Genes in this set(225):

Std. name	Sys. name	SGDID
VPS8	YAL002W	S000000002
PMT2	YAL023C	S000000021
BUD14	YAR014C	S000000069
SLA1	YBL007C	S000000103
	YBL107C	S000000203
GAL10	YBR019C	S000000223
	YBR030W	S000000234
SCO1	YBR037C	S000000241
	YBR047W	S000000251
YSA1	YBR111C	S000000315
ATG12	YBR217W	S000000421
PDB1	YBR221C	S000000425
	YBR235W	S000000439
SAF1	YBR280C	S000000484
RER1	YCL001W	S000000507
ILV6	YCL009C	S000000515
SRO9	YCL037C	S000000542
	YCL056C	S000000561
MAK31	YCR020C-A	S000000614
PER1	YCR044C	S000000640
	YCR090C	S000000686
CUP5	YEL027W	S000000753
GDA1	YEL042W	S000000768
	YEL043W	S000000769
	YEL048C	S000000774
VMA8	YEL051W	S000000777
MAK10	YEL053C	S000000779
AVT2	YEL064C	S000000790
HPA3	YEL066W	S000000792
GLN3	YER040W	S000000842
	YER084W	S000000886
SCS2	YER120W	S000000922
GLO3	YER122C	S000000924
UBP5	YER144C	S000000946
RAD4	YER162C	S000000964
	YER187W	S000000989
OPI1	YHL020C	S000001012
GOS1	YHL031C	S000001023
VPS29	YHR012W	S000001054
PPA1	YHR026W	S000001068
VMA22	YHR060W	S000001102
COX23	YHR116W	S000001158
TOM71	YHR117W	S000001159
LIN1	YHR156C	S000001199
YIA6	YIL006W	S000001268
TED1	YIL039W	S000001301
FIS1	YIL065C	S000001327
SEC28	YIL076W	S000001338
COA1	YIL157C	S000001419
	YIL166C	S000001428
MRS1	YIR021W	S000001460
DAL2	YIR029W	S000001468
CCE1	YKL011C	S000001494
VMA5	YKL080W	S000001563
TEF4	YKL081W	S000001564
PRR1	YKL116C	S000001599
VPH2	YKL119C	S000001602
	YKL162C	S000001645
IRS4	YKR019C	S000001727
VPS51	YKR020W	S000001728
BCH2	YKR027W	S000001735
GMH1	YKR030W	S000001738
RPL40B	YKR094C	S000001802
BAS1	YKR099W	S000001807
	YFL054C	S000001840
RPO41	YFL036W	S000001858
RIM15	YFL033C	S000001861
BST1	YFL025C	S000001869
VMA10	YHR039C-A	S000002100
RPL2A	YFR031C-A	S000002104
COX9	YDL067C	S000002225
VAM6	YDL077C	S000002235
RPS16B	YDL083C	S000002241
GET3	YDL100C	S000002258
RPL41A	YDL184C	S000002343
RPL35A	YDL191W	S000002350
GGC1	YDL198C	S000002357
HBT1	YDL223C	S000002382
TPS2	YDR074W	S000002481
	YDR107C	S000002514
GSG1	YDR108W	S000002515
VPS61	YDR136C	S000002543
RGP1	YDR137W	S000002544
ENT5	YDR153C	S000002560
RAV2	YDR202C	S000002610
	YDR203W	S000002611
EXG2	YDR261C	S000002669
SUM1	YDR310C	S000002718
SWA2	YDR320C	S000002728
VPS74	YDR372C	S000002780
SHE9	YDR393W	S000002801
MRPL28	YDR462W	S000002870
EMI1	YDR512C	S000002920
COG7	YGL005C	S000002973
DBP3	YGL078C	S000003046
GUP1	YGL084C	S000003052
SNF4	YGL115W	S000003083
VAM7	YGL212W	S000003180
	YGL220W	S000003188
ZRT1	YGL255W	S000003224
VMA7	YGR020C	S000003252
CAX4	YGR036C	S000003268
UPF3	YGR072W	S000003304
VMA21	YGR105W	S000003337
CHO2	YGR157W	S000003389
PDX1	YGR193C	S000003425
MGA1	YGR249W	S000003481
APL6	YGR261C	S000003493
SYS1	YJL004C	S000003541
PEP8	YJL053W	S000003589
BCK1	YJL095W	S000003631
	YJL147C	S000003683
VPS35	YJL154C	S000003690
CPS1	YJL172W	S000003708
