Genes in this set(8):
| Std. name | Sys. name | SGDID |
| SWD1 | YAR003W | S000000064 |
| SPT7 | YBR081C | S000000285 |
| SET1 | YHR119W | S000001161 |
| GCN5 | YGR252W | S000003484 |
| BUR2 | YLR226W | S000004216 |
| RPD3 | YNL330C | S000005274 |
| SIN3 | YOL004W | S000005364 |
| GAL11 | YOL051W | S000005411 |
Enriched GO terms in this set:
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0009987 (cellular process)
"Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0016043 (cellular component organization and biogenesis)
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component; includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope."
GO:0006996 (organelle organization and biogenesis)
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell."
GO:0051276 (chromosome organization and biogenesis) [p < 0.001 (8/333: SWD1; SPT7; SET1; GCN5; BUR2; RPD3; SIN3; GAL11)]
"A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information."
GO:0006325 (establishment and/or maintenance of chromatin architecture) [p = 0.001 (6/137: SWD1; SPT7; SET1; GCN5; RPD3; SIN3)]
"The specification, formation and maintenance of the physical structure of eukaryotic chromatin."
GO:0016568 (chromatin modification) [p = 0.001 (6/119: SWD1; SPT7; SET1; GCN5; RPD3; SIN3)]
"The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure."
GO:0016569 (covalent chromatin modification) [p < 0.001 (6/55: SWD1; SPT7; SET1; GCN5; RPD3; SIN3)]
"The alteration of DNA or protein in chromatin by the covalent addition or removal of chemical groups."
GO:0016570 (histone modification) [p < 0.001 (6/55: SWD1; SPT7; SET1; GCN5; RPD3; SIN3)]
"The covalent alteration of one or more amino acid residues within a histone protein."
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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part)
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0044451 (nucleoplasm part) [p < 0.001 (7/127: SWD1; SPT7; SET1; GCN5; RPD3; SIN3; GAL11)]
"Any constituent part of the nucleoplasm, that part of the nuclear content other than the chromosomes or the nucleolus."
---
GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part)
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0005654 (nucleoplasm) [p < 0.001 (7/135: SWD1; SPT7; SET1; GCN5; RPD3; SIN3; GAL11)]
"That part of the nuclear content other than the chromosomes or the nucleolus."
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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0031974 (membrane-enclosed lumen) [p = 0.001 (7/221: SWD1; SPT7; SET1; GCN5; RPD3; SIN3; GAL11)]
"The enclosed volume within a sealed membrane or between two sealed membranes."
GO:0043233 (organelle lumen) [p = 0.001 (7/221: SWD1; SPT7; SET1; GCN5; RPD3; SIN3; GAL11)]
"The volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear membrane lumen."
GO:0031981 (nuclear lumen) [p < 0.001 (7/171: SWD1; SPT7; SET1; GCN5; RPD3; SIN3; GAL11)]
"The volume enclosed by the nuclear inner membrane."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0009987 (cellular process)
"Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0016043 (cellular component organization and biogenesis)
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component; includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope."
GO:0006996 (organelle organization and biogenesis)
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell."
GO:0051276 (chromosome organization and biogenesis) [p < 0.001 (8/333: SWD1; SPT7; SET1; GCN5; BUR2; RPD3; SIN3; GAL11)]
"A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information."
---
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0009987 (cellular process)
"Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0016043 (cellular component organization and biogenesis)
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component; includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope."
GO:0022607 (cellular component assembly)
"A cellular process that results in the assembly of a part of the cell."
GO:0031497 (chromatin assembly)
"The assembly of DNA, histone proteins, and other associated proteins into chromatin structure, beginning with the formation of the basic unit, the nucleosome, followed by organization of the nucleosomes into higher order structures, ultimately giving rise to a complex organization of specific domains within the nucleus."
GO:0031507 (heterochromatin formation)
"The assembly of chromatin into heterochromatin, a compact and highly condensed form that is often, but not always, transcriptionally silent."
GO:0006342 (chromatin silencing)
"Repression of transcription by conversion of large regions of DNA into an inaccessible state often called heterochromatin."
GO:0000183 (chromatin silencing at rDNA) [p = 0.001 (3/9: SET1; RPD3; SIN3)]
"Repression of transcription of ribosomal DNA by the formation of heterochromatin."
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GO:0003674 (molecular_function)
"Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions."
GO:0030528 (transcription regulator activity)
"Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor."
GO:0016563 (transcription activator activity)
"Any transcription regulator activity required for initiation or upregulation of transcription."
GO:0003713 (transcription coactivator activity) [p = 0.001 (3/9: GCN5; RPD3; SIN3)]
"The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0009987 (cellular process)
"Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0016043 (cellular component organization and biogenesis)
"A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component; includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope."
GO:0022607 (cellular component assembly)
"A cellular process that results in the assembly of a part of the cell."
GO:0031497 (chromatin assembly)
"The assembly of DNA, histone proteins, and other associated proteins into chromatin structure, beginning with the formation of the basic unit, the nucleosome, followed by organization of the nucleosomes into higher order structures, ultimately giving rise to a complex organization of specific domains within the nucleus."
GO:0031507 (heterochromatin formation)
"The assembly of chromatin into heterochromatin, a compact and highly condensed form that is often, but not always, transcriptionally silent."
GO:0031509 (telomeric heterochromatin formation) [p = 0.001 (4/35: SWD1; SET1; RPD3; SIN3)]
"The assembly of chromatin into heterochromatin at the telomere."
GO:0006348 (chromatin silencing at telomere) [p = 0.001 (4/35: SWD1; SET1; RPD3; SIN3)]
"Repression of transcription of telomeric DNA by the formation of heterochromatin."
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