) -0.064 2853 3407<br/>YKL139W(CTK1) -0.024 4798 1462<br/>YJR060W(CBF1) -0.011 5610 650<br/>YOR158W(PET123) -0.011 5610 650<br/>YAL002W(VPS8) 0.036 4119 2141<br/>YHR013C(ARD1) -0.081 2208 4052<br/>YER017C(AFG3) 0.010 5668 592<br/>YDR484W(VPS52) 0.088 1973 4287<br/>YGR104C(SRB5) 0.084 2103 4157<br/>YDR137W(RGP1) -0.108 1461 4799<br/>YJL006C(CTK2) -0.017 5251 1009<br/>YFR010W(UBP6) 0.004 6055 205<br/>YOL004W(SIN3) -0.053 3305 2955<br/>YJL029C(VPS53) 0.041 3873 2387<br/>YGL071W(AFT1) 0.051 3392 2868<br/>YLR085C(ARP6) -0.044 3724 2536<br/>YJL124C(LSM1) -0.017 5251 1009<br/>YOL012C(HTZ1) 0.065 2815 3445<br/>YNL250W(RAD50) -0.085 2077 4183<br/>YGL043W(DST1) -0.174 537 5723<br/>YGL163C(RAD54) 0.121 1200 5060<br/>YIL040W(APQ12) -0.158 690 5570<br/>YLR396C(VPS33) -0.022 4925 1335<br/>YIL084C(SDS3) -0.056 3185 3075<br/>YNL297C(MON2) -0.077 2348 3912<br/>YDR004W(RAD57) 0.040 3914 2346<br/>YDR076W(RAD55) 0.121 1200 5060<br/>YGL127C(SOH1) 0.092 1859 4401<br/>YMR231W(PEP5) 0.080 2232 4028<br/>YHR090C(YNG2) -0.051 3392 2868<br/>YKL212W(SAC1) -0.048 3530 2730<br/>YOR147W(MDM32) 0.026 4696 1564<br/><u>YMR263W</u>(<u>SAP30</u>) -0.992 2 6258<br/>YNL215W(IES2) -0.071 2566 3694<br/>YLR337C(VRP1) 0.021 4989 1271<br/>YLR039C(RIC1) 0.023 4861 1399<br/>YGL070C(RPB9) -0.001 6228 32<br/>YHR194W(MDM31) 0.151 755 5505<br/>YLR384C(IKI3) -0.118 1250 5010<br/>YLR055C(SPT8) 0.148 798 5462<br/>YKR020W(VPS51) 0.040 3914 2346<br/>YDR334W(SWR1) -0.144 841 5419<br/>YDL048C(STP4) -0.064 2853 3407<br/>YOR297C(TIM18) -0.048 3530 2730<br/>YAL024C(LTE1) 0.146 827 5433<br/>YER095W(RAD51) 0.317 117 6143<br/>YGR285C(ZUO1) 0.092 1859 4401<br/>YDR359C(EAF1) -0.112 1365 4895<br/>YMR116C(ASC1) -0.136 961 5299<br/>YBR231C(SWC5) 0.110 1403 4857<br/>YGR200C(ELP2) -0.020 5054 1206<br/>YDR323C(PEP7) -0.095 1770 4490<br/>YLR148W(PEP3) -0.087 2008 4252<br/>YNL107W(YAF9) -0.061 2975 3285<br/>YPL213W(LEA1) 0.015 5377 883<br/>YML032C(RAD52) 0.158 690 5570<br/>YDR363W-A(SEM1) NaN N/A N/A<br/>YER111C(SWI4) 0.094 1792 4468<br/>YNL330C(RPD3) -0.072 2521 3739<br/>YML041C(VPS71) 0.087 2008 4252<br/>YJR104C(SOD1) 0.129 1069 5191<br/>YML028W(TSA1) -0.017 5251 1009<br/>YGR135W(PRE9) 0.041 3873 2387<br/>YHR200W(RPN10) 0.065 2815 3445<br/>YNL199C(GCR2) -0.038 4027 2233<br/>YHR041C(SRB2) -0.026 4696 1564<br/>YJL168C(SET2) 0.009 5731 529<br/>YOL009C(MDM12) 0.094 1792 4468<br/>YMR312W(ELP6) 0.029 4517 1743<br/>YFL023W(BUD27) -0.015 5377 883<br/>YCR024C(SLM5) 0.061 2975 3285<br/>YLR262C(YPT6) 0.032 4360 1900<br/>YDR485C(VPS72) 0.027 4631 1629<br/>YLR182W(SWI6) 0.012 5542 718<br/>YMR224C(MRE11) -0.009 5731 529<br/>YML112W(CTK3) 0.010 5668 592<br/>YDR432W(NPL3) -0.038 4027 2233<br/>YMR165C(PAH1) -0.021 4989 1271<br/>YPL101W(ELP4) -0.013 5489 771<br/>YIR009W(MSL1) 0.066 2769 3491<br/>YKL155C(RSM22) -0.047 3572 2688<br/>YDR207C(UME6) -0.134 985 5275<br/>YDR369C(XRS2) -0.014 5438 822<br/>YBR095C(RXT2) -0.025 4745 1515<br/>YKL113C(RAD27) 0.079 2267 3993<br/>YDL101C(DUN1) -0.131 1029 5231<br/>YEL044W(IES6) 0.001 6228 32<br/>YGL095C(VPS45) -0.037 4076 2184<br/><br/><br/>ES Random Genesets = [0.23945517042234599] ES Random KOs = [0.23945517042234599] ES Random Genesets = [-0.5484025559105431] ES Random KOs = [-0.5484025559105431]<br/><br/>p Random Genesets = 0.63 p Random KOs = 0.78 p Random Genesets = 0.88 p Random KOs = 0.89 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YER111C (SWI4)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6226<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.189 991 5235 <span style='background:yellow;'>YDL074C(BRE1) -0.144 4694 1532</span><br/>YNL097C(PHO23) -0.091 2668 3558 <span style='background:yellow;'>YGL058W(RAD6) -0.125 4336 1890</span><br/>YER151C(UBP3) 0.028 4916 1310 <span style='background:yellow;'>YPL055C(LGE1) 0.265 5722 504</span><br/>YJL115W(ASF1) 0.254 540 5686<br/>YDR392W(SPT3) -0.026 5008 1218<br/>YPL086C(ELP3) -0.123 1942 4284<br/>YAL011W(SWC3) 0.021 5234 992<br/>YKL139W(CTK1) -0.002 6150 76<br/>YJR060W(CBF1) -0.092 2644 3582<br/>YOR158W(PET123) -0.127 1870 4356<br/>YAL002W(VPS8) 0.040 4451 1775<br/>YHR013C(ARD1) -0.128 1847 4379<br/>YER017C(AFG3) 0.128 1847 4379<br/>YDR484W(VPS52) 0.017 5405 821<br/>YGR104C(SRB5) 0.022 5184 1042<br/>YDR137W(RGP1) 0.037 4556 1670<br/>YJL006C(CTK2) -0.046 4209 2017<br/>YFR010W(UBP6) -0.060 3676 2550<br/>YOL004W(SIN3) 0.097 2515 3711<br/>YJL029C(VPS53) -0.038 4523 1703<br/>YGL071W(AFT1) 0.053 3964 2262<br/>YLR085C(ARP6) -0.041 4407 1819<br/>YJL124C(LSM1) -0.222 737 5489<br/>YOL012C(HTZ1) -0.113 2140 4086<br/>YNL250W(RAD50) -0.069 3384 2842<br/>YGL043W(DST1) 0.052 3995 2231<br/>YGL163C(RAD54) 0.112 2161 4065<br/>YIL040W(APQ12) 0.165 1250 4976<br/>YLR396C(VPS33) 0.011 5711 515<br/>YIL084C(SDS3) 0.004 6063 163<br/>YNL297C(MON2) -0.005 6006 220<br/>YDR004W(RAD57) -0.101 2416 3810<br/>YDR076W(RAD55) 0.193 946 5280<br/>YGL127C(SOH1) -0.028 4916 1310<br/>YMR231W(PEP5) -0.079 3023 3203<br/>YHR090C(YNG2) -0.096 2544 3682<br/>YKL212W(SAC1) 0.037 4556 1670<br/>YOR147W(MDM32) 0.113 2140 4086<br/>YMR263W(SAP30) -0.045 4244 1982<br/>YNL215W(IES2) -0.006 5953 273<br/>YLR337C(VRP1) 0.184 1039 5187<br/>YLR039C(RIC1) 0.061 3648 2578<br/>YGL070C(RPB9) -0.162 1287 4939<br/>YHR194W(MDM31) 0.075 3161 3065<br/>YLR384C(IKI3) -0.010 5772 454<br/>YLR055C(SPT8) 0.054 3920 2306<br/>YKR020W(VPS51) 0.016 5464 762<br/>YDR334W(SWR1) -0.155 1383 4843<br/>YDL048C(STP4) 0.200 885 5341<br/>YOR297C(TIM18) -0.027 4959 1267<br/>YAL024C(LTE1) -0.046 4210 2016<br/>YER095W(RAD51) -0.092 2644 3582<br/>YGR285C(ZUO1) -0.059 3715 2511<br/>YDR359C(EAF1) -0.010 5772 454<br/>YMR116C(ASC1) -0.050 4061 2165<br/>YBR231C(SWC5) 0.078 3061 3165<br/>YGR200C(ELP2) 0.030 4821 1405<br/>YDR323C(PEP7) 0.014 5560 666<br/>YLR148W(PEP3) -0.023 5138 1088<br/>YNL107W(YAF9) 0.010 5772 454<br/>YPL213W(LEA1) 0.070 3345 2881<br/>YML032C(RAD52) 0.001 6198 28<br/>YDR363W-A(SEM1) 0.485 149 6077<br/><u>YER111C</u>(<u>SWI4</u>) -0.819 21 6205<br/>YNL330C(RPD3) -0.035 4637 1589<br/>YML041C(VPS71) 0.008 5867 359<br/>YJR104C(SOD1) -0.032 4745 1481<br/>YML028W(TSA1) -0.164 1263 4963<br/>YGR135W(PRE9) -0.114 2118 4108<br/>YHR200W(RPN10) -0.024 5096 1130<br/>YNL199C(GCR2) 0.049 4096 2130<br/>YHR041C(SRB2) 0.139 1638 4588<br/>YJL168C(SET2) -0.297 417 5809<br/>YOL009C(MDM12) 0.021 5233 993<br/>YMR312W(ELP6) -0.039 4490 1736<br/>YFL023W(BUD27) 0.069 3384 2842<br/>YCR024C(SLM5) 0.023 5138 1088<br/>YLR262C(YPT6) -0.101 2416 3810<br/>YDR485C(VPS72) 0.019 5306 920<br/>YLR182W(SWI6) -0.080 2991 3235<br/>YMR224C(MRE11) 0.047 4169 2057<br/>YML112W(CTK3) -0.010 5772 454<br/>YDR432W(NPL3) 0.228 687 5539<br/>YMR165C(PAH1) 0.138 1664 4562<br/>YPL101W(ELP4) -0.155 1383 4843<br/>YIR009W(MSL1) 0.001 6198 28<br/>YKL155C(RSM22) 0.412 241 5985<br/>YDR207C(UME6) -0.091 2668 3558<br/>YDR369C(XRS2) -0.014 5560 666<br/>YBR095C(RXT2) -0.132 