MNN11	YJL183W	S000003719
RAV1	YJR033C	S000003794
GEF1	YJR040W	S000003801
	YJR056C	S000003817
OPI3	YJR073C	S000003834
MIR1	YJR077C	S000003838
	YJR088C	S000003848
ILM1	YJR118C	S000003879
	YJR120W	S000003881
STR2	YJR130C	S000003891
ENT4	YLL038C	S000003961
VPS13	YLL040C	S000003963
	YLR046C	S000004036
EMP70	YLR083C	S000004073
CSF1	YLR087C	S000004077
XDJ1	YLR090W	S000004080
	YLR091W	S000004081
SUL2	YLR092W	S000004082
NYV1	YLR093C	S000004083
GIS3	YLR094C	S000004084
IOC2	YLR095C	S000004085
CHA4	YLR098C	S000004088
ICT1	YLR099C	S000004089
SRN2	YLR119W	S000004109
SAM1	YLR180W	S000004170
RPL37A	YLR185W	S000004175
HCR1	YLR192C	S000004182
LIP2	YLR239C	S000004229
VPS63	YLR261C	S000004251
RPS30A	YLR287C-A	S000004278
IMH1	YLR309C	S000004300
REC102	YLR329W	S000004321
VPS38	YLR360W	S000004352
ATP10	YLR393W	S000004385
RPS1A	YLR441C	S000004433
YPT7	YML001W	S000004460
YMD8	YML038C	S000004502
COG8	YML071C	S000004536
MVP1	YMR004W	S000004606
	YMR010W	S000004612
SOK2	YMR016C	S000004618
PEX12	YMR026C	S000004628
STV1	YMR054W	S000004658
PKR1	YMR123W	S000004730
REC114	YMR133W	S000004740
RPL13B	YMR142C	S000004750
YIM1	YMR152W	S000004760
	YMR157C	S000004766
GAS3	YMR215W	S000004828
SKY1	YMR216C	S000004829
RSN1	YMR266W	S000004879
SCS7	YMR272C	S000004885
RCE1	YMR274C	S000004887
COG6	YNL041C	S000004986
YIP3	YNL044W	S000004989
COG5	YNL051W	S000004996
	YNL058C	S000005003
RPL16B	YNL069C	S000005013
LAT1	YNL071W	S000005015
MKS1	YNL076W	S000005020
FAR11	YNL127W	S000005071
KEX2	YNL238W	S000005182
GIS2	YNL255C	S000005199
	YNL296W	S000005240
MON2	YNL297C	S000005241
TRF5	YNL299W	S000005243
FIG4	YNL325C	S000005269
PPG1	YNR032W	S000005315
COQ2	YNR041C	S000005324
TLG2	YOL018C	S000005378
IRA2	YOL081W	S000005441
INO4	YOL108C	S000005468
MDY2	YOL111C	S000005471
RPS19A	YOL121C	S000005481
	YOL138C	S000005498
SHE4	YOR035C	S000005561
MSA1	YOR066W	S000005592
VAM10	YOR068C	S000005594
VPS5	YOR069W	S000005595
VAM3	YOR106W	S000005632
CEX1	YOR112W	S000005638
VPS17	YOR132W	S000005658
RUD3	YOR216C	S000005742
VPH1	YOR270C	S000005796
HSD1	YOR311C	S000005838
VMA4	YOR332W	S000005859
TEA1	YOR337W	S000005864
EGD1	YPL037C	S000005958
BTS1	YPL069C	S000005990
SYH1	YPL105C	S000006026
VPS30	YPL120W	S000006041
GIP3	YPL137C	S000006058
BEM4	YPL161C	S000006082
APL5	YPL195W	S000006116
OXR1	YPL196W	S000006117
YIG1	YPL201C	S000006122
AFT2	YPL202C	S000006123
TFP3	YPL234C	S000006155
DSS4	YPR017C	S000006221
SRO7	YPR032W	S000006236
	YPR050C	S000006254
MAK3	YPR051W	S000006255
MRL1	YPR079W	S000006283
	YPR084W	S000006288
MRPL51	YPR100W	S000006304
NCA2	YPR155C	S000006359
TPO3	YPR156C	S000006360
	YPR197C	S000006401
DID2	YKR035W-A	S000006435
	YMR158C-A	S000007249
BUD25	YER014C-A	S000007590

Enriched GO terms in this set:

GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."

