Genes in this set(56):
| Std. name | Sys. name | SGDID |
| FUN30 | YAL019W | S000000017 |
| NUP60 | YAR002W | S000000063 |
| SAS3 | YBL052C | S000000148 |
| SIF2 | YBR103W | S000000307 |
| CCZ1 | YBR131W | S000000335 |
| ISW1 | YBR245C | S000000449 |
| SNT1 | YCR033W | S000000629 |
| HCM1 | YCR065W | S000000661 |
| EAF5 | YEL018W | S000000744 |
| PAC2 | YER007W | S000000809 |
| IES5 | YER092W | S000000894 |
| BOI2 | YER114C | S000000916 |
| UBP3 | YER151C | S000000953 |
| SRB2 | YHR041C | S000001083 |
| MTG2 | YHR168W | S000001211 |
| CAP2 | YIL034C | S000001296 |
| HOS4 | YIL112W | S000001374 |
| CAP1 | YKL007W | S000001490 |
| SET3 | YKR029C | S000001737 |
| RPL34A | YER056C-A | S000002135 |
| VPS54 | YDR027C | S000002434 |
| SAC3 | YDR159W | S000002566 |
| EMI1 | YDR512C | S000002920 |
| MON1 | YGL124C | S000003092 |
| HOS2 | YGL194C | S000003162 |
| KIP3 | YGL216W | S000003184 |
| | YGL217C | S000003185 |
| RSC1 | YGR056W | S000003288 |
| RPA34 | YJL148W | S000003684 |
| RPS4A | YJR145C | S000003906 |
| BRE2 | YLR015W | S000004005 |
| IES3 | YLR052W | S000004042 |
| CLB4 | YLR210W | S000004200 |
| CPR6 | YLR216C | S000004206 |
| | YLR217W | S000004207 |
| SEC22 | YLR268W | S000004258 |
| YPT7 | YML001W | S000004460 |
| SRC1 | YML034W | S000004497 |
| TUB3 | YML124C | S000004593 |
| CIN4 | YMR138W | S000004746 |
| EAF7 | YNL136W | S000005080 |
| MCK1 | YNL307C | S000005251 |
| CSE2 | YNR010W | S000005293 |
| BRE5 | YNR051C | S000005334 |
| ESC8 | YOL017W | S000005377 |
| THP1 | YOL072W | S000005433 |
| ASE1 | YOR058C | S000005584 |
| LEO1 | YOR123C | S000005649 |
| | YOR296W | S000005822 |
| CIN1 | YOR349W | S000005876 |
| SPP1 | YPL138C | S000006059 |
| | YPL205C | S000006126 |
| CIN2 | YPL241C | S000006162 |
| KAR9 | YPL269W | S000006190 |
| EAF3 | YPR023C | S000006227 |
| MED1 | YPR070W | S000006274 |
Enriched GO terms in this set:
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0065007 (biological regulation)
"Any process that modulates the frequency, rate or extent of any biological process, quality or function."
GO:0050789 (regulation of biological process)
"Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule."
GO:0050794 (regulation of cellular process)
"Any process that modulates the frequency, rate or extent of cellular processes, those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0051726 (regulation of cell cycle)
"Any process that modulates the rate or extent of progression through the cell cycle."
GO:0040020 (regulation of meiosis) [p = 0.001 (5/10: SIF2; SNT1; HOS4; SET3; HOS2)]
"Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes."
GO:0045835 (negative regulation of meiosis) [p < 0.001 (5/5: SIF2; SNT1; HOS4; SET3; HOS2)]
"Any process that stops, prevents or reduces the frequency, rate or extent of meiosis."
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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part) [p < 0.001 (25/304: NUP60; SAS3; SIF2; ISW1; SNT1; EAF5; SRB2; HOS4; SET3; SAC3; HOS2; KIP3; RSC1; RPA34; BRE2; IES3; TUB3; EAF7; CSE2; THP1; ASE1; LEO1; SPP1; EAF3; MED1)]
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0044451 (nucleoplasm part) [p < 0.001 (18/127: SAS3; SIF2; ISW1; SNT1; EAF5; SRB2; HOS4; SET3; HOS2; RSC1; BRE2; IES3; EAF7; CSE2; LEO1; SPP1; EAF3; MED1)]
"Any constituent part of the nucleoplasm, that part of the nuclear content other than the chromosomes or the nucleolus."
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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part) [p < 0.001 (25/304: NUP60; SAS3; SIF2; ISW1; SNT1; EAF5; SRB2; HOS4; SET3; SAC3; HOS2; KIP3; RSC1; RPA34; BRE2; IES3; TUB3; EAF7; CSE2; THP1; ASE1; LEO1; SPP1; EAF3; MED1)]
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0005654 (nucleoplasm) [p < 0.001 (18/135: SAS3; SIF2; ISW1; SNT1; EAF5; SRB2; HOS4; SET3; HOS2; RSC1; BRE2; IES3; EAF7; CSE2; LEO1; SPP1; EAF3; MED1)]
"That part of the nuclear content other than the chromosomes or the nucleolus."