1760 4466<br/>YKL113C(RAD27) 0.033 4707 1519<br/>YDL101C(DUN1) -0.201 876 5350<br/>YEL044W(IES6) 0.135 1712 4514<br/>YGL095C(VPS45) -0.027 4959 1267<br/><br/><br/>ES Random Genesets = [0.23348460225799222] ES Random KOs = [0.23348460225799222] ES Random Genesets = [0.69643430774172821] ES Random KOs = [0.69643430774172821]<br/><br/>p Random Genesets = 0.73 p Random KOs = 0.7 p Random Genesets = 0.09 p Random KOs = 0.13 ES Pruned Random Genesets =[0.69643430774172821]p Pruned Random Genesets = 0.15 ES Pruned Random KOs =[0.69643430774172821] p Pruned Random KOs = 0.09<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YNL330C (RPD3)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6230<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.056 4427 1803 YDL074C(BRE1) -0.062 2009 4221<br/>YNL097C(PHO23) -0.189 1749 4481 <span style='background:yellow;'>YGL058W(RAD6) -0.138 3742 2488</span><br/>YER151C(UBP3) -0.036 5079 1151 <span style='background:yellow;'>YPL055C(LGE1) -0.580 5963 267</span><br/>YJL115W(ASF1) 0.123 2765 3465<br/>YDR392W(SPT3) 0.038 5003 1227<br/>YPL086C(ELP3) 0.028 5346 884<br/>YAL011W(SWC3) 0.123 2766 3464<br/>YKL139W(CTK1) -0.102 3198 3032<br/>YJR060W(CBF1) -0.102 3198 3032<br/>YOR158W(PET123) 0.013 5824 406<br/>YAL002W(VPS8) -0.013 5825 405<br/>YHR013C(ARD1) 0.080 3760 2470<br/>YER017C(AFG3) 0.135 2559 3671<br/>YDR484W(VPS52) 1.050 127 6103<br/>YGR104C(SRB5) -0.067 4112 2118<br/>YDR137W(RGP1) -0.038 5003 1227<br/>YJL006C(CTK2) 0.074 3908 2322<br/>YFR010W(UBP6) -0.040 4938 1292<br/>YOL004W(SIN3) 0.060 4311 1919<br/>YJL029C(VPS53) -0.103 3174 3056<br/>YGL071W(AFT1) -0.074 3908 2322<br/>YLR085C(ARP6) -0.119 2848 3382<br/>YJL124C(LSM1) -0.172 1962 4268<br/>YOL012C(HTZ1) -0.017 5689 541<br/>YNL250W(RAD50) -0.014 5794 436<br/>YGL043W(DST1) -0.030 5281 949<br/>YGL163C(RAD54) 0.446 422 5808<br/>YIL040W(APQ12) -0.186 1789 4441<br/>YLR396C(VPS33) 0.013 5824 406<br/>YIL084C(SDS3) 0.039 4965 1265<br/>YNL297C(MON2) -0.084 3622 2608<br/>YDR004W(RAD57) 0.011 5884 346<br/>YDR076W(RAD55) 0.105 3138 3092<br/>YGL127C(SOH1) -0.012 5846 384<br/>YMR231W(PEP5) 0.217 1450 4780<br/>YHR090C(YNG2) 0.001 6201 29<br/>YKL212W(SAC1) -0.136 2540 3690<br/>YOR147W(MDM32) -0.154 2230 4000<br/>YMR263W(SAP30) 0.387 560 5670<br/>YNL215W(IES2) -0.065 4172 2058<br/>YLR337C(VRP1) 0.243 1203 5027<br/>YLR039C(RIC1) -0.204 1574 4656<br/>YGL070C(RPB9) -0.054 4490 1740<br/>YHR194W(MDM31) 0.300 837 5393<br/>YLR384C(IKI3) -0.058 4375 1855<br/>YLR055C(SPT8) -0.038 5003 1227<br/>YKR020W(VPS51) -0.082 3685 2545<br/>YDR334W(SWR1) -0.004 6108 122<br/>YDL048C(STP4) -0.129 2664 3566<br/>YOR297C(TIM18) -0.099 3255 2975<br/>YAL024C(LTE1) 0.219 1430 4800<br/>YER095W(RAD51) 0.578 272 5958<br/>YGR285C(ZUO1) 0.011 5884 346<br/>YDR359C(EAF1) 2.000 76 6154<br/>YMR116C(ASC1) -0.268 1035 5195<br/>YBR231C(SWC5) 0.185 1811 4419<br/>YGR200C(ELP2) -0.080 3760 2470<br/>YDR323C(PEP7) -0.135 2559 3671<br/>YLR148W(PEP3) -0.200 1611 4619<br/>YNL107W(YAF9) -0.200 1611 4619<br/>YPL213W(LEA1) 0.013 5824 406<br/>YML032C(RAD52) 0.283 928 5302<br/>YDR363W-A(SEM1) NaN N/A N/A<br/>YER111C(SWI4) 0.034 5146 1084<br/><u>YNL330C</u>(<u>RPD3</u>) -1.504 86 6144<br/>YML041C(VPS71) 0.304 819 5411<br/>YJR104C(SOD1) 0.186 1789 4441<br/>YML028W(TSA1) 0.233 1290 4940<br/>YGR135W(PRE9) -0.046 4734 1496<br/>YHR200W(RPN10) -0.045 4779 1451<br/>YNL199C(GCR2) -0.089 3505 2725<br/>YHR041C(SRB2) -0.038 