    GO:0065007 (biological regulation)
    "Any process that modulates the frequency, rate or extent of any biological process, quality or function."

        GO:0065008 (regulation of biological quality)
        "Any process that modulates the frequency, rate or extent of a biological quality. A biological quality is a measurable attribute of an organism or part of an organism, such as size, mass, shape, color, etc."

            GO:0042592 (homeostatic process)
            "The biological processes involved in the maintenance of an internal equilibrium."

                GO:0048878 (chemical homeostasis)
                "The biological processes involved in the maintenance of an internal equilibrium of a chemical."

                    GO:0050801 (ion homeostasis)
                    "Any of the processes involved in the maintenance of an internal equilibrium of ions within an organism or cell."

                        GO:0055080 (cation homeostasis) [p = 0.002   (19/49: PER1; CUP5; VMA8; PPA1; VMA22; VMA5; VPH2; VMA10; GGC1; RAV2; VMA7; RAV1; GEF1; STV1; SKY1; VPH1; VMA4; AFT2; TFP3)]
                        "The regulation of the levels, transport, and metabolism of cations."

                            GO:0055067 (monovalent inorganic cation homeostasis) [p = 0.001   (14/28: CUP5; VMA8; PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; VMA4; TFP3)]
                            "The regulation of the levels, transport, and metabolism of monovalent inorganic cations."

                                GO:0006885 (regulation of pH) [p < 0.001   (14/23: CUP5; VMA8; PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; VMA4; TFP3)]
                                "Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion."

                                    GO:0030641 (regulation of cellular pH) [p < 0.001   (14/22: CUP5; VMA8; PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; VMA4; TFP3)]
                                    "The regulation of the levels, transport, and metabolism of hydrogen ions (protons) within a cell or between a cell and its external environment."

                                        GO:0051453 (regulation of intracellular pH) [p < 0.001   (14/22: CUP5; VMA8; PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; VMA4; TFP3)]
                                        "Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion."

                                            GO:0051452 (intracellular pH reduction) [p < 0.001   (14/21: CUP5; VMA8; PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; VMA4; TFP3)]
                                            "Any process that reduces the internal pH of a cell, measured by the concentration of the hydrogen ion."

                                                GO:0007035 (vacuolar acidification) [p < 0.001   (14/21: CUP5; VMA8; PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; VMA4; TFP3)]
                                                "Any process that reduces the pH of the vacuole, measured by the concentration of the hydrogen ion."

---

GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."

    GO:0044464 (cell part)
    "Any constituent part of a cell, the basic structural and functional unit of all organisms."

        GO:0044424 (intracellular part)
        "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."

            GO:0005737 (cytoplasm) [p < 0.001   (168/1003: VPS8; PMT2; SLA1; [YBL107C]; SCO1; [YBR047W]; YSA1; PDB1; RER1; ILV6; [YCL056C]; MAK31; PER1; [YCR090C]; CUP5; GDA1; [YEL043W]; VMA8; MAK10; AVT2; HPA3; GLN3; SCS2; GLO3; OPI1; VPS29; PPA1; VMA22; COX23; TOM71; YIA6; TED1; FIS1; SEC28; COA1; MRS1; CCE1; VMA5; TEF4; PRR1; VPH2; [YKL162C]; IRS4; VPS51; BCH2; GMH1; RPL40B; RPO41; RIM15; BST1; VMA10; RPL2A; COX9; VAM6; RPS16B; GET3; RPL41A; RPL35A; GGC1; TPS2; GSG1; RGP1; ENT5; RAV2; SWA2; VPS74; SHE9; MRPL28; COG7; GUP1; SNF4; VAM7; [YGL220W]; VMA7; CAX4; UPF3; VMA21; CHO2; PDX1; APL6; SYS1; PEP8; [YJL147C]; VPS35; CPS1; MNN11; RAV1; GEF1; [YJR056C]; OPI3; MIR1; [YJR088C]; ILM1; STR2; ENT4; VPS13; EMP70; CSF1; XDJ1; [YLR091W]; NYV1; GIS3; SRN2; SAM1; RPL37A; HCR1; LIP2; RPS30A; IMH1; ATP10; RPS1A; YPT7; COG8; MVP1; [YMR010W]; PEX12; STV1; PKR1; RPL13B; YIM1; [YMR157C]; SKY1; SCS7; RCE1; COG6; YIP3; COG5; [YNL058C]; RPL16B; LAT1; KEX2; GIS2; MON2; FIG4; PPG1; COQ2; TLG2; IRA2; MDY2; RPS19A; [YOL138C]; SHE4; VAM10; VPS5; VAM3; CEX1; VPS17; RUD3; VPH1; HSD1; VMA4; EGD1; BTS1; SYH1; GIP3; BEM4; APL5; OXR1; YIG1; AFT2; TFP3; SRO7; MAK3; MRL1; MRPL51; NCA2; TPO3; DID2)]
            "All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."

