Genes in this set(165):

     Std. name     Sys. name     SGDID
     PMT2     YAL023C     S000000021
      YBL107C     S000000203
     GAL10     YBR019C     S000000223
      YBR030W     S000000234
     SCO1     YBR037C     S000000241
      YBR047W     S000000251
     ATG12     YBR217W     S000000421
     SAF1     YBR280C     S000000484
     RER1     YCL001W     S000000507
     ILV6     YCL009C     S000000515
      YCL056C     S000000561
     MAK31     YCR020C-A     S000000614
     PER1     YCR044C     S000000640
      YCR090C     S000000686
     GDA1     YEL042W     S000000768
     AVT2     YEL064C     S000000790
     HPA3     YEL066W     S000000792
     GLN3     YER040W     S000000842
      YER084W     S000000886
     SCS2     YER120W     S000000922
     UBP5     YER144C     S000000946
     RAD4     YER162C     S000000964
      YER187W     S000000989
     PPA1     YHR026W     S000001068
     VMA22     YHR060W     S000001102
     TOM71     YHR117W     S000001159
     LIN1     YHR156C     S000001199
     YIA6     YIL006W     S000001268
     TED1     YIL039W     S000001301
     FIS1     YIL065C     S000001327
     SEC28     YIL076W     S000001338
     COA1     YIL157C     S000001419
      YIL166C     S000001428
     MRS1     YIR021W     S000001460
     DAL2     YIR029W     S000001468
     CCE1     YKL011C     S000001494
     VPS24     YKL041W     S000001524
     VMA5     YKL080W     S000001563
     TEF4     YKL081W     S000001564
     PRR1     YKL116C     S000001599
     VPH2     YKL119C     S000001602
      YKL162C     S000001645
     BCH2     YKR027W     S000001735
     GMH1     YKR030W     S000001738
     RPL40B     YKR094C     S000001802
     BAS1     YKR099W     S000001807
      YFL054C     S000001840
     RIM15     YFL033C     S000001861
     BST1     YFL025C     S000001869
     VMA10     YHR039C-A     S000002100
     RPL2A     YFR031C-A     S000002104
     COX9     YDL067C     S000002225
     VAM6     YDL077C     S000002235
     RPS16B     YDL083C     S000002241
     GET3     YDL100C     S000002258
     RPL41A     YDL184C     S000002343
     RPL35A     YDL191W     S000002350
     GGC1     YDL198C     S000002357
     GSG1     YDR108W     S000002515
     VPS61     YDR136C     S000002543
     ENT5     YDR153C     S000002560
     RAV2     YDR202C     S000002610
      YDR203W     S000002611
     EXG2     YDR261C     S000002669
     VPS74     YDR372C     S000002780
     MRPL28     YDR462W     S000002870
     COG7     YGL005C     S000002973
     DBP3     YGL078C     S000003046
     SNF4     YGL115W     S000003083
     VAM7     YGL212W     S000003180
      YGL220W     S000003188
     ZRT1     YGL255W     S000003224
     VMA7     YGR020C     S000003252
     CAX4     YGR036C     S000003268
     UPF3     YGR072W     S000003304
     VMA21     YGR105W     S000003337
     CHO2     YGR157W     S000003389
     PDX1     YGR193C     S000003425
     MGA1     YGR249W     S000003481
     APL6     YGR261C     S000003493
      YJL147C     S000003683
     CPS1     YJL172W     S000003708
     RAV1     YJR033C     S000003794
     GEF1     YJR040W     S000003801
      YJR056C     S000003817
     MIR1     YJR077C     S000003838
      YJR088C     S000003848
      YJR120W     S000003881
     STR2     YJR130C     S000003891
     ENT4     YLL038C     S000003961
     VPS13     YLL040C     S000003963
      YLR046C     S000004036
     EMP70     YLR083C     S000004073
     CSF1     YLR087C     S000004077
     XDJ1     YLR090W     S000004080
      YLR091W     S000004081
     SUL2     YLR092W     S000004082
     NYV1     YLR093C     S000004083
     GIS3     YLR094C     S000004084
     IOC2     YLR095C     S000004085
     CHA4     YLR098C     S000004088
     ICT1     YLR099C     S000004089
     SRN2     YLR119W     S000004109
     SAM1     YLR180W     S000004170
     RPL37A     YLR185W     S000004175
     RPS30A     YLR287C-A     S000004278
     IMH1     YLR309C     S000004300
     REC102     YLR329W     S000004321
     RPS1A     YLR441C     S000004433
     YPT7     YML001W     S000004460
     YMD8     YML038C     S000004502
     COG8     YML071C     S000004536
     MVP1     YMR004W     S000004606
      YMR010W     S000004612
     SOK2     YMR016C     S000004618
     PEX12     YMR026C     S000004628
     STV1     YMR054W     S000004658
     PKR1     YMR123W     S000004730
     REC114     YMR133W     S000004740
     RPL13B     YMR142C     S000004750
     YIM1     YMR152W     S000004760
      YMR157C     S000004766
     GAS3     YMR215W     S000004828
     SKY1     YMR216C     S000004829
     SCS7     YMR272C     S000004885
     COG6     YNL041C     S000004986
     YIP3     YNL044W     S000004989
      YNL058C     S000005003
     MKS1     YNL076W     S000005020
     FAR11     YNL127W     S000005071
     KEX2     YNL238W     S000005182
     GIS2     YNL255C     S000005199
      YNL296W     S000005240
     FIG4     YNL325C     S000005269
     TLG2     YOL018C     S000005378
     MDY2     YOL111C     S000005471
     RPS19A     YOL121C     S000005481
      YOL138C     S000005498
     MSA1     YOR066W     S000005592
     VAM10     YOR068C     S000005594
     VPS5     YOR069W     S000005595
     CEX1     YOR112W     S000005638
     VPH1     YOR270C     S000005796
     HSD1     YOR311C     S000005838
     TEA1     YOR337W     S000005864
     EGD1     YPL037C     S000005958
     SYH1     YPL105C     S000006026
     VPS30     YPL120W     S000006041
     GIP3     YPL137C     S000006058
     APL5     YPL195W     S000006116
     OXR1     YPL196W     S000006117
     YIG1     YPL201C     S000006122
     AFT2     YPL202C     S000006123
     TFP3     YPL234C     S000006155
     DSS4     YPR017C     S000006221
     SRO7     YPR032W     S000006236
      YPR050C     S000006254
     MRL1     YPR079W     S000006283
      YPR084W     S000006288
     MRPL51     YPR100W     S000006304
     NCA2     YPR155C     S000006359
     TPO3     YPR156C     S000006360
      YPR197C     S000006401
     DID2     YKR035W-A     S000006435
      YMR158C-A     S000007249