5003 1227<br/>YJL168C(SET2) -0.038 5003 1227<br/>YOL009C(MDM12) -0.027 5373 857<br/>YMR312W(ELP6) 0.269 1025 5205<br/>YFL023W(BUD27) 0.012 5846 384<br/>YCR024C(SLM5) 0.091 3456 2774<br/>YLR262C(YPT6) 0.079 3788 2442<br/>YDR485C(VPS72) -0.028 5346 884<br/>YLR182W(SWI6) 0.019 5624 606<br/>YMR224C(MRE11) 0.177 1902 4328<br/>YML112W(CTK3) 0.372 592 5638<br/>YDR432W(NPL3) -0.037 5044 1186<br/>YMR165C(PAH1) 0.068 4092 2138<br/>YPL101W(ELP4) 0.117 2892 3338<br/>YIR009W(MSL1) -0.093 3399 2831<br/>YKL155C(RSM22) 0.105 3138 3092<br/>YDR207C(UME6) 0.236 1268 4962<br/>YDR369C(XRS2) 0.157 2185 4045<br/>YBR095C(RXT2) 0.036 5079 1151<br/>YKL113C(RAD27) 0.129 2664 3566<br/>YDL101C(DUN1) 0.269 1026 5204<br/>YEL044W(IES6) -0.188 1765 4465<br/>YGL095C(VPS45) -0.098 3274 2956<br/><br/><br/>ES Random Genesets = [0.22961240679633566] ES Random KOs = [0.22961240679633566] ES Random Genesets = [0.46619185833800819] ES Random KOs = [0.46619185833800819]<br/><br/>p Random Genesets = 0.7 p Random KOs = 0.78 p Random Genesets = 0.51 p Random KOs = 0.57 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YJR104C (SOD1)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6228<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) -0.014 5059 1169 <span style='background:yellow;'>YDL074C(BRE1) -0.044 3401 2827</span><br/>YNL097C(PHO23) -0.012 5240 988 <span style='background:yellow;'>YGL058W(RAD6) 0.155 5884 344</span><br/>YER151C(UBP3) -0.058 2194 4034 <span style='background:yellow;'>YPL055C(LGE1) 0.095 5167 1061</span><br/>YJL115W(ASF1) 0.037 3348 2880<br/>YDR392W(SPT3) -0.089 1202 5026<br/>YPL086C(ELP3) 0.111 799 5429<br/>YAL011W(SWC3) 0.014 5059 1169<br/>YKL139W(CTK1) 0.015 4965 1263<br/>YJR060W(CBF1) -0.052 2504 3724<br/>YOR158W(PET123) -0.120 665 5563<br/>YAL002W(VPS8) -0.131 548 5680<br/>YHR013C(ARD1) 0.003 5998 230<br/>YER017C(AFG3) 0.108 859 5369<br/>YDR484W(VPS52) 0.047 2730 3498<br/>YGR104C(SRB5) -0.042 3041 3187<br/>YDR137W(RGP1) -0.058 2194 4034<br/>YJL006C(CTK2) -0.007 5641 587<br/>YFR010W(UBP6) -0.031 3742 2486<br/>YOL004W(SIN3) 0.072 1651 4577<br/>YJL029C(VPS53) 0.006 5733 495<br/>YGL071W(AFT1) -0.020 4547 1681<br/>YLR085C(ARP6) -0.018 4727 1501<br/>YJL124C(LSM1) -0.088 1222 5006<br/>YOL012C(HTZ1) -0.051 2555 3673<br/>YNL250W(RAD50) 0.056 2284 3944<br/>YGL043W(DST1) -0.004 5912 316<br/>YGL163C(RAD54) 0.105 903 5325<br/>YIL040W(APQ12) 0.051 2555 3673<br/>YLR396C(VPS33) 0.013 5149 1079<br/>YIL084C(SDS3) 0.005 5827 401<br/>YNL297C(MON2) 0.001 6188 40<br/>YDR004W(RAD57) 0.003 5998 230<br/>YDR076W(RAD55) 0.034 3544 2684<br/>YGL127C(SOH1) 0.006 5733 495<br/>YMR231W(PEP5) 0.048 2675 3553<br/>YHR090C(YNG2) -0.017 4812 1416<br/>YKL212W(SAC1) 0.023 4343 1885<br/>YOR147W(MDM32) 0.102 950 5278<br/>YMR263W(SAP30) -0.058 2194 4034<br/>YNL215W(IES2) 0.053 2451 3777<br/>YLR337C(VRP1) 0.111 799 5429<br/>YLR039C(RIC1) 0.026 4110 2118<br/>YGL070C(RPB9) -0.046 2789 3439<br/>YHR194W(MDM31) 0.017 4812 1416<br/>YLR384C(IKI3) 0.101 976 5252<br/>YLR055C(SPT8) 0.086 1282 4946<br/>YKR020W(VPS51) 0.038 3283 2945<br/>YDR334W(SWR1) -0.041 3107 3121<br/>YDL048C(STP4) -0.084 1325 4903<br/>YOR297C(TIM18) -0.057 2234 3994<br/>YAL024C(LTE1) 0.034 3545 2683<br/>YER095W(RAD51) -0.043 2978 3250<br/>YGR285C(ZUO1) 0.045 2825 3403<br/>YDR359C(EAF1) 0.011 5319 909<br/>YMR116C(ASC1) 0.037 3348 2880<br/>YBR231C(SWC5) 0.039 3215 3013<br/>YGR200C(ELP2) 0.077 1503 