Genes in this set(5):
| Std. name | Sys. name | SGDID |
| DEP1 | YAL013W | S000000011 |
| CCR4 | YAL021C | S000000019 |
| SAP30 | YMR263W | S000004876 |
| POP2 | YNR052C | S000005335 |
| CTI6 | YPL181W | S000006102 |
Enriched GO terms in this set:
GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part)
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0044451 (nucleoplasm part) [p = 0.001 (5/127: DEP1; CCR4; SAP30; POP2; CTI6)]
"Any constituent part of the nucleoplasm, that part of the nuclear content other than the chromosomes or the nucleolus."
GO:0005667 (transcription factor complex) [p < 0.001 (5/59: DEP1; CCR4; SAP30; POP2; CTI6)]
"Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription."
GO:0000118 (histone deacetylase complex) [p = 0.006 (3/20: DEP1; SAP30; CTI6)]
"Complex that possesses histone deacetylase activity."
GO:0000508 (Rpd3L complex) [p = 0.001 (3/9: DEP1; SAP30; CTI6)]
"A multisubunit histone deacetylase complex that is involved in transcriptional regulation. In S. cerevisiae, this complex consists of Rpd3p, Sin3p, Ume1p, Pho23p, Sap30p, Sds3p, Cti6p, Rxt2p, Rxt3p, Dep1p, Ume6p and Ash1p."
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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0044422 (organelle part)
"Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane."
GO:0044446 (intracellular organelle part)
"A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane."
GO:0044428 (nuclear part)
"Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated."
GO:0005654 (nucleoplasm) [p = 0.001 (5/135: DEP1; CCR4; SAP30; POP2; CTI6)]
"That part of the nuclear content other than the chromosomes or the nucleolus."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0065007 (biological regulation)
"Any process that modulates the frequency, rate or extent of any biological process, quality or function."
GO:0050789 (regulation of biological process)
"Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule."
GO:0019222 (regulation of metabolic process) [p = 0.009 (5/223: DEP1; CCR4; SAP30; POP2; CTI6)]
"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism."
GO:0031323 (regulation of cellular metabolic process) [p = 0.009 (5/206: DEP1; CCR4; SAP30; POP2; CTI6)]
"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances."
GO:0019219 (regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process) [p = 0.006 (5/185: DEP1; CCR4; SAP30; POP2; CTI6)]
"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids."
GO:0045449 (regulation of transcription) [p = 0.005 (5/159: DEP1; CCR4; SAP30; POP2; CTI6)]
"Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0008152 (metabolic process)
"Processes that cause many of the chemical changes in living organisms, including anabolism and catabolism. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation."
GO:0043170 (macromolecule metabolic process)
"The chemical reactions and pathways involving macromolecules, large molecules including proteins, nucleic acids and carbohydrates."
GO:0043283 (biopolymer metabolic process)
"The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature e.g. polysaccharides and proteins."
GO:0043412 (biopolymer modification)
"The covalent alteration of one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological polymer, resulting in a change in its properties."
GO:0006464 (protein modification process)
"The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification)."
GO:0043687 (post-translational protein modification)
"The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome."
GO:0006476 (protein amino acid deacetylation) [p = 0.006 (3/18: DEP1; SAP30; CTI6)]
"The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid."
GO:0016575 (histone deacetylation) [p = 0.006 (3/18: DEP1; SAP30; CTI6)]
"The modification of histones by removal of acetyl groups."
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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."
GO:0031974 (membrane-enclosed lumen) [p = 0.009 (5/221: DEP1; CCR4; SAP30; POP2; CTI6)]
"The enclosed volume within a sealed membrane or between two sealed membranes."
GO:0043233 (organelle lumen) [p = 0.009 (5/221: DEP1; CCR4; SAP30; POP2; CTI6)]
"The volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear membrane lumen."
GO:0031981 (nuclear lumen) [p = 0.006 (5/171: DEP1; CCR4; SAP30; POP2; CTI6)]
"The volume enclosed by the nuclear inner membrane."
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GO:0003674 (molecular_function)
"Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions."
GO:0003824 (catalytic activity)
"Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic."
GO:0016787 (hydrolase activity)
"Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3."
GO:0016788 (hydrolase activity, acting on ester bonds)
"Catalysis of the hydrolysis of any ester bond."
GO:0004518 (nuclease activity)
"Catalysis of the hydrolysis of ester linkages within nucleic acids."
GO:0004527 (exonuclease activity)
"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end."
GO:0008408 (3'-5' exonuclease activity)
"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end."
GO:0000175 (3'-5'-exoribonuclease activity) [p = 0.009 (2/3: CCR4; POP2)]
"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0009987 (cellular process)
"Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0044237 (cellular metabolic process)
"The chemical reactions and pathways by which individual cells transform chemical substances."
GO:0006139 (nucleobase, nucleoside, nucleotide and nucleic acid metabolic process)
"The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids."
GO:0006350 (transcription) [p = 0.009 (5/222: DEP1; CCR4; SAP30; POP2; CTI6)]
"The synthesis of either RNA on a template of DNA or DNA on a template of RNA."
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