---

GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."

    GO:0044464 (cell part)
    "Any constituent part of a cell, the basic structural and functional unit of all organisms."

        GO:0044424 (intracellular part)
        "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."

            GO:0044444 (cytoplasmic part) [p < 0.001   (145/753: VPS8; PMT2; SLA1; SCO1; [YBR047W]; YSA1; PDB1; RER1; ILV6; MAK31; PER1; CUP5; GDA1; [YEL043W]; VMA8; MAK10; AVT2; GLN3; SCS2; GLO3; OPI1; VPS29; PPA1; VMA22; COX23; TOM71; YIA6; TED1; FIS1; SEC28; COA1; MRS1; CCE1; VMA5; TEF4; VPH2; [YKL162C]; IRS4; VPS51; BCH2; GMH1; RPL40B; RPO41; BST1; VMA10; RPL2A; COX9; VAM6; RPS16B; GET3; RPL41A; RPL35A; GGC1; TPS2; GSG1; RGP1; ENT5; RAV2; SWA2; SHE9; MRPL28; COG7; GUP1; VAM7; VMA7; CAX4; VMA21; CHO2; PDX1; APL6; SYS1; PEP8; [YJL147C]; VPS35; CPS1; MNN11; RAV1; GEF1; OPI3; MIR1; [YJR088C]; ILM1; ENT4; VPS13; EMP70; CSF1; XDJ1; [YLR091W]; NYV1; SRN2; RPL37A; HCR1; LIP2; RPS30A; IMH1; ATP10; RPS1A; YPT7; COG8; PEX12; STV1; PKR1; RPL13B; YIM1; [YMR157C]; SCS7; RCE1; COG6; YIP3; COG5; [YNL058C]; RPL16B; LAT1; KEX2; MON2; FIG4; COQ2; TLG2; IRA2; RPS19A; [YOL138C]; VAM10; VPS5; VAM3; VPS17; RUD3; VPH1; HSD1; VMA4; EGD1; BTS1; SYH1; GIP3; APL5; OXR1; YIG1; AFT2; TFP3; SRO7; MAK3; MRL1; MRPL51; NCA2; TPO3; DID2)]
            "Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."

                GO:0044437 (vacuolar part) [p = 0.002   (18/47: PER1; CUP5; VMA8; PPA1; VMA5; VMA10; VAM6; VAM7; VMA7; NYV1; STV1; FIG4; VAM10; VAM3; VPH1; VMA4; TFP3; TPO3)]
                "Any constituent part of a vacuole, a closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material."

                    GO:0016471 (vacuolar proton-transporting V-type ATPase complex) [p < 0.001   (10/14: CUP5; VMA8; PPA1; VMA5; VMA10; VMA7; STV1; VPH1; VMA4; TFP3)]
                    "A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen."

---

GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."

    GO:0009987 (cellular process)
    "Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."

        GO:0016043 (cellular component organization and biogenesis)
        "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component; includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope."

            GO:0006996 (organelle organization and biogenesis)
            "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell."

