Genes in this set(91):
| Std. name | Sys. name | SGDID |
| VPS8 | YAL002W | S000000002 |
| FUN30 | YAL019W | S000000017 |
| BUD14 | YAR014C | S000000069 |
| SFT2 | YBL102W | S000000198 |
| APM3 | YBR288C | S000000492 |
| RER1 | YCL001W | S000000507 |
| MAK31 | YCR020C-A | S000000614 |
| RAD18 | YCR066W | S000000662 |
| | YEL043W | S000000769 |
| VMA8 | YEL051W | S000000777 |
| MAK10 | YEL053C | S000000779 |
| NPR2 | YEL062W | S000000788 |
| | YER084W | S000000886 |
| SCS2 | YER120W | S000000922 |
| GLO3 | YER122C | S000000924 |
| RAD4 | YER162C | S000000964 |
| OPI1 | YHL020C | S000001012 |
| GOS1 | YHL031C | S000001023 |
| NEM1 | YHR004C | S000001046 |
| VMA22 | YHR060W | S000001102 |
| TED1 | YIL039W | S000001301 |
| SEC28 | YIL076W | S000001338 |
| TEF4 | YKL081W | S000001564 |
| IRS4 | YKR019C | S000001727 |
| GMH1 | YKR030W | S000001738 |
| RPL40B | YKR094C | S000001802 |
| RIM15 | YFL033C | S000001861 |
| VMA10 | YHR039C-A | S000002100 |
| RPL2A | YFR031C-A | S000002104 |
| BRE1 | YDL074C | S000002232 |
| GET3 | YDL100C | S000002258 |
| VPS41 | YDR080W | S000002487 |
| | YDR107C | S000002514 |
| ENT5 | YDR153C | S000002560 |
| RAV2 | YDR202C | S000002610 |
| | YDR203W | S000002611 |
| SWA2 | YDR320C | S000002728 |
| VPS74 | YDR372C | S000002780 |
| GET1 | YGL020C | S000002988 |
| ERV14 | YGL054C | S000003022 |
| SNF4 | YGL115W | S000003083 |
| VAM7 | YGL212W | S000003180 |
| VMA7 | YGR020C | S000003252 |
| VMA21 | YGR105W | S000003337 |
| APL6 | YGR261C | S000003493 |
| PEP8 | YJL053W | S000003589 |
| | YJL123C | S000003659 |
| RAV1 | YJR033C | S000003794 |
| GEF1 | YJR040W | S000003801 |
| CBF1 | YJR060W | S000003821 |
| ENT4 | YLL038C | S000003961 |
| BRE2 | YLR015W | S000004005 |
| EMP70 | YLR083C | S000004073 |
| IMH1 | YLR309C | S000004300 |
| EST2 | YLR318W | S000004310 |
| DCR2 | YLR361C | S000004353 |
| YMD8 | YML038C | S000004502 |
| MVP1 | YMR004W | S000004606 |
| | YMR010W | S000004612 |
| STV1 | YMR054W | S000004658 |
| PKR1 | YMR123W | S000004730 |
| RSN1 | YMR266W | S000004879 |
| RPL16B | YNL069C | S000005013 |
| MLS1 | YNL117W | S000005061 |
| EAF7 | YNL136W | S000005080 |
| PSD1 | YNL169C | S000005113 |
| MID1 | YNL291C | S000005235 |
| | YNL296W | S000005240 |
| MON2 | YNL297C | S000005241 |
| TRF5 | YNL299W | S000005243 |
| PPG1 | YNR032W | S000005315 |
| ESC8 | YOL017W | S000005377 |
| TLG2 | YOL018C | S000005378 |
| VAM10 | YOR068C | S000005594 |
| VPS5 | YOR069W | S000005595 |
| VPS21 | YOR089C | S000005615 |
| INP53 | YOR109W | S000005635 |
| CEX1 | YOR112W | S000005638 |
| VPS17 | YOR132W | S000005658 |
| EGD1 | YPL037C | S000005958 |
| LGE1 | YPL055C | S000005976 |
| SYH1 | YPL105C | S000006026 |
| VPS30 | YPL120W | S000006041 |
| APL5 | YPL195W | S000006116 |
| OXR1 | YPL196W | S000006117 |
| TFP3 | YPL234C | S000006155 |
| DSS4 | YPR017C | S000006221 |
| | YPR050C | S000006254 |
| MAK3 | YPR051W | S000006255 |
| | YPR084W | S000006288 |
| | YPR197C | S000006401 |
Enriched GO terms in this set:
GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044464 (cell part)
"Any constituent part of a cell, the basic structural and functional unit of all organisms."