4725<br/>YDR323C(PEP7) -0.047 2730 3498<br/>YLR148W(PEP3) -0.059 2147 4081<br/>YNL107W(YAF9) -0.064 1949 4279<br/>YPL213W(LEA1) -0.013 5149 1079<br/>YML032C(RAD52) -0.017 4812 1416<br/>YDR363W-A(SEM1) 0.017 4812 1416<br/>YER111C(SWI4) -0.051 2555 3673<br/>YNL330C(RPD3) 0.092 1135 5093<br/>YML041C(VPS71) -0.067 1837 4391<br/><u>YJR104C</u>(<u>SOD1</u>) -1.419 1 6227<br/>YML028W(TSA1) 0.116 731 5497<br/>YGR135W(PRE9) -0.001 6188 40<br/>YHR200W(RPN10) 0.037 3348 2880<br/>YNL199C(GCR2) 0.013 5149 1079<br/>YHR041C(SRB2) 0.024 4274 1954<br/>YJL168C(SET2) -0.037 3348 2880<br/>YOL009C(MDM12) -0.000 6228 0<br/>YMR312W(ELP6) 0.058 2194 4034<br/>YFL023W(BUD27) 0.084 1325 4903<br/>YCR024C(SLM5) -0.036 3409 2819<br/>YLR262C(YPT6) 0.028 3951 2277<br/>YDR485C(VPS72) 0.024 4274 1954<br/>YLR182W(SWI6) -0.086 1282 4946<br/>YMR224C(MRE11) 0.013 5149 1079<br/>YML112W(CTK3) 0.028 3951 2277<br/>YDR432W(NPL3) -0.070 1727 4501<br/>YMR165C(PAH1) 0.147 406 5822<br/>YPL101W(ELP4) 0.010 5404 824<br/>YIR009W(MSL1) -0.004 5912 316<br/>YKL155C(RSM22) -0.026 4110 2118<br/>YDR207C(UME6) -0.069 1758 4470<br/>YDR369C(XRS2) 0.012 5240 988<br/>YBR095C(RXT2) -0.001 6188 40<br/>YKL113C(RAD27) -0.002 6091 137<br/>YDL101C(DUN1) 0.012 5240 988<br/>YEL044W(IES6) 0.126 602 5626<br/>YGL095C(VPS45) -0.058 2194 4034<br/><br/><br/>ES Random Genesets = [0.27717684809044085] ES Random KOs = [0.27717684809044085] ES Random Genesets = [0.59430958390639954] ES Random KOs = [0.59430958390639954]<br/><br/>p Random Genesets = 0.76 p Random KOs = 0.69 p Random Genesets = 0.3 p Random KOs = 0.19 ES Pruned Random Genesets =[0.59430958390639954]p Pruned Random Genesets = 0.29 ES Pruned Random KOs =[0.59430958390639954] p Pruned Random KOs = 0.25<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YLR182W (SWI6)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6272<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.053 3862 2410 <span style='background:yellow;'>YDL074C(BRE1) -0.221 5631 641</span><br/>YNL097C(PHO23) -0.005 6066 206 YGL058W(RAD6) -0.058 2644 3628<br/>YER151C(UBP3) 0.058 3654 2618 <span style='background:yellow;'>YPL055C(LGE1) 0.091 3744 2528</span><br/>YJL115W(ASF1) 0.180 955 5317<br/>YDR392W(SPT3) -0.127 1687 4585<br/>YPL086C(ELP3) -0.137 1503 4769<br/>YAL011W(SWC3) 0.032 4768 1504<br/>YKL139W(CTK1) -0.107 2146 4126<br/>YJR060W(CBF1) -0.314 298 5974<br/>YOR158W(PET123) -0.059 3626 2646<br/>YAL002W(VPS8) 0.067 3340 2932<br/>YHR013C(ARD1) 0.048 4100 2172<br/>YER017C(AFG3) 0.136 1516 4756<br/>YDR484W(VPS52) 0.086 2699 3573<br/>YGR104C(SRB5) -0.151 1292 4980<br/>YDR137W(RGP1) -0.121 1806 4466<br/>YJL006C(CTK2) -0.048 4100 2172<br/>YFR010W(UBP6) 0.007 5959 313<br/>YOL004W(SIN3) -0.037 4549 1723<br/>YJL029C(VPS53) -0.037 4549 1723<br/>YGL071W(AFT1) 0.064 3461 2811<br/>YLR085C(ARP6) -0.018 5395 877<br/>YJL124C(LSM1) -0.019 5339 933<br/>YOL012C(HTZ1) -0.078 2952 3320<br/>YNL250W(RAD50) -0.118 1861 4411<br/>YGL043W(DST1) -0.075 3062 3210<br/>YGL163C(RAD54) 0.276 390 5882<br/>YIL040W(APQ12) 0.062 3529 2743<br/>YLR396C(VPS33) -0.217 666 5606<br/>YIL084C(SDS3) -0.141 1440 4832<br/>YNL297C(MON2) -0.034 4677 1595<br/>YDR004W(RAD57) -0.113 1985 4287<br/>YDR076W(RAD55) 0.262 439 5833<br/>YGL127C(SOH1) -0.084 2757 3515<br/>YMR231W(PEP5) -0.350 244 6028<br/>YHR090C(YNG2) -0.108 2119 4153<br/>YKL212W(SAC1) 0.044 4270 2002<br/>YOR147W(MDM32) 0.102 2272 4000<br/>YMR263W(SAP30) 0.039 