Enriched GO terms in this set:

GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."

    GO:0065007 (biological regulation)
    "Any process that modulates the frequency, rate or extent of any biological process, quality or function."

        GO:0065008 (regulation of biological quality)
        "Any process that modulates the frequency, rate or extent of a biological quality. A biological quality is a measurable attribute of an organism or part of an organism, such as size, mass, shape, color, etc."

            GO:0042592 (homeostatic process)
            "The biological processes involved in the maintenance of an internal equilibrium."

                GO:0048878 (chemical homeostasis)
                "The biological processes involved in the maintenance of an internal equilibrium of a chemical."

                    GO:0050801 (ion homeostasis)
                    "Any of the processes involved in the maintenance of an internal equilibrium of ions within an organism or cell."

                        GO:0055080 (cation homeostasis) [p = 0.002   (16/49: PER1; PPA1; VMA22; VMA5; VPH2; VMA10; GGC1; RAV2; VMA7; RAV1; GEF1; STV1; SKY1; VPH1; AFT2; TFP3)]
                        "The regulation of the levels, transport, and metabolism of cations."

                            GO:0055067 (monovalent inorganic cation homeostasis) [p = 0.007   (11/28: PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; TFP3)]
                            "The regulation of the levels, transport, and metabolism of monovalent inorganic cations."

                                GO:0006885 (regulation of pH) [p = 0.001   (11/23: PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; TFP3)]
                                "Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion."

                                    GO:0030641 (regulation of cellular pH) [p = 0.001   (11/22: PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; TFP3)]
                                    "The regulation of the levels, transport, and metabolism of hydrogen ions (protons) within a cell or between a cell and its external environment."

                                        GO:0051453 (regulation of intracellular pH) [p = 0.001   (11/22: PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; TFP3)]
                                        "Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion."

                                            GO:0051452 (intracellular pH reduction) [p < 0.001   (11/21: PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; TFP3)]
                                            "Any process that reduces the internal pH of a cell, measured by the concentration of the hydrogen ion."

                                                GO:0007035 (vacuolar acidification) [p < 0.001   (11/21: PPA1; VMA22; VMA5; VPH2; VMA10; RAV2; VMA7; RAV1; STV1; VPH1; TFP3)]
                                                "Any process that reduces the pH of the vacuole, measured by the concentration of the hydrogen ion."