GO:0044424 (intracellular part)
"Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."
GO:0044444 (cytoplasmic part) [p = 0.001 (60/309: VPS8; FUN30; SFT2; APM3; RER1; MAK31; [YEL043W]; VMA8; MAK10; SCS2; GLO3; OPI1; NEM1; VMA22; TED1; SEC28; TEF4; IRS4; GMH1; RPL40B; VMA10; RPL2A; GET3; VPS41; ENT5; RAV2; SWA2; GET1; ERV14; VAM7; VMA7; VMA21; APL6; PEP8; [YJL123C]; RAV1; GEF1; CBF1; ENT4; EMP70; IMH1; STV1; PKR1; RPL16B; MLS1; PSD1; MID1; MON2; TLG2; VAM10; VPS5; VPS21; INP53; VPS17; EGD1; SYH1; APL5; OXR1; TFP3; MAK3)]
"Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."
GO:0005768 (endosome) [p = 0.002 (12/23: VPS8; VPS41; ENT5; PEP8; GEF1; EMP70; STV1; MON2; TLG2; VPS5; VPS21; VPS17)]
"A membrane-bound organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation."
---
GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044464 (cell part)
"Any constituent part of a cell, the basic structural and functional unit of all organisms."
GO:0044424 (intracellular part)
"Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."
GO:0044444 (cytoplasmic part) [p = 0.001 (60/309: VPS8; FUN30; SFT2; APM3; RER1; MAK31; [YEL043W]; VMA8; MAK10; SCS2; GLO3; OPI1; NEM1; VMA22; TED1; SEC28; TEF4; IRS4; GMH1; RPL40B; VMA10; RPL2A; GET3; VPS41; ENT5; RAV2; SWA2; GET1; ERV14; VAM7; VMA7; VMA21; APL6; PEP8; [YJL123C]; RAV1; GEF1; CBF1; ENT4; EMP70; IMH1; STV1; PKR1; RPL16B; MLS1; PSD1; MID1; MON2; TLG2; VAM10; VPS5; VPS21; INP53; VPS17; EGD1; SYH1; APL5; OXR1; TFP3; MAK3)]
"Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."
GO:0030117 (membrane coat) [p = 0.003 (6/7: APM3; GLO3; SEC28; ENT5; APL6; APL5)]
"Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules."
---
GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044464 (cell part)
"Any constituent part of a cell, the basic structural and functional unit of all organisms."
GO:0016020 (membrane) [p = 0.002 (35/146: SFT2; APM3; VMA8; SCS2; GLO3; OPI1; GOS1; NEM1; VMA22; SEC28; GMH1; VMA10; VPS41; ENT5; SWA2; ERV14; SNF4; VAM7; VMA7; VMA21; APL6; PEP8; RAV1; STV1; PKR1; RSN1; PSD1; MID1; MON2; VAM10; VPS5; VPS21; VPS17; APL5; TFP3)]
"Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins."
GO:0048475 (coated membrane) [p = 0.003 (6/7: APM3; GLO3; SEC28; ENT5; APL6; APL5)]
"A single or double lipid bilayer with any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes."
---
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0009987 (cellular process)
"Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0016043 (cellular component organization and biogenesis)
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component; includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope."
GO:0006996 (organelle organization and biogenesis)
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell."
GO:0007033 (vacuole organization and biogenesis) [p = 0.003 (11/23: VMA8; VMA22; VMA10; VPS41; RAV2; VAM7; VMA7; RAV1; STV1; VAM10; TFP3)]
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vacuole."
---
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0051234 (establishment of localization)
"The directed movement of a cell, substance or cellular entity, such as a protein complex or organelle, to a specific location."
GO:0006810 (transport)
"The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells."
GO:0016192 (vesicle-mediated transport) [p = 0.002 (25/89: VPS8; SFT2; APM3; RER1; GLO3; GOS1; SEC28; GET3; ENT5; GET1; ERV14; VAM7; APL6; PEP8; RAV1; ENT4; IMH1; RSN1; MON2; TLG2; VPS5; VPS21; INP53; VPS17; APL5)]
"The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell."
GO:0048193 (Golgi vesicle transport) [p = 0.006 (16/45: SFT2; APM3; RER1; GLO3; GOS1; SEC28; GET3; ENT5; GET1; ERV14; VAM7; APL6; IMH1; RSN1; MON2; APL5)]
"The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles."
---
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0065007 (biological regulation)
"Any process that modulates the frequency, rate or extent of any biological process, quality or function."