4458 1814<br/>YNL215W(IES2) -0.049 4057 2215<br/>YLR337C(VRP1) 0.153 1259 5013<br/>YLR039C(RIC1) 0.035 4634 1638<br/>YGL070C(RPB9) -0.133 1581 4691<br/>YHR194W(MDM31) 0.090 2573 3699<br/>YLR384C(IKI3) 0.089 2603 3669<br/>YLR055C(SPT8) -0.007 5959 313<br/>YKR020W(VPS51) -0.051 3964 2308<br/>YDR334W(SWR1) -0.137 1503 4769<br/>YDL048C(STP4) 0.361 226 6046<br/>YOR297C(TIM18) 0.003 6148 124<br/>YAL024C(LTE1) 0.030 4850 1422<br/>YER095W(RAD51) 0.440 152 6120<br/>YGR285C(ZUO1) -0.043 4309 1963<br/>YDR359C(EAF1) 0.221 645 5627<br/>YMR116C(ASC1) -0.139 1468 4804<br/>YBR231C(SWC5) 0.026 5029 1243<br/>YGR200C(ELP2) -0.109 2086 4186<br/>YDR323C(PEP7) -0.175 999 5273<br/>YLR148W(PEP3) -0.080 2889 3383<br/>YNL107W(YAF9) -0.054 3823 2449<br/>YPL213W(LEA1) -0.005 6066 206<br/>YML032C(RAD52) -0.062 3529 2743<br/>YDR363W-A(SEM1) NaN N/A N/A<br/>YER111C(SWI4) 0.074 3109 3163<br/>YNL330C(RPD3) -0.161 1157 5115<br/>YML041C(VPS71) -0.095 2444 3828<br/>YJR104C(SOD1) 0.148 1335 4937<br/>YML028W(TSA1) 0.152 1276 4996<br/>YGR135W(PRE9) 0.041 4374 1898<br/>YHR200W(RPN10) -0.010 5813 459<br/>YNL199C(GCR2) -0.069 3278 2994<br/>YHR041C(SRB2) 0.059 3626 2646<br/>YJL168C(SET2) -0.307 315 5957<br/>YOL009C(MDM12) 0.129 1652 4620<br/>YMR312W(ELP6) 0.063 3496 2776<br/>YFL023W(BUD27) -0.008 5905 367<br/>YCR024C(SLM5) 0.285 360 5912<br/>YLR262C(YPT6) -0.016 5497 775<br/>YDR485C(VPS72) -0.008 5905 367<br/><u>YLR182W</u>(<u>SWI6</u>) -0.817 49 6223<br/>YMR224C(MRE11) 0.116 1912 4360<br/>YML112W(CTK3) 0.083 2783 3489<br/>YDR432W(NPL3) -0.007 5959 313<br/>YMR165C(PAH1) 0.030 4849 1423<br/>YPL101W(ELP4) -0.117 1889 4383<br/>YIR009W(MSL1) 0.087 2662 3610<br/>YKL155C(RSM22) -0.178 973 5299<br/>YDR207C(UME6) -0.054 3823 2449<br/>YDR369C(XRS2) -0.036 4584 1688<br/>YBR095C(RXT2) -0.093 2497 3775<br/>YKL113C(RAD27) -0.006 6013 259<br/>YDL101C(DUN1) 0.169 1064 5208<br/>YEL044W(IES6) -0.030 4849 1423<br/>YGL095C(VPS45) -0.056 3739 2533<br/><br/><br/>ES Random Genesets = [0.26775240935785483] ES Random KOs = [0.26775240935785483] ES Random Genesets = [0.42155612244897955] ES Random KOs = [0.42155612244897955]<br/><br/>p Random Genesets = 0.7 p Random KOs = 0.76 p Random Genesets = 0.61 p Random KOs = 0.68 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YKL113C (RAD27)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6227<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.178 100 6127 YDL074C(BRE1) -0.011 1405 4822<br/>YNL097C(PHO23) 0.044 1943 4284 <span style='background:yellow;'>YGL058W(RAD6) -0.039 4037 2190</span><br/>YER151C(UBP3) -0.021 3813 2414 <span style='background:yellow;'>YPL055C(LGE1) 0.045 4397 1830</span><br/>YJL115W(ASF1) 0.029 3076 3151<br/>YDR392W(SPT3) -0.005 5670 557<br/>YPL086C(ELP3) 0.061 1151 5076<br/>YAL011W(SWC3) -0.036 2485 3742<br/>YKL139W(CTK1) 0.042 2067 4160<br/>YJR060W(CBF1) 0.014 4586 1641<br/>YOR158W(PET123) -0.000 6227 0<br/>YAL002W(VPS8) -0.031 2903 3324<br/>YHR013C(ARD1) -0.011 4943 1284<br/>YER017C(AFG3) 0.018 4149 2078<br/>YDR484W(VPS52) -0.012 4820 1407<br/>YGR104C(SRB5) 0.043 2000 4227<br/>YDR137W(RGP1) -0.013 4695 1532<br/>YJL006C(CTK2) 0.044 1943 4284<br/>YFR010W(UBP6) 0.008 5316 911<br/>YOL004W(SIN3) -0.015 4494 1733<br/>YJL029C(VPS53) -0.009 5211 1016<br/>YGL071W(AFT1) -0.040 2188 4039<br/>YLR085C(ARP6) -0.006 5553 674<br/>YJL124C(LSM1) -0.023 3623 2604<br/>YOL012C(HTZ1) -0.005 5670 557<br/>YNL250W(RAD50) 0.052 1525 