---

GO:0008150 (biological_process)
"Those processes specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end."

    GO:0009987 (cellular process)
    "Processes that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level."

        GO:0016043 (cellular component organization and biogenesis)
        "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component; includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope."

            GO:0006996 (organelle organization and biogenesis)
            "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of any organelle within a cell."

                GO:0007033 (vacuole organization and biogenesis) [p = 0.001   (16/46: PPA1; VMA22; VMA5; VPH2; VMA10; VAM6; RAV2; VAM7; VMA7; RAV1; NYV1; YPT7; STV1; VAM10; VPH1; TFP3)]
                "A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vacuole."

---

GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."

    GO:0044464 (cell part)
    "Any constituent part of a cell, the basic structural and functional unit of all organisms."

        GO:0044424 (intracellular part)
        "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."

            GO:0005737 (cytoplasm) [p = 0.004   (124/1003: PMT2; [YBL107C]; SCO1; [YBR047W]; RER1; ILV6; [YCL056C]; MAK31; PER1; [YCR090C]; GDA1; AVT2; HPA3; GLN3; SCS2; PPA1; VMA22; TOM71; YIA6; TED1; FIS1; SEC28; COA1; MRS1; CCE1; VPS24; VMA5; TEF4; PRR1; VPH2; [YKL162C]; BCH2; GMH1; RPL40B; RIM15; BST1; VMA10; RPL2A; COX9; VAM6; RPS16B; GET3; RPL41A; RPL35A; GGC1; GSG1; ENT5; RAV2; VPS74; MRPL28; COG7; SNF4; VAM7; [YGL220W]; VMA7; CAX4; UPF3; VMA21; CHO2; PDX1; APL6; [YJL147C]; CPS1; RAV1; GEF1; [YJR056C]; MIR1; [YJR088C]; STR2; ENT4; VPS13; EMP70; CSF1; XDJ1; [YLR091W]; NYV1; GIS3; SRN2; SAM1; RPL37A; RPS30A; IMH1; RPS1A; YPT7; COG8; MVP1; [YMR010W]; PEX12; STV1; PKR1; RPL13B; YIM1; [YMR157C]; SKY1; SCS7; COG6; YIP3; [YNL058C]; KEX2; GIS2; FIG4; TLG2; MDY2; RPS19A; [YOL138C]; VAM10; VPS5; CEX1; VPH1; HSD1; EGD1; SYH1; GIP3; APL5; OXR1; YIG1; AFT2; TFP3; SRO7; MRL1; MRPL51; NCA2; TPO3; DID2)]
            "All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."

---

GO:0005575 (cellular_component)
"The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together."

    GO:0044464 (cell part)
    "Any constituent part of a cell, the basic structural and functional unit of all organisms."

        GO:0044424 (intracellular part)
        "Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm."

            GO:0044444 (cytoplasmic part) [p < 0.001   (104/753: PMT2; SCO1; [YBR047W]; RER1; ILV6; MAK31; PER1; GDA1; AVT2; GLN3; SCS2; PPA1; VMA22; TOM71; YIA6; TED1; FIS1; SEC28; COA1; MRS1; CCE1; VPS24; VMA5; TEF4; VPH2; [YKL162C]; BCH2; GMH1; RPL40B; BST1; VMA10; RPL2A; COX9; VAM6; RPS16B; GET3; RPL41A; RPL35A; GGC1; GSG1; ENT5; RAV2; MRPL28; COG7; VAM7; VMA7; CAX4; VMA21; CHO2; PDX1; APL6; [YJL147C]; CPS1; RAV1; GEF1; MIR1; [YJR088C]; ENT4; VPS13; EMP70; CSF1; XDJ1; [YLR091W]; NYV1; SRN2; RPL37A; RPS30A; IMH1; RPS1A; YPT7; COG8; PEX12; STV1; PKR1; RPL13B; YIM1; [YMR157C]; SCS7; COG6; YIP3; [YNL058C]; KEX2; FIG4; TLG2; RPS19A; [YOL138C]; VAM10; VPS5; VPH1; HSD1; EGD1; SYH1; GIP3; APL5; OXR1; YIG1; AFT2; TFP3; SRO7; MRL1; MRPL51; NCA2; TPO3; DID2)]
            "Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures."

                GO:0005773 (vacuole) [p = 0.005   (18/64: PER1; PPA1; VMA5; VMA10; VAM6; VAM7; VMA7; CPS1; NYV1; YPT7; STV1; [YNL058C]; FIG4; [YOL138C]; VAM10; VPH1; TFP3; TPO3)]
                "A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol."

---