                GO:0007033 (vacuole organization and biogenesis) [p < 0.001   (19/46: CUP5; VMA8; PPA1; VMA22; VMA5; VPH2; VMA10; VAM6; RAV2; VAM7; VMA7; RAV1; NYV1; YPT7; STV1; VAM10; VPH1; VMA4; TFP3)]
                "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vacuole."

---

GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."

    GO:0051234 (establishment of localization)
    "The directed movement of a cell, substance or cellular entity, such as a protein complex or organelle, to a specific location."

        GO:0006810 (transport)
        "The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells."

            GO:0016192 (vesicle-mediated transport) [p = 0.002   (42/164: VPS8; SLA1; RER1; CUP5; GLO3; GOS1; VPS29; SEC28; VPS51; BCH2; BST1; GET3; GSG1; RGP1; ENT5; COG7; VAM7; APL6; SYS1; PEP8; VPS35; RAV1; ENT4; VPS13; NYV1; IMH1; VPS38; YPT7; COG8; RSN1; COG6; YIP3; COG5; MON2; TLG2; VPS5; VAM3; VPS17; RUD3; APL5; SRO7; DID2)]
            "The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell."

                GO:0048193 (Golgi vesicle transport) [p < 0.001   (25/73: RER1; GLO3; GOS1; SEC28; BCH2; BST1; GET3; GSG1; ENT5; COG7; VAM7; APL6; SYS1; IMH1; YPT7; COG8; RSN1; COG6; YIP3; COG5; MON2; VAM3; RUD3; APL5; SRO7)]
                "The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles."

---

GO:0003674 (molecular_function)
"Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions."

    GO:0005215 (transporter activity)
    "Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells."

        GO:0022857 (transmembrane transporter activity)
        "Catalysis of the transfer of a substance from one side of a membrane to the other."

            GO:0022891 (substrate-specific transmembrane transporter activity)
            "Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other."

                GO:0015075 (ion transmembrane transporter activity)
                "Catalysis of the transfer of an ion from one side of a membrane to the other."

                    GO:0008324 (cation transmembrane transporter activity)
                    "Catalysis of the transfer of cation from one side of the membrane to the other."

                        GO:0022890 (inorganic cation transmembrane transporter activity)
                        "Catalysis of the transfer of inorganic cations from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage."

                            GO:0015077 (monovalent inorganic cation transmembrane transporter activity) [p = 0.002   (10/17: CUP5; VMA8; PPA1; VMA5; VMA10; VMA7; STV1; VPH1; VMA4; TFP3)]
                            "Catalysis of the transfer of a inorganic cations with a valency of one from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage."

                                GO:0015078 (hydrogen ion transmembrane transporter activity) [p < 0.001   (10/14: CUP5; VMA8; PPA1; VMA5; VMA10; VMA7; STV1; VPH1; VMA4; TFP3)]
                                "Catalysis of the transfer of hydrogen ions from one side of a membrane to the other."

                                    GO:0046961 (hydrogen ion transporting ATPase activity, rotational mechanism) [p = 0.002   (9/13: VMA8; PPA1; VMA5; VMA10; VMA7; STV1; VPH1; VMA4; TFP3)]
                                    "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism."

---

GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."

    GO:0044464 (cell part)
    "Any constituent part of a cell, the basic structural and functional unit of all organisms."

        GO:0044424 (intracellular part)
        "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."