4702<br/>YGL043W(DST1) 0.009 5211 1016<br/>YGL163C(RAD54) 0.008 5316 911<br/>YIL040W(APQ12) 0.010 5074 1153<br/>YLR396C(VPS33) -0.019 4029 2198<br/>YIL084C(SDS3) 0.016 4377 1850<br/>YNL297C(MON2) -0.028 3163 3064<br/>YDR004W(RAD57) 0.029 3076 3151<br/>YDR076W(RAD55) -0.007 5431 796<br/>YGL127C(SOH1) -0.012 4820 1407<br/>YMR231W(PEP5) -0.021 3813 2414<br/>YHR090C(YNG2) 0.000 6227 0<br/>YKL212W(SAC1) -0.023 3623 2604<br/>YOR147W(MDM32) 0.047 1770 4457<br/>YMR263W(SAP30) 0.030 2993 3234<br/>YNL215W(IES2) -0.030 2993 3234<br/>YLR337C(VRP1) 0.018 4149 2078<br/>YLR039C(RIC1) 0.005 5670 557<br/>YGL070C(RPB9) 0.041 2129 4098<br/>YHR194W(MDM31) 0.012 4820 1407<br/>YLR384C(IKI3) -0.002 6047 180<br/>YLR055C(SPT8) -0.018 4149 2078<br/>YKR020W(VPS51) -0.008 5316 911<br/>YDR334W(SWR1) 0.026 3339 2888<br/>YDL048C(STP4) -0.078 679 5548<br/>YOR297C(TIM18) -0.027 3252 2975<br/>YAL024C(LTE1) -0.092 454 5773<br/>YER095W(RAD51) 0.014 4586 1641<br/>YGR285C(ZUO1) -0.013 4695 1532<br/>YDR359C(EAF1) 0.014 4586 1641<br/>YMR116C(ASC1) -0.010 5074 1153<br/>YBR231C(SWC5) 0.018 4149 2078<br/>YGR200C(ELP2) 0.017 4251 1976<br/>YDR323C(PEP7) 0.005 5670 557<br/>YLR148W(PEP3) 0.023 3623 2604<br/>YNL107W(YAF9) 0.031 2903 3324<br/>YPL213W(LEA1) 0.081 621 5606<br/>YML032C(RAD52) 0.026 3339 2888<br/>YDR363W-A(SEM1) -0.081 621 5606<br/>YER111C(SWI4) 0.025 3433 2794<br/>YNL330C(RPD3) -0.047 1770 4457<br/>YML041C(VPS71) 0.045 1885 4342<br/>YJR104C(SOD1) 0.021 3813 2414<br/>YML028W(TSA1) 0.034 2634 3593<br/>YGR135W(PRE9) -0.009 5211 1016<br/>YHR200W(RPN10) -0.036 2484 3743<br/>YNL199C(GCR2) 0.030 2993 3234<br/>YHR041C(SRB2) -0.041 2129 4098<br/>YJL168C(SET2) -0.054 1431 4796<br/>YOL009C(MDM12) 0.027 3252 2975<br/>YMR312W(ELP6) -0.021 3813 2414<br/>YFL023W(BUD27) 0.042 2067 4160<br/>YCR024C(SLM5) -0.131 197 6030<br/>YLR262C(YPT6) -0.010 5074 1153<br/>YDR485C(VPS72) 0.039 2247 3980<br/>YLR182W(SWI6) 0.006 5553 674<br/>YMR224C(MRE11) 0.029 3076 3151<br/>YML112W(CTK3) 0.060 1191 5036<br/>YDR432W(NPL3) -0.018 4149 2078<br/>YMR165C(PAH1) 0.033 2709 3518<br/>YPL101W(ELP4) 0.027 3252 2975<br/>YIR009W(MSL1) 0.021 3813 2414<br/>YKL155C(RSM22) 0.035 2571 3656<br/>YDR207C(UME6) 0.011 4943 1284<br/>YDR369C(XRS2) -0.293 37 6190<br/>YBR095C(RXT2) 0.002 6047 180<br/><u>YKL113C</u>(<u>RAD27</u>) -0.188 90 6137<br/>YDL101C(DUN1) -0.002 6047 180<br/>YEL044W(IES6) 0.055 1382 4845<br/>YGL095C(VPS45) -0.033 2709 3518<br/><br/><br/>ES Random Genesets = [0.20472634129145462] ES Random KOs = [0.20472634129145462] ES Random Genesets = [0.50550670027037037] ES Random KOs = [0.50550670027037037]<br/><br/>p Random Genesets = 0.72 p Random KOs = 0.76 p Random Genesets = 0.48 p Random KOs = 0.45 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> -----Knockout Gene:YEL044W (IES6)-----<br/><br/>The length of the pathway opposite the knockout: 3<br/><br/>The length of the list of log10 values: 6327<br/><br/><pre>Pathway 1 log10 # After # Before Pathway 2 log10 # After # Before<br/><br/> YDL020C(RPN4) 0.023 5133 1194 <span style='background:yellow;'>YDL074C(BRE1) -0.079 3565 2762</span><br/>YNL097C(PHO23) 0.094 2308 4019 YGL058W(RAD6) 0.022 1192 5135<br/>YER151C(UBP3) 0.035 4575 1752 YPL055C(LGE1) -0.037 1912 4415<br/>YJL115W(ASF1) 0.030 4791 1536<br/>YDR392W(SPT3) 0.103 2060 4267<br/>YPL086C(ELP3) -0.092 2363 3964<br/>YAL011W(SWC3) -0.067 3206 3121<br/>YKL139W(CTK1) 0.063 3364 2963<br/>YJR060W(CBF1) -0.088 