Genes in this set(19):
| Std. name | Sys. name | SGDID |
| UMP1 | YBR173C | S000000377 |
| RAD23 | YEL037C | S000000763 |
| RAD24 | YER173W | S000000975 |
| RAD57 | YDR004W | S000002411 |
| PPH3 | YDR075W | S000002482 |
| RAD55 | YDR076W | S000002483 |
| RAD9 | YDR217C | S000002625 |
| | YDR532C | S000002940 |
| DOC1 | YGL240W | S000003209 |
| YOR1 | YGR281W | S000003513 |
| CSN12 | YJR084W | S000003844 |
| RPS4A | YJR145C | S000003906 |
| RAD5 | YLR032W | S000004022 |
| TOP3 | YLR234W | S000004224 |
| MEC3 | YLR288C | S000004279 |
| UBX2 | YML013W | S000004475 |
| PML39 | YML107C | S000004575 |
| RAD17 | YOR368W | S000005895 |
| DDC1 | YPL194W | S000006115 |
Enriched GO terms in this set:
GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0008152 (metabolic process)
"Processes that cause many of the chemical changes in living organisms, including anabolism and catabolism. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation."
GO:0043170 (macromolecule metabolic process)
"The chemical reactions and pathways involving macromolecules, large molecules including proteins, nucleic acids and carbohydrates."
GO:0043283 (biopolymer metabolic process) [p = 0.010 (17/737: UMP1; RAD23; RAD24; RAD57; PPH3; RAD55; RAD9; [YDR532C]; DOC1; YOR1; RPS4A; RAD5; TOP3; MEC3; UBX2; RAD17; DDC1)]
"The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature e.g. polysaccharides and proteins."
GO:0006259 (DNA metabolic process) [p = 0.005 (13/384: RAD23; RAD24; RAD57; RAD55; RAD9; [YDR532C]; YOR1; RPS4A; RAD5; TOP3; MEC3; RAD17; DDC1)]
"The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides."
GO:0006281 (DNA repair) [p = 0.001 (8/88: RAD23; RAD24; RAD57; RAD55; RAD9; RAD5; RAD17; DDC1)]
"The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0050896 (response to stimulus) [p = 0.004 (13/335: UMP1; RAD23; RAD24; RAD57; PPH3; RAD55; RAD9; YOR1; CSN12; RAD5; MEC3; RAD17; DDC1)]
"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus."
GO:0009719 (response to endogenous stimulus) [p < 0.001 (10/123: UMP1; RAD23; RAD24; RAD57; RAD55; RAD9; RAD5; MEC3; RAD17; DDC1)]
"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an endogenous stimulus."
GO:0006974 (response to DNA damage stimulus) [p < 0.001 (10/120: UMP1; RAD23; RAD24; RAD57; RAD55; RAD9; RAD5; MEC3; RAD17; DDC1)]
"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism."
GO:0042770 (DNA damage response, signal transduction) [p = 0.001 (4/11: RAD24; RAD9; MEC3; RAD17)]
"A cascade of processes induced by the detection of DNA damage within a cell."
GO:0000077 (DNA damage checkpoint) [p = 0.001 (4/11: RAD24; RAD9; MEC3; RAD17)]
"A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0008152 (metabolic process)
"Processes that cause many of the chemical changes in living organisms, including anabolism and catabolism. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation."
GO:0043170 (macromolecule metabolic process)
"The chemical reactions and pathways involving macromolecules, large molecules including proteins, nucleic acids and carbohydrates."
GO:0043283 (biopolymer metabolic process) [p = 0.010 (17/737: UMP1; RAD23; RAD24; RAD57; PPH3; RAD55; RAD9; [YDR532C]; DOC1; YOR1; RPS4A; RAD5; TOP3; MEC3; UBX2; RAD17; DDC1)]
"The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature e.g. polysaccharides and proteins."
GO:0006259 (DNA metabolic process) [p = 0.005 (13/384: RAD23; RAD24; RAD57; RAD55; RAD9; [YDR532C]; YOR1; RPS4A; RAD5; TOP3; MEC3; RAD17; DDC1)]
"The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides."
GO:0006310 (DNA recombination) [p = 0.001 (7/62: RAD24; RAD57; RAD55; TOP3; MEC3; RAD17; DDC1)]
"The processes by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction."
GO:0007131 (meiotic recombination) [p = 0.004 (5/28: RAD24; RAD57; RAD55; TOP3; RAD17)]
"The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity."
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GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."
GO:0009987 (cellular process)
"Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."
GO:0022402 (cell cycle process)
"A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events."
GO:0022403 (cell cycle phase)
"A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events."
GO:0007127 (meiosis I) [p = 0.005 (5/35: RAD24; RAD57; RAD55; TOP3; RAD17)]
"Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells."
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