Genes in this set(7):

Std. name	Sys. name	SGDID
DEP1	YAL013W	S000000011
GIM4	YEL003W	S000000729
SET2	YJL168C	S000003704
CDC73	YLR418C	S000004410
TUB3	YML124C	S000004593
SAP30	YMR263W	S000004876
CTI6	YPL181W	S000006102

Enriched GO terms in this set:

GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."

    GO:0009987 (cellular process)
    "Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."

        GO:0016043 (cellular component organization and biogenesis)
        "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component; includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope."

            GO:0006996 (organelle organization and biogenesis)
            "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell."

                GO:0051276 (chromosome organization and biogenesis)
                "A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information."

                    GO:0006325 (establishment and/or maintenance of chromatin architecture)
                    "The specification, formation and maintenance of the physical structure of eukaryotic chromatin."

                        GO:0016568 (chromatin modification) [p = 0.005   (5/61: DEP1; SET2; CDC73; SAP30; CTI6)]
                        "The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure."

                            GO:0016569 (covalent chromatin modification) [p = 0.002   (5/35: DEP1; SET2; CDC73; SAP30; CTI6)]
                            "The alteration of DNA or protein in chromatin by the covalent addition or removal of chemical groups."

                                GO:0016570 (histone modification) [p = 0.002   (5/35: DEP1; SET2; CDC73; SAP30; CTI6)]
                                "The covalent alteration of one or more amino acid residues within a histone protein."

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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."

    GO:0044422 (organelle part)
    "Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."

        GO:0044446 (intracellular organelle part)
        "A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."

            GO:0044428 (nuclear part)
            "Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."

                GO:0044451 (nucleoplasm part)
                "Any constituent part of the nucleoplasm, that part of the nuclear content other than the chromosomes or the nucleolus."

                    GO:0005667 (transcription factor complex)
                    "Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription."

                        GO:0000118 (histone deacetylase complex)
                        "Complex that possesses histone deacetylase activity."

                            GO:0000508 (Rpd3L complex) [p = 0.003   (3/8: DEP1; SAP30; CTI6)]
                            "A multisubunit histone deacetylase complex that is involved in transcriptional regulation. In S. cerevisiae, this complex consists of Rpd3p, Sin3p, Ume1p, Pho23p, Sap30p, Sds3p, Cti6p, Rxt2p, Rxt3p, Dep1p, Ume6p and Ash1p."

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