2479 3848<br/>YOR158W(PET123) -0.024 5083 1244<br/>YAL002W(VPS8) -0.020 5289 1038<br/>YHR013C(ARD1) 0.008 5920 407<br/>YER017C(AFG3) 0.089 2457 3870<br/>YDR484W(VPS52) 0.097 2228 4099<br/>YGR104C(SRB5) -0.042 4232 2095<br/>YDR137W(RGP1) 0.094 2308 4019<br/>YJL006C(CTK2) -0.085 2585 3742<br/>YFR010W(UBP6) 0.038 4413 1914<br/>YOL004W(SIN3) 0.124 1602 4725<br/>YJL029C(VPS53) -0.027 4940 1387<br/>YGL071W(AFT1) -0.023 5133 1194<br/>YLR085C(ARP6) -0.089 2457 3870<br/>YJL124C(LSM1) -0.201 640 5687<br/>YOL012C(HTZ1) 0.112 1857 4470<br/>YNL250W(RAD50) 0.018 5407 920<br/>YGL043W(DST1) -0.078 2840 3487<br/>YGL163C(RAD54) 0.044 4124 2203<br/>YIL040W(APQ12) -0.241 418 5909<br/>YLR396C(VPS33) -0.035 4575 1752<br/>YIL084C(SDS3) -0.001 6293 34<br/>YNL297C(MON2) -0.023 5133 1194<br/>YDR004W(RAD57) -0.015 5547 780<br/>YDR076W(RAD55) 0.058 3572 2755<br/>YGL127C(SOH1) -0.185 757 5570<br/>YMR231W(PEP5) 0.035 4575 1752<br/>YHR090C(YNG2) 0.041 4283 2044<br/>YKL212W(SAC1) -0.061 3446 2881<br/>YOR147W(MDM32) 0.079 2801 3526<br/>YMR263W(SAP30) 0.115 1786 4541<br/>YNL215W(IES2) 0.273 318 6009<br/>YLR337C(VRP1) -0.090 2418 3909<br/>YLR039C(RIC1) 0.163 961 5366<br/>YGL070C(RPB9) 0.042 4232 2095<br/>YHR194W(MDM31) 0.096 2257 4070<br/>YLR384C(IKI3) -0.079 2801 3526<br/>YLR055C(SPT8) 0.183 774 5553<br/>YKR020W(VPS51) -0.115 1786 4541<br/>YDR334W(SWR1) 0.080 2760 3567<br/>YDL048C(STP4) 0.613 26 6301<br/>YOR297C(TIM18) 0.037 4476 1851<br/>YAL024C(LTE1) -0.030 4791 1536<br/>YER095W(RAD51) -0.158 1025 5302<br/>YGR285C(ZUO1) 0.005 6072 255<br/>YDR359C(EAF1) 0.138 1327 5000<br/>YMR116C(ASC1) -0.101 2114 4213<br/>YBR231C(SWC5) 0.042 4232 2095<br/>YGR200C(ELP2) 0.081 2725 3602<br/>YDR323C(PEP7) -0.094 2308 4019<br/>YLR148W(PEP3) 0.031 4748 1579<br/>YNL107W(YAF9) 0.225 497 5830<br/>YPL213W(LEA1) 0.038 4413 1914<br/>YML032C(RAD52) 0.005 6072 255<br/>YDR363W-A(SEM1) -0.015 5547 780<br/>YER111C(SWI4) -0.009 5871 456<br/>YNL330C(RPD3) 0.099 2164 4163<br/>YML041C(VPS71) 0.175 843 5484<br/>YJR104C(SOD1) -0.005 6072 255<br/>YML028W(TSA1) -0.141 1273 5054<br/>YGR135W(PRE9) -0.007 5963 364<br/>YHR200W(RPN10) 0.041 4283 2044<br/>YNL199C(GCR2) 0.052 3806 2521<br/>YHR041C(SRB2) 0.105 2008 4319<br/>YJL168C(SET2) -0.113 1834 4493<br/>YOL009C(MDM12) -0.089 2457 3870<br/>YMR312W(ELP6) -0.004 6136 191<br/>YFL023W(BUD27) 0.097 2228 4099<br/>YCR024C(SLM5) 0.082 2689 3638<br/>YLR262C(YPT6) -0.003 6181 146<br/>YDR485C(VPS72) 0.144 1223 5104<br/>YLR182W(SWI6) -0.009 5871 456<br/>YMR224C(MRE11) 0.058 3572 2755<br/>YML112W(CTK3) 0.123 1621 4706<br/>YDR432W(NPL3) -0.014 5608 719<br/>YMR165C(PAH1) 0.150 1129 5198<br/>YPL101W(ELP4) -0.210 579 5748<br/>YIR009W(MSL1) -0.089 2457 3870<br/>YKL155C(RSM22) 0.060 3486 2841<br/>YDR207C(UME6) -0.123 1621 4706<br/>YDR369C(XRS2) 0.021 5240 1087<br/>YBR095C(RXT2) 0.055 3696 2631<br/>YKL113C(RAD27) -0.022 5197 1130<br/>YDL101C(DUN1) -0.177 827 5500<br/><u>YEL044W</u>(<u>IES6</u>) -0.702 16 6311<br/>YGL095C(VPS45) 0.120 1680 4647<br/><br/><br/>ES Random Genesets = [0.32009595149346481] ES Random KOs = [0.32009595149346481] ES Random Genesets = [-0.4365418049628576] ES Random KOs = [-0.4365418049628576]<br/><br/>p Random Genesets = 0.75 p Random KOs = 0.75 p Random Genesets = 0.8 p Random KOs = 0.82 ES Pruned Random Genesets =N/Ap Pruned Random Genesets = N/A ES Pruned Random KOs =N/A p Pruned Random KOs = N/A<br/><br/><hr/><br/></pre><br/> </p>