Genes in this set(13):
| Std. name | Sys. name | SGDID |
| MLP2 | YIL149C | S000001411 |
| NUP100 | YKL068W | S000001551 |
| RAD55 | YDR076W | S000002483 |
| NUP42 | YDR192C | S000002600 |
| XRS2 | YDR369C | S000002777 |
| RAD54 | YGL163C | S000003131 |
| SLX9 | YGR081C | S000003313 |
| YOR1 | YGR281W | S000003513 |
| GRR1 | YJR090C | S000003850 |
| NUP2 | YLR335W | S000004327 |
| PML39 | YML107C | S000004575 |
| MRE11 | YMR224C | S000004837 |
| DSE3 | YOR264W | S000005790 |
Enriched GO terms in this set:
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0051234 (establishment of localization)
"The directed movement of a cell, substance or cellular entity, such as a protein complex or organelle, to a specific location."
GO:0051649 (establishment of cellular localization)
"The directed movement of a substance or cellular entity, such as a protein complex or organelle, to a specific location within, or in the membrane of, a cell."
GO:0046907 (intracellular transport)
"The directed movement of substances within a cell."
GO:0051169 (nuclear transport) [p = 0.005 (5/54: MLP2; NUP100; NUP42; NUP2; PML39)]
"The directed movement of substances into, out of, or within the nucleus."
GO:0006913 (nucleocytoplasmic transport) [p = 0.005 (5/54: MLP2; NUP100; NUP42; NUP2; PML39)]
"The directed movement of molecules between the nucleus and the cytoplasm."
GO:0051168 (nuclear export) [p = 0.002 (5/40: MLP2; NUP100; NUP42; NUP2; PML39)]
"The directed movement of substances out of the nucleus."
GO:0006405 (RNA export from nucleus) [p = 0.001 (5/37: MLP2; NUP100; NUP42; NUP2; PML39)]
"The directed movement of RNA from the nucleus to the cytoplasm."
GO:0006406 (mRNA export from nucleus) [p = 0.001 (5/31: MLP2; NUP100; NUP42; NUP2; PML39)]
"The directed movement of mRNA from the nucleus to the cytoplasm."
---
GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part)
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0005635 (nuclear envelope) [p = 0.001 (5/37: MLP2; NUP100; NUP42; NUP2; PML39)]
"The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space)."
---
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0051179 (localization)
"The processes by which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in a specific location."
GO:0033036 (macromolecule localization)
"The processes by which a macromolecule is transported to, or maintained in, a specific location."
GO:0006403 (RNA localization) [p = 0.003 (5/41: MLP2; NUP100; NUP42; NUP2; PML39)]
"A process by which RNA is transported to, or maintained in, a specific location."
---
GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part)
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0044453 (nuclear membrane part) [p = 0.005 (4/24: NUP100; NUP42; NUP2; PML39)]
"Any constituent part of the nuclear membrane, the envelope that surrounds the nucleus of eukaryotic cells."
GO:0005643 (nuclear pore) [p = 0.004 (4/23: NUP100; NUP42; NUP2; PML39)]
"Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined."
---
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0051234 (establishment of localization)
"The directed movement of a cell, substance or cellular entity, such as a protein complex or organelle, to a specific location."
GO:0051649 (establishment of cellular localization)
"The directed movement of a substance or cellular entity, such as a protein complex or organelle, to a specific location within, or in the membrane of, a cell."
GO:0046907 (intracellular transport)
"The directed movement of substances within a cell."
GO:0051169 (nuclear transport) [p = 0.005 (5/54: MLP2; NUP100; NUP42; NUP2; PML39)]
"The directed movement of substances into, out of, or within the nucleus."
GO:0006913 (nucleocytoplasmic transport) [p = 0.005 (5/54: MLP2; NUP100; NUP42; NUP2; PML39)]
"The directed movement of molecules between the nucleus and the cytoplasm."
GO:0051170 (nuclear import) [p = 0.005 (4/25: MLP2; NUP100; NUP42; NUP2)]
"The directed movement of substances into the nucleus."
GO:0006606 (protein import into nucleus) [p = 0.005 (4/25: MLP2; NUP100; NUP42; NUP2)]
"The directed movement of a protein from the cytoplasm to the nucleus."
---
GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part)
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0031965 (nuclear membrane) [p = 0.005 (4/26: NUP100; NUP42; NUP2; PML39)]
"Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0009987 (cellular process)
"Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0044237 (cellular metabolic process)
"The chemical reactions and pathways by which individual cells transform chemical substances."
GO:0006139 (nucleobase, nucleoside, nucleotide and nucleic acid metabolic process)
"The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids."
GO:0006259 (DNA metabolic process)
"The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides."
GO:0006310 (DNA recombination)
"The processes by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction."
GO:0000725 (recombinational repair) [p = 0.002 (4/18: RAD55; XRS2; RAD54; MRE11)]
"The repair of damaged DNA that involves the exchange, reciprocal or nonreciprocal, of genetic material between the broken DNA molecule and a homologous region of DNA."
GO:0000724 (double-strand break repair via homologous recombination) [p = 0.001 (4/16: RAD55; XRS2; RAD54; MRE11)]
"The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule."
GO:0045003 (double-strand break repair via synthesis-dependent strand annealing) [p = 0.006 (3/10: RAD55; RAD54; MRE11)]
"SDSA is a major mechanism of double-strand break repair in mitosis which allows for the error-free repair of a double-strand break without the exchange of adjacent sequences. The broken DNA searches for and base pairs with a homologous region in an intact chromosome. DNA synthesis initiates from the 3' end of the invading DNA strand, using the intact chromosome as the template. Newly synthesized DNA is then displaced from the template and anneal with its complement on the other side of the double-strand break."
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