Genes in this set(3):

     Std. name     Sys. name     SGDID
     MMS4     YBR098W     S000000302
     MUS81     YDR386W     S000002794
     TOP1     YOL006C     S000005366

Enriched GO terms in this set:

GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."

    GO:0009987 (cellular process)
    "Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."

        GO:0044237 (cellular metabolic process)
        "The chemical reactions and pathways by which individual cells transform chemical substances."

            GO:0006139 (nucleobase, nucleoside, nucleotide and nucleic acid metabolic process)
            "The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids."

                GO:0006259 (DNA metabolic process)
                "The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides."

                    GO:0006265 (DNA topological change) [p < 0.001   (3/4: MMS4; MUS81; TOP1)]
                    "The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number."

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GO:0003674 (molecular_function)
"Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions."

    GO:0003824 (catalytic activity)
    "Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic."

        GO:0016787 (hydrolase activity)
        "Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3."

            GO:0016788 (hydrolase activity, acting on ester bonds)
            "Catalysis of the hydrolysis of any ester bond."

                GO:0004518 (nuclease activity)
                "Catalysis of the hydrolysis of ester linkages within nucleic acids."

                    GO:0004519 (endonuclease activity)
                    "Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks."

                        GO:0016894 (endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters) [p = 0.002   (2/2: MMS4; MUS81)]
                        "Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 3'-phosphomonoesters."

                            GO:0016889 (endodeoxyribonuclease activity, producing 3'-phosphomonoesters) [p = 0.002   (2/2: MMS4; MUS81)]
                            "Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 3'-phosphomonoesters."

                                GO:0008821 (crossover junction endodeoxyribonuclease activity) [p = 0.002   (2/2: MMS4; MUS81)]
                                "Catalysis of the endonucleolytic cleavage at a junction such as a reciprocal single-stranded crossover between two homologous DNA duplexes (Holliday junction)."

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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."

    GO:0032991 (macromolecular complex)
    "A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together."

        GO:0043234 (protein complex)
        "Any protein group composed of two or more subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleic acids, metal ions or carbohydrate groups."

            GO:0048476 (Holliday junction resolvase complex) [p = 0.002   (2/2: MMS4; MUS81)]
            "A protein complex that mediates the conversion of a Holliday junction into two separate duplex DNA molecules; the complex includes a single- or multisubunit helicase that catalyzes the extension of heteroduplex DNA by branch migration and a nuclease that resolves the junction by nucleolytic cleavage."

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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."

    GO:0009987 (cellular process)
    "Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."

        GO:0044237 (cellular metabolic process)
        "The chemical reactions and pathways by which individual cells transform chemical substances."

            GO:0006139 (nucleobase, nucleoside, nucleotide and nucleic acid metabolic process)
            "The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids."

                GO:0006259 (DNA metabolic process)
                "The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides."

                    GO:0006310 (DNA recombination) [p = 0.010   (3/36: MMS4; MUS81; TOP1)]
                    "The processes by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction."

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