GO:0065008 (regulation of biological quality)
"Any process that modulates the frequency, rate or extent of a biological quality. A biological quality is a measurable attribute of an organism or part of an organism, such as size, mass, shape, color, etc."
GO:0042592 (homeostatic process)
"The biological processes involved in the maintenance of an internal equilibrium."
GO:0048878 (chemical homeostasis)
"The biological processes involved in the maintenance of an internal equilibrium of a chemical."
GO:0050801 (ion homeostasis)
"Any of the processes involved in the maintenance of an internal equilibrium of ions within an organism or cell."
GO:0055080 (cation homeostasis) [p = 0.008 (10/20: VMA8; VMA22; VMA10; RAV2; GET1; VMA7; RAV1; GEF1; STV1; TFP3)]
"The regulation of the levels, transport, and metabolism of cations."
GO:0055067 (monovalent inorganic cation homeostasis)
"The regulation of the levels, transport, and metabolism of monovalent inorganic cations."
GO:0006885 (regulation of pH) [p = 0.008 (8/13: VMA8; VMA22; VMA10; RAV2; VMA7; RAV1; STV1; TFP3)]
"Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion."
GO:0030641 (regulation of cellular pH) [p = 0.008 (8/13: VMA8; VMA22; VMA10; RAV2; VMA7; RAV1; STV1; TFP3)]
"The regulation of the levels, transport, and metabolism of hydrogen ions (protons) within a cell or between a cell and its external environment."
GO:0051453 (regulation of intracellular pH) [p = 0.008 (8/13: VMA8; VMA22; VMA10; RAV2; VMA7; RAV1; STV1; TFP3)]
"Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion."
GO:0051452 (intracellular pH reduction) [p = 0.008 (8/13: VMA8; VMA22; VMA10; RAV2; VMA7; RAV1; STV1; TFP3)]
"Any process that reduces the internal pH of a cell, measured by the concentration of the hydrogen ion."
GO:0007035 (vacuolar acidification) [p = 0.008 (8/13: VMA8; VMA22; VMA10; RAV2; VMA7; RAV1; STV1; TFP3)]
"Any process that reduces the pH of the vacuole, measured by the concentration of the hydrogen ion."
---
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0065007 (biological regulation)
"Any process that modulates the frequency, rate or extent of any biological process, quality or function."
GO:0065008 (regulation of biological quality)
"Any process that modulates the frequency, rate or extent of a biological quality. A biological quality is a measurable attribute of an organism or part of an organism, such as size, mass, shape, color, etc."
GO:0042592 (homeostatic process)
"The biological processes involved in the maintenance of an internal equilibrium."
GO:0048878 (chemical homeostasis)
"The biological processes involved in the maintenance of an internal equilibrium of a chemical."
GO:0050801 (ion homeostasis)
"Any of the processes involved in the maintenance of an internal equilibrium of ions within an organism or cell."
GO:0055080 (cation homeostasis) [p = 0.008 (10/20: VMA8; VMA22; VMA10; RAV2; GET1; VMA7; RAV1; GEF1; STV1; TFP3)]
"The regulation of the levels, transport, and metabolism of cations."
GO:0030003 (cellular cation homeostasis) [p = 0.008 (10/20: VMA8; VMA22; VMA10; RAV2; GET1; VMA7; RAV1; GEF1; STV1; TFP3)]
"The regulation of the levels, transport, and metabolism of cations within a cell or between a cell and its external environment."
---
GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044464 (cell part)
"Any constituent part of a cell, the basic structural and functional unit of all organisms."
GO:0044424 (intracellular part)
"Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."
GO:0005737 (cytoplasm) [p = 0.008 (67/395: VPS8; FUN30; SFT2; APM3; RER1; MAK31; [YEL043W]; VMA8; MAK10; SCS2; GLO3; OPI1; NEM1; VMA22; TED1; SEC28; TEF4; IRS4; GMH1; RPL40B; RIM15; VMA10; RPL2A; GET3; VPS41; ENT5; RAV2; SWA2; VPS74; GET1; ERV14; SNF4; VAM7; VMA7; VMA21; APL6; PEP8; [YJL123C]; RAV1; GEF1; CBF1; ENT4; EMP70; IMH1; MVP1; [YMR010W]; STV1; PKR1; RPL16B; MLS1; PSD1; MID1; MON2; PPG1; TLG2; VAM10; VPS5; VPS21; INP53; CEX1; VPS17; EGD1; SYH1; APL5; OXR1; TFP3; MAK3)]
"All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."
---