            GO:0044444 (cytoplasmic part) [p < 0.001   (145/753: VPS8; PMT2; SLA1; SCO1; [YBR047W]; YSA1; PDB1; RER1; ILV6; MAK31; PER1; CUP5; GDA1; [YEL043W]; VMA8; MAK10; AVT2; GLN3; SCS2; GLO3; OPI1; VPS29; PPA1; VMA22; COX23; TOM71; YIA6; TED1; FIS1; SEC28; COA1; MRS1; CCE1; VMA5; TEF4; VPH2; [YKL162C]; IRS4; VPS51; BCH2; GMH1; RPL40B; RPO41; BST1; VMA10; RPL2A; COX9; VAM6; RPS16B; GET3; RPL41A; RPL35A; GGC1; TPS2; GSG1; RGP1; ENT5; RAV2; SWA2; SHE9; MRPL28; COG7; GUP1; VAM7; VMA7; CAX4; VMA21; CHO2; PDX1; APL6; SYS1; PEP8; [YJL147C]; VPS35; CPS1; MNN11; RAV1; GEF1; OPI3; MIR1; [YJR088C]; ILM1; ENT4; VPS13; EMP70; CSF1; XDJ1; [YLR091W]; NYV1; SRN2; RPL37A; HCR1; LIP2; RPS30A; IMH1; ATP10; RPS1A; YPT7; COG8; PEX12; STV1; PKR1; RPL13B; YIM1; [YMR157C]; SCS7; RCE1; COG6; YIP3; COG5; [YNL058C]; RPL16B; LAT1; KEX2; MON2; FIG4; COQ2; TLG2; IRA2; RPS19A; [YOL138C]; VAM10; VPS5; VAM3; VPS17; RUD3; VPH1; HSD1; VMA4; EGD1; BTS1; SYH1; GIP3; APL5; OXR1; YIG1; AFT2; TFP3; SRO7; MAK3; MRL1; MRPL51; NCA2; TPO3; DID2)]
            "Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."

                GO:0044437 (vacuolar part) [p = 0.002   (18/47: PER1; CUP5; VMA8; PPA1; VMA5; VMA10; VAM6; VAM7; VMA7; NYV1; STV1; FIG4; VAM10; VAM3; VPH1; VMA4; TFP3; TPO3)]
                "Any constituent part of a vacuole, a closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material."

                    GO:0005774 (vacuolar membrane) [p = 0.002   (18/46: PER1; CUP5; VMA8; PPA1; VMA5; VMA10; VAM6; VAM7; VMA7; NYV1; STV1; FIG4; VAM10; VAM3; VPH1; VMA4; TFP3; TPO3)]
                    "The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell."

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GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."

    GO:0044464 (cell part)
    "Any constituent part of a cell, the basic structural and functional unit of all organisms."

        GO:0044424 (intracellular part)
        "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."

            GO:0044444 (cytoplasmic part) [p < 0.001   (145/753: VPS8; PMT2; SLA1; SCO1; [YBR047W]; YSA1; PDB1; RER1; ILV6; MAK31; PER1; CUP5; GDA1; [YEL043W]; VMA8; MAK10; AVT2; GLN3; SCS2; GLO3; OPI1; VPS29; PPA1; VMA22; COX23; TOM71; YIA6; TED1; FIS1; SEC28; COA1; MRS1; CCE1; VMA5; TEF4; VPH2; [YKL162C]; IRS4; VPS51; BCH2; GMH1; RPL40B; RPO41; BST1; VMA10; RPL2A; COX9; VAM6; RPS16B; GET3; RPL41A; RPL35A; GGC1; TPS2; GSG1; RGP1; ENT5; RAV2; SWA2; SHE9; MRPL28; COG7; GUP1; VAM7; VMA7; CAX4; VMA21; CHO2; PDX1; APL6; SYS1; PEP8; [YJL147C]; VPS35; CPS1; MNN11; RAV1; GEF1; OPI3; MIR1; [YJR088C]; ILM1; ENT4; VPS13; EMP70; CSF1; XDJ1; [YLR091W]; NYV1; SRN2; RPL37A; HCR1; LIP2; RPS30A; IMH1; ATP10; RPS1A; YPT7; COG8; PEX12; STV1; PKR1; RPL13B; YIM1; [YMR157C]; SCS7; RCE1; COG6; YIP3; COG5; [YNL058C]; RPL16B; LAT1; KEX2; MON2; FIG4; COQ2; TLG2; IRA2; RPS19A; [YOL138C]; VAM10; VPS5; VAM3; VPS17; RUD3; VPH1; HSD1; VMA4; EGD1; BTS1; SYH1; GIP3; APL5; OXR1; YIG1; AFT2; TFP3; SRO7; MAK3; MRL1; MRPL51; NCA2; TPO3; DID2)]
            "Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."

                GO:0005773 (vacuole) [p = 0.002   (22/64: PER1; CUP5; VMA8; PPA1; VMA5; VMA10; VAM6; VAM7; VMA7; CPS1; NYV1; YPT7; STV1; [YNL058C]; FIG4; [YOL138C]; VAM10; VAM3; VPH1; VMA4; TFP3; TPO3)]
                "A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol."

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