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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part) [p < 0.001 (25/304: NUP60; SAS3; SIF2; ISW1; SNT1; EAF5; SRB2; HOS4; SET3; SAC3; HOS2; KIP3; RSC1; RPA34; BRE2; IES3; TUB3; EAF7; CSE2; THP1; ASE1; LEO1; SPP1; EAF3; MED1)]
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0031981 (nuclear lumen) [p < 0.001 (19/171: SAS3; SIF2; ISW1; SNT1; EAF5; SRB2; HOS4; SET3; HOS2; RSC1; RPA34; BRE2; IES3; EAF7; CSE2; LEO1; SPP1; EAF3; MED1)]
"The volume enclosed by the nuclear inner membrane."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0009987 (cellular process)
"Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0016043 (cellular component organization and biogenesis)
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component; includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope."
GO:0006996 (organelle organization and biogenesis) [p < 0.001 (37/580: FUN30; NUP60; SAS3; SIF2; CCZ1; ISW1; SNT1; HCM1; SRB2; CAP2; HOS4; CAP1; SET3; VPS54; SAC3; HOS2; KIP3; RSC1; RPA34; RPS4A; BRE2; IES3; YPT7; SRC1; TUB3; CIN4; EAF7; MCK1; CSE2; ESC8; ASE1; LEO1; SPP1; CIN2; KAR9; EAF3; MED1)]
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell."
GO:0051276 (chromosome organization and biogenesis) [p < 0.001 (27/333: FUN30; NUP60; SAS3; SIF2; ISW1; SNT1; HCM1; SRB2; HOS4; SET3; VPS54; HOS2; RSC1; RPS4A; BRE2; IES3; YPT7; SRC1; TUB3; EAF7; MCK1; CSE2; ESC8; LEO1; SPP1; EAF3; MED1)]
"A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0008152 (metabolic process)
"Processes that cause many of the chemical changes in living organisms, including anabolism and catabolism. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation."
GO:0043170 (macromolecule metabolic process)
"The chemical reactions and pathways involving macromolecules, large molecules including proteins, nucleic acids and carbohydrates."
GO:0043283 (biopolymer metabolic process)
"The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature e.g. polysaccharides and proteins."
GO:0043412 (biopolymer modification)
"The covalent alteration of one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological polymer, resulting in a change in its properties."
GO:0006464 (protein modification process)
"The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification)."
GO:0043687 (post-translational protein modification)
"The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome."
GO:0006476 (protein amino acid deacetylation) [p = 0.001 (6/18: SIF2; SNT1; HOS4; SET3; HOS2; EAF3)]
"The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid."
GO:0016575 (histone deacetylation) [p = 0.001 (6/18: SIF2; SNT1; HOS4; SET3; HOS2; EAF3)]
"The modification of histones by removal of acetyl groups."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0009987 (cellular process)
"Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0044237 (cellular metabolic process)
"The chemical reactions and pathways by which individual cells transform chemical substances."
GO:0006139 (nucleobase, nucleoside, nucleotide and nucleic acid metabolic process)
"The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids."
GO:0016070 (RNA metabolic process)
"The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage."
GO:0032774 (RNA biosynthetic process) [p = 0.003 (19/208: SAS3; SIF2; ISW1; HCM1; SRB2; EMI1; HOS2; RSC1; RPA34; BRE2; IES3; EAF7; CSE2; ESC8; THP1; LEO1; SPP1; EAF3; MED1)]
"The chemical reactions and pathways resulting in the formation of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers."
GO:0006351 (transcription, DNA-dependent) [p = 0.003 (19/208: SAS3; SIF2; ISW1; HCM1; SRB2; EMI1; HOS2; RSC1; RPA34; BRE2; IES3; EAF7; CSE2; ESC8; THP1; LEO1; SPP1; EAF3; MED1)]
"The synthesis of RNA on a template of DNA."
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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part) [p < 0.001 (25/304: NUP60; SAS3; SIF2; ISW1; SNT1; EAF5; SRB2; HOS4; SET3; SAC3; HOS2; KIP3; RSC1; RPA34; BRE2; IES3; TUB3; EAF7; CSE2; THP1; ASE1; LEO1; SPP1; EAF3; MED1)]
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0044451 (nucleoplasm part) [p < 0.001 (18/127: SAS3; SIF2; ISW1; SNT1; EAF5; SRB2; HOS4; SET3; HOS2; RSC1; BRE2; IES3; EAF7; CSE2; LEO1; SPP1; EAF3; MED1)]
"Any constituent part of the nucleoplasm, that part of the nuclear content other than the chromosomes or the nucleolus."
GO:0005667 (transcription factor complex)
"Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription."
GO:0000118 (histone deacetylase complex) [p = 0.008 (6/20: SIF2; SNT1; HOS4; SET3; HOS2; EAF3)]
"Complex that possesses histone